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The map label for this gene is ycdQ [C]

Identifier: 227816624

GI number: 227816624

Start: 3739689

End: 3741269

Strand: Reverse

Name: ycdQ [C]

Synonym: BAMEG_4102

Alternate gene names: 227816624

Gene position: 3741269-3739689 (Counterclockwise)

Preceding gene: 227816625

Following gene: 227816623

Centisome position: 71.53

GC content: 35.74

Gene sequence:

>1581_bases
ATGTTCGCTTGGAAGGGTAAGCGTGATAAAAGTATGAAAGTATCAGTTGTTATTCCAGTGCATAATGAGGCAAGTACTTT
ATCAAAAGTTTTAGCAGAAGTAAAAAAGTTAGAACCATATGAAATTATCATAGTAGATAATGGATCGACCGATGGGACAA
AAGAAATAGCATTACAACATCATTGCCGTGTGATTTATTATAATCATTCTCTTGGTAATGATGTGGGACGGGCAATTGGC
GCTAGAGAAGCAAAAGGTGAAATTGTCTTATTTTTAGACGGTGATATCGTCATGAAAAGTGAAGAATTATATCCTTTTAT
TAAAGGAATACAGCAAGGACATCAAATTGTTTTGAATAACTTAACATGGTCTGTTTATTTAAAAGTACGACCGCATTATA
CGACGGTTGGAAAATATATGTTAAATCGTTATTTGAACAAGAAAGAATTTGTTGTAGGGTCTTTAATTGCGATACCACAT
GCAATTAGTCGTGAAGTGATTGAAAAACTGGGGTGGTGGAATTTAGCAGATCCAGCATTATTTCAAGCGATGGCGATGTC
TAGAGGAGTAGATATTTCAGATATGGCTTCAGTTGATGTAATATACACAAATAAAGTTCGTCCTGTTCATACGGGCACAT
CACCTGATTCTCCTTATCCTAAAGCGACTAGTCGTATTATGGGCGATCATTTACGTGCTTTGCAATATATAACTGAAACA
TATGGTAAACGCGGTGGTTTTTCGGAGGGAAATAGAGATAGAGAGTTTATAGGGAAATATAAACCAGTTGTATTAAAAAA
GGAAAAAGCGAAATACAGTGCGATTATACCAGTGTCAGAAGAAAAAACGACTATAAGATCTGTTATACAAGAAGTAAAAA
AAGCAGGAGTAGATGAAATTATTATTGTTGCGAATGGAGCAGATATTGAGACTATTAAACAAGTAAACCTAGAGAATGTT
ATTGTTGTTGAAGTTACGAAGACGCTTGGAAACAATGTAGCACGAGCGATAGGTGCCATGCATGCTACAGCAGAGATTTG
TTTATTCGTTGATGGAGATTATGCTATTCCGGCAAAAAAACTAGTTCCATTTTTGCGTGCTATTGAAGATGGAAGTGATA
TGGCATTAAATGATTTGCAGTGTTTATTAGATATATTTCATCCAGCAGATCCAATTAGTATGGGAAAATACTTTGTGAAT
TTGGTAGCGAAACGACCAGATTTATGGAATAACTCACTAACAGCAGTACCACATGCCATCCGTAAGAAGGTAATAGAGAA
AATAGGATATGACTCTCTTATCATTCCGCCATTAGCACAAATGAAAGCTATTTTAGAAGGGTTCTCTATTACAACCGTTG
AGTTTGTAGATGTTATAAAAACAAATCGAGTACGTCCAGAGCAACATGAATTTGTAAATGGGCGCATTTCAGCATTTGAC
CGTATTTTCGGTGACCAACTTGAGGCGATTGCATATTTATTACAACATACAGACGAACGCGGAGGTTTTACAGATGGAGA
TAGAGATAGAGAAATAATTCAACAATTGAGAAGGGAAGAAGAGAATACAAATGAATACTAG

Upstream 100 bases:

>100_bases
GGTGTGCTTTTATCTGTGACAGATGGAGCAGTAAGCGTTCGTACTTCTCCTTCCTATGGACCACCGGAAGATGTAATTGT
ACGTATTCCTGTTATTGCCT

Downstream 100 bases:

>100_bases
TCGTAAAGTAGCTATCATTGGATTAGGGTATGTTGGTCTTCCTTTAGCGGTCCATCTTGCAGAAAGGGGCCATACTGTAC
TTGGACTAGACAAAGATACT

Product: glycosyl transferase, group 2 family protein

Products: NA

Alternate protein names: Glycosyl Transferase Family Protein; Glycosyltransferase/Glycosyltransferase; Glycosyltransferase; Cell Wall Biosynthesis Glycosyltransferase; Sugar Transferase; Glycosyltransferase Involved In Cell Wall Biogenesis; Family 2 Glycosyl Transferase; Glycosyl Transferase Domain-Containing Protein

Number of amino acids: Translated: 526; Mature: 526

Protein sequence:

>526_residues
MFAWKGKRDKSMKVSVVIPVHNEASTLSKVLAEVKKLEPYEIIIVDNGSTDGTKEIALQHHCRVIYYNHSLGNDVGRAIG
AREAKGEIVLFLDGDIVMKSEELYPFIKGIQQGHQIVLNNLTWSVYLKVRPHYTTVGKYMLNRYLNKKEFVVGSLIAIPH
AISREVIEKLGWWNLADPALFQAMAMSRGVDISDMASVDVIYTNKVRPVHTGTSPDSPYPKATSRIMGDHLRALQYITET
YGKRGGFSEGNRDREFIGKYKPVVLKKEKAKYSAIIPVSEEKTTIRSVIQEVKKAGVDEIIIVANGADIETIKQVNLENV
IVVEVTKTLGNNVARAIGAMHATAEICLFVDGDYAIPAKKLVPFLRAIEDGSDMALNDLQCLLDIFHPADPISMGKYFVN
LVAKRPDLWNNSLTAVPHAIRKKVIEKIGYDSLIIPPLAQMKAILEGFSITTVEFVDVIKTNRVRPEQHEFVNGRISAFD
RIFGDQLEAIAYLLQHTDERGGFTDGDRDREIIQQLRREEENTNEY

Sequences:

>Translated_526_residues
MFAWKGKRDKSMKVSVVIPVHNEASTLSKVLAEVKKLEPYEIIIVDNGSTDGTKEIALQHHCRVIYYNHSLGNDVGRAIG
AREAKGEIVLFLDGDIVMKSEELYPFIKGIQQGHQIVLNNLTWSVYLKVRPHYTTVGKYMLNRYLNKKEFVVGSLIAIPH
AISREVIEKLGWWNLADPALFQAMAMSRGVDISDMASVDVIYTNKVRPVHTGTSPDSPYPKATSRIMGDHLRALQYITET
YGKRGGFSEGNRDREFIGKYKPVVLKKEKAKYSAIIPVSEEKTTIRSVIQEVKKAGVDEIIIVANGADIETIKQVNLENV
IVVEVTKTLGNNVARAIGAMHATAEICLFVDGDYAIPAKKLVPFLRAIEDGSDMALNDLQCLLDIFHPADPISMGKYFVN
LVAKRPDLWNNSLTAVPHAIRKKVIEKIGYDSLIIPPLAQMKAILEGFSITTVEFVDVIKTNRVRPEQHEFVNGRISAFD
RIFGDQLEAIAYLLQHTDERGGFTDGDRDREIIQQLRREEENTNEY
>Mature_526_residues
MFAWKGKRDKSMKVSVVIPVHNEASTLSKVLAEVKKLEPYEIIIVDNGSTDGTKEIALQHHCRVIYYNHSLGNDVGRAIG
AREAKGEIVLFLDGDIVMKSEELYPFIKGIQQGHQIVLNNLTWSVYLKVRPHYTTVGKYMLNRYLNKKEFVVGSLIAIPH
AISREVIEKLGWWNLADPALFQAMAMSRGVDISDMASVDVIYTNKVRPVHTGTSPDSPYPKATSRIMGDHLRALQYITET
YGKRGGFSEGNRDREFIGKYKPVVLKKEKAKYSAIIPVSEEKTTIRSVIQEVKKAGVDEIIIVANGADIETIKQVNLENV
IVVEVTKTLGNNVARAIGAMHATAEICLFVDGDYAIPAKKLVPFLRAIEDGSDMALNDLQCLLDIFHPADPISMGKYFVN
LVAKRPDLWNNSLTAVPHAIRKKVIEKIGYDSLIIPPLAQMKAILEGFSITTVEFVDVIKTNRVRPEQHEFVNGRISAFD
RIFGDQLEAIAYLLQHTDERGGFTDGDRDREIIQQLRREEENTNEY

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59064; Mature: 59064

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAWKGKRDKSMKVSVVIPVHNEASTLSKVLAEVKKLEPYEIIIVDNGSTDGTKEIALQH
CCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHH
HCRVIYYNHSLGNDVGRAIGAREAKGEIVLFLDGDIVMKSEELYPFIKGIQQGHQIVLNN
CEEEEEEECCCCCHHHHHHCCCCCCCCEEEEECCCEEEECHHHHHHHHHHHCCCEEEEEC
LTWSVYLKVRPHYTTVGKYMLNRYLNKKEFVVGSLIAIPHAISREVIEKLGWWNLADPAL
CEEEEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
FQAMAMSRGVDISDMASVDVIYTNKVRPVHTGTSPDSPYPKATSRIMGDHLRALQYITET
HHHHHHHCCCCHHHHCCEEEEEECCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
YGKRGGFSEGNRDREFIGKYKPVVLKKEKAKYSAIIPVSEEKTTIRSVIQEVKKAGVDEI
HCCCCCCCCCCCCHHHHHCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEE
IIVANGADIETIKQVNLENVIVVEVTKTLGNNVARAIGAMHATAEICLFVDGDYAIPAKK
EEEECCCCHHHHHHCCCCCEEEEEEHHHHCHHHHHHHHHHHCEEEEEEEECCCCCCCHHH
LVPFLRAIEDGSDMALNDLQCLLDIFHPADPISMGKYFVNLVAKRPDLWNNSLTAVPHAI
HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
RKKVIEKIGYDSLIIPPLAQMKAILEGFSITTVEFVDVIKTNRVRPEQHEFVNGRISAFD
HHHHHHHCCCCCEECCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHCCHHHHHH
RIFGDQLEAIAYLLQHTDERGGFTDGDRDREIIQQLRREEENTNEY
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MFAWKGKRDKSMKVSVVIPVHNEASTLSKVLAEVKKLEPYEIIIVDNGSTDGTKEIALQH
CCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHH
HCRVIYYNHSLGNDVGRAIGAREAKGEIVLFLDGDIVMKSEELYPFIKGIQQGHQIVLNN
CEEEEEEECCCCCHHHHHHCCCCCCCCEEEEECCCEEEECHHHHHHHHHHHCCCEEEEEC
LTWSVYLKVRPHYTTVGKYMLNRYLNKKEFVVGSLIAIPHAISREVIEKLGWWNLADPAL
CEEEEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
FQAMAMSRGVDISDMASVDVIYTNKVRPVHTGTSPDSPYPKATSRIMGDHLRALQYITET
HHHHHHHCCCCHHHHCCEEEEEECCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
YGKRGGFSEGNRDREFIGKYKPVVLKKEKAKYSAIIPVSEEKTTIRSVIQEVKKAGVDEI
HCCCCCCCCCCCCHHHHHCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEE
IIVANGADIETIKQVNLENVIVVEVTKTLGNNVARAIGAMHATAEICLFVDGDYAIPAKK
EEEECCCCHHHHHHCCCCCEEEEEEHHHHCHHHHHHHHHHHCEEEEEEEECCCCCCCHHH
LVPFLRAIEDGSDMALNDLQCLLDIFHPADPISMGKYFVNLVAKRPDLWNNSLTAVPHAI
HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
RKKVIEKIGYDSLIIPPLAQMKAILEGFSITTVEFVDVIKTNRVRPEQHEFVNGRISAFD
HHHHHHHCCCCCEECCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHCCHHHHHH
RIFGDQLEAIAYLLQHTDERGGFTDGDRDREIIQQLRREEENTNEY
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA