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The map label for this gene is pbpX [H]

Identifier: 227816628

GI number: 227816628

Start: 3742258

End: 3743256

Strand: Reverse

Name: pbpX [H]

Synonym: BAMEG_4106

Alternate gene names: 227816628

Gene position: 3743256-3742258 (Counterclockwise)

Preceding gene: 227816629

Following gene: 227816627

Centisome position: 71.57

GC content: 34.23

Gene sequence:

>999_bases
ATGGATCAGGAAAAAAATAATGCGAATGGGAAATCACGTCGGCCGATTGTATACATAAAAAGAACAATCATTCTCGTCTT
ACTATTTTCACTTGTATATTTCATGTATACAAAAATTGTTACGCATAATAAGAAAGAAGAAATTTTAAAAGCGGCAGAAA
TGAAGAAGCAAGAAGAGCTAAAAAAGAAAGAAGAAAAAAAGAAGCAAGAAGCACAAAAACAAAAAGAGCAGGAAGAACAA
GTGAAGCAAGCACAAGCTGCAGAACAGCCTGCTGAGGGACCACCTCAAGAAATTAATGAAAACGCTCAATTAGATCAATA
TTTACAAAACATAGGATTTAGCGGGACAGCGGTTATTGTGAAGAACGGAAAAGTTCTTGTGAATAAAGGATATGGTATGG
CGAATAAAGAGAAACAAGTACCGAATAATTCAGAGACAACTTTTTATATTGGTTCTATTTCAAAGGCGTTTGTAGCGACT
GCTATTATGCAATTAAAAGATCAACATAAATTAAATGTAGAGGATACGATTGCGAAGTATATTCCAGATTTCCCTCAAGG
TAATAGTATTCAGTTAAAACATTTATTAACACATACATCAGGAATTCCGGAGTACGAGCAGGGAGCAGAGGATATTTCTC
ATGAAGAATTGATAAAACGAATAGGAAAGCAAAAGCGCATTGGAAGTCCAGGAGAGAAATGGAAGTATTCCGATTCTAAC
TATTCGATACTTGCCTATATTGCTGAGAAGGTAAGCGGACAACCGTTAGAAGAGTATATTAAACAACATATTTTTGCACC
TGCTGGTATGAAACATTCTGGTTTTGGTAGAGAGCTAGAACAAACAAGATTTCCATCGACAGGTTATAAAATAGTAAATA
ACAATATGACAACACCTAATATTCCAAGTATGTCACAACTATATGGTTGTGGTGATATATATATACAAGTGCACATGATT
TATATTTATTTAATGAAGCACTTTTCTCTGGAAAGTTAA

Upstream 100 bases:

>100_bases
ATAAAGTAGGGATGACATAGAATGGATTATCCATAATCTACTAAAATGAGTCTTTAGTAAAGGTAGTAAATTATTGGTGA
ATAAGGGGAAAAAAGCAATC

Downstream 100 bases:

>100_bases
TTTCAAAAGAAAGCTACGATCAAATGTTTACAGGCGGAAAAAAAGATTACGGGTTTGGATGGTACGTAGACCCGGGAAGT
TATTCGAATCACGGTGTAAT

Product: putative penicillin-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MDQEKNNANGKSRRPIVYIKRTIILVLLFSLVYFMYTKIVTHNKKEEILKAAEMKKQEELKKKEEKKKQEAQKQKEQEEQ
VKQAQAAEQPAEGPPQEINENAQLDQYLQNIGFSGTAVIVKNGKVLVNKGYGMANKEKQVPNNSETTFYIGSISKAFVAT
AIMQLKDQHKLNVEDTIAKYIPDFPQGNSIQLKHLLTHTSGIPEYEQGAEDISHEELIKRIGKQKRIGSPGEKWKYSDSN
YSILAYIAEKVSGQPLEEYIKQHIFAPAGMKHSGFGRELEQTRFPSTGYKIVNNNMTTPNIPSMSQLYGCGDIYIQVHMI
YIYLMKHFSLES

Sequences:

>Translated_332_residues
MDQEKNNANGKSRRPIVYIKRTIILVLLFSLVYFMYTKIVTHNKKEEILKAAEMKKQEELKKKEEKKKQEAQKQKEQEEQ
VKQAQAAEQPAEGPPQEINENAQLDQYLQNIGFSGTAVIVKNGKVLVNKGYGMANKEKQVPNNSETTFYIGSISKAFVAT
AIMQLKDQHKLNVEDTIAKYIPDFPQGNSIQLKHLLTHTSGIPEYEQGAEDISHEELIKRIGKQKRIGSPGEKWKYSDSN
YSILAYIAEKVSGQPLEEYIKQHIFAPAGMKHSGFGRELEQTRFPSTGYKIVNNNMTTPNIPSMSQLYGCGDIYIQVHMI
YIYLMKHFSLES
>Mature_332_residues
MDQEKNNANGKSRRPIVYIKRTIILVLLFSLVYFMYTKIVTHNKKEEILKAAEMKKQEELKKKEEKKKQEAQKQKEQEEQ
VKQAQAAEQPAEGPPQEINENAQLDQYLQNIGFSGTAVIVKNGKVLVNKGYGMANKEKQVPNNSETTFYIGSISKAFVAT
AIMQLKDQHKLNVEDTIAKYIPDFPQGNSIQLKHLLTHTSGIPEYEQGAEDISHEELIKRIGKQKRIGSPGEKWKYSDSN
YSILAYIAEKVSGQPLEEYIKQHIFAPAGMKHSGFGRELEQTRFPSTGYKIVNNNMTTPNIPSMSQLYGCGDIYIQVHMI
YIYLMKHFSLES

Specific function: Unknown

COG id: COG1680

COG function: function code V; Beta-lactamase class C and other penicillin binding proteins

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential). Note=Localizes to the division septum during vegetative growth, and accumulates at the prespore during sporulation [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the beta-lactamase family [H]

Homologues:

Organism=Escherichia coli, GI87082101, Length=227, Percent_Identity=29.9559471365639, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1786574, Length=196, Percent_Identity=26.0204081632653, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1790593, Length=145, Percent_Identity=26.8965517241379, Blast_Score=62, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17550934, Length=188, Percent_Identity=28.1914893617021, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001466 [H]

Pfam domain/function: PF00144 Beta-lactamase [H]

EC number: NA

Molecular weight: Translated: 37881; Mature: 37881

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQEKNNANGKSRRPIVYIKRTIILVLLFSLVYFMYTKIVTHNKKEEILKAAEMKKQEEL
CCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
KKKEEKKKQEAQKQKEQEEQVKQAQAAEQPAEGPPQEINENAQLDQYLQNIGFSGTAVIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHCCCCCEEEEE
KNGKVLVNKGYGMANKEKQVPNNSETTFYIGSISKAFVATAIMQLKDQHKLNVEDTIAKY
ECCEEEEECCCCCCCCHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHH
IPDFPQGNSIQLKHLLTHTSGIPEYEQGAEDISHEELIKRIGKQKRIGSPGEKWKYSDSN
CCCCCCCCCEEHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
YSILAYIAEKVSGQPLEEYIKQHIFAPAGMKHSGFGRELEQTRFPSTGYKIVNNNMTTPN
CHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCEEECCCCCCCC
IPSMSQLYGCGDIYIQVHMIYIYLMKHFSLES
CCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDQEKNNANGKSRRPIVYIKRTIILVLLFSLVYFMYTKIVTHNKKEEILKAAEMKKQEEL
CCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
KKKEEKKKQEAQKQKEQEEQVKQAQAAEQPAEGPPQEINENAQLDQYLQNIGFSGTAVIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHCCCCCEEEEE
KNGKVLVNKGYGMANKEKQVPNNSETTFYIGSISKAFVATAIMQLKDQHKLNVEDTIAKY
ECCEEEEECCCCCCCCHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHH
IPDFPQGNSIQLKHLLTHTSGIPEYEQGAEDISHEELIKRIGKQKRIGSPGEKWKYSDSN
CCCCCCCCCEEHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
YSILAYIAEKVSGQPLEEYIKQHIFAPAGMKHSGFGRELEQTRFPSTGYKIVNNNMTTPN
CHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCEEECCCCCCCC
IPSMSQLYGCGDIYIQVHMIYIYLMKHFSLES
CCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]