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The map label for this gene is ywdJ [H]

Identifier: 227817271

GI number: 227817271

Start: 4298188

End: 4299501

Strand: Reverse

Name: ywdJ [H]

Synonym: BAMEG_4761

Alternate gene names: 227817271

Gene position: 4299501-4298188 (Counterclockwise)

Preceding gene: 227817272

Following gene: 227817270

Centisome position: 82.21

GC content: 35.84

Gene sequence:

>1314_bases
GTGAAATATATGGAAGGGATGAAAAATTTGGACAATCAACATAACCAAAATCATATTATGGGAACTTTGCAATGGTTTAT
ATTTTTATTAGCGAATTCAATCGCATTACCAATTGTCGTTGGCGGATTATTTCATCTTACGACGGAAGAAATATTTTATT
TAATGCAGCGTACATTTTTTGTAGTTGGTATATCTTCTTTTTTACAAGGATGGCTTGGACATAGACTCCCAATTGCGGAC
GGACCAGCTGGATCTTGGGTTGGCGTATTTACTGTACTTGCTTACGCAACGGCCGGACAAGATCAATTACATAGTACGTT
GCAAATTTTAGAATTAGGAATGATAATTTCCGGTGTTATTTTAATAGGATTAGGCGTAACAGGTTTTATCGGACGTATTT
TATTTTTATTTACGCCGATTGTGACAGGGACGTTTTTACTTTTATTATGTTTACAATTAAGCGGTGTATTCCTAAAAGGG
ATGTTAGGAATTACTGCTACTGCTTCTCAAATTGATGGATTTACAGCGATAATTGCGTTTAGTATATTTCTTTTCGTTAT
TATACTATCTAATTTTGGAAAAGGTTTTGTCAAAAGTTATGCGGTTTTAATAGGATTAATTAGTGGGTGGATTCTTTTTC
TAATTGCAGGAAAAGTGACGATTTCATCTCAAGTAACTCATTTTGTGCAACTTCCGCAAATATTTGCTTGGGGACTTCCA
AAATGGAATACAGGTATGGCGGTATCAAGTTTCGTTATGGTATGTATTTTAGTTTCAAATACAGTGGCAGCTATTATTGC
AATTAATCAAGCTACTATTCAAAAAGGGACTATTGAGCAGAAACAGTTGAAGGATGGTACGTGGGTTGGAGGCATTTCGC
ATATCATTTCTTCTGTATTTTCAACTGTAGGTGTCGTGCCGTTACCGGCAACGGCAGGATTTATACGTTTAACGAAACAA
AAATATATACGATCGTTCTTACTAGCATGTATGTTACTAGTCGTAATGTCGCTGTTTCCAAGTATTATTCGTTATTTAGC
ATCTTTACCATCCGCTGTTGCATCTGCGGTTTTAATGGCTTCTTTCGTACAGTTAATTGGAATTGGGTTAAATAATATAA
AACAAGTGGAGCTTAATGAAAGGAATGTAACAATTTTAGGCGTTGCAGTATTATTTGGCAGCGGCGTTATGTTTTTACCG
TCTGGAGCGCTCCAGTCCTTGCCGTCTGTTATGCAATATATATTCGGGAATGGTTTATTTGTAGGTACTGTTGTAAGTAT
ATTGCTAGAACAAATATGGCGTATCGGGAAATAA

Upstream 100 bases:

>100_bases
TTGTGGAGTTTACACTGCAACATTTGGATACGGGAAGAAATCGAAAGGACAAAAAGAGTTGTTTCGAAAAGCTACGTAAT
AGTATAGCGTGTATTTCTGT

Downstream 100 bases:

>100_bases
GTGGATACAAAGAGTGTACGCACTGTATAAAAGTCTAAAATAACATGTGAAATAAAGCCCATTTTCATTCACCACCCGCA
CATTTCGTTCATACAATATC

Product: xanthine/uracil permease family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 437

Protein sequence:

>437_residues
MKYMEGMKNLDNQHNQNHIMGTLQWFIFLLANSIALPIVVGGLFHLTTEEIFYLMQRTFFVVGISSFLQGWLGHRLPIAD
GPAGSWVGVFTVLAYATAGQDQLHSTLQILELGMIISGVILIGLGVTGFIGRILFLFTPIVTGTFLLLLCLQLSGVFLKG
MLGITATASQIDGFTAIIAFSIFLFVIILSNFGKGFVKSYAVLIGLISGWILFLIAGKVTISSQVTHFVQLPQIFAWGLP
KWNTGMAVSSFVMVCILVSNTVAAIIAINQATIQKGTIEQKQLKDGTWVGGISHIISSVFSTVGVVPLPATAGFIRLTKQ
KYIRSFLLACMLLVVMSLFPSIIRYLASLPSAVASAVLMASFVQLIGIGLNNIKQVELNERNVTILGVAVLFGSGVMFLP
SGALQSLPSVMQYIFGNGLFVGTVVSILLEQIWRIGK

Sequences:

>Translated_437_residues
MKYMEGMKNLDNQHNQNHIMGTLQWFIFLLANSIALPIVVGGLFHLTTEEIFYLMQRTFFVVGISSFLQGWLGHRLPIAD
GPAGSWVGVFTVLAYATAGQDQLHSTLQILELGMIISGVILIGLGVTGFIGRILFLFTPIVTGTFLLLLCLQLSGVFLKG
MLGITATASQIDGFTAIIAFSIFLFVIILSNFGKGFVKSYAVLIGLISGWILFLIAGKVTISSQVTHFVQLPQIFAWGLP
KWNTGMAVSSFVMVCILVSNTVAAIIAINQATIQKGTIEQKQLKDGTWVGGISHIISSVFSTVGVVPLPATAGFIRLTKQ
KYIRSFLLACMLLVVMSLFPSIIRYLASLPSAVASAVLMASFVQLIGIGLNNIKQVELNERNVTILGVAVLFGSGVMFLP
SGALQSLPSVMQYIFGNGLFVGTVVSILLEQIWRIGK
>Mature_437_residues
MKYMEGMKNLDNQHNQNHIMGTLQWFIFLLANSIALPIVVGGLFHLTTEEIFYLMQRTFFVVGISSFLQGWLGHRLPIAD
GPAGSWVGVFTVLAYATAGQDQLHSTLQILELGMIISGVILIGLGVTGFIGRILFLFTPIVTGTFLLLLCLQLSGVFLKG
MLGITATASQIDGFTAIIAFSIFLFVIILSNFGKGFVKSYAVLIGLISGWILFLIAGKVTISSQVTHFVQLPQIFAWGLP
KWNTGMAVSSFVMVCILVSNTVAAIIAINQATIQKGTIEQKQLKDGTWVGGISHIISSVFSTVGVVPLPATAGFIRLTKQ
KYIRSFLLACMLLVVMSLFPSIIRYLASLPSAVASAVLMASFVQLIGIGLNNIKQVELNERNVTILGVAVLFGSGVMFLP
SGALQSLPSVMQYIFGNGLFVGTVVSILLEQIWRIGK

Specific function: Unknown

COG id: COG2233

COG function: function code F; Xanthine/uracil permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xanthine/uracil permease family. Nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) subfamily [H]

Homologues:

Organism=Escherichia coli, GI87081750, Length=427, Percent_Identity=25.7611241217799, Blast_Score=146, Evalue=3e-36,
Organism=Escherichia coli, GI87082181, Length=418, Percent_Identity=20.5741626794258, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006042
- InterPro:   IPR006043 [H]

Pfam domain/function: PF00860 Xan_ur_permease [H]

EC number: NA

Molecular weight: Translated: 47245; Mature: 47245

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKYMEGMKNLDNQHNQNHIMGTLQWFIFLLANSIALPIVVGGLFHLTTEEIFYLMQRTFF
CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVGISSFLQGWLGHRLPIADGPAGSWVGVFTVLAYATAGQDQLHSTLQILELGMIISGVI
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
LIGLGVTGFIGRILFLFTPIVTGTFLLLLCLQLSGVFLKGMLGITATASQIDGFTAIIAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
SIFLFVIILSNFGKGFVKSYAVLIGLISGWILFLIAGKVTISSQVTHFVQLPQIFAWGLP
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC
KWNTGMAVSSFVMVCILVSNTVAAIIAINQATIQKGTIEQKQLKDGTWVGGISHIISSVF
CCCCCHHHHHHHHHHHHHHHHHHHHHEECHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHH
STVGVVPLPATAGFIRLTKQKYIRSFLLACMLLVVMSLFPSIIRYLASLPSAVASAVLMA
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFVQLIGIGLNNIKQVELNERNVTILGVAVLFGSGVMFLPSGALQSLPSVMQYIFGNGLF
HHHHHHHCCCCCCEEEEECCCCEEHEEHHHHHCCCCEEECCHHHHHHHHHHHHHHCCCHH
VGTVVSILLEQIWRIGK
HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]