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The map label for this gene is ycdQ [C]

Identifier: 227816620

GI number: 227816620

Start: 3735957

End: 3737501

Strand: Reverse

Name: ycdQ [C]

Synonym: BAMEG_4098

Alternate gene names: 227816620

Gene position: 3737501-3735957 (Counterclockwise)

Preceding gene: 227816621

Following gene: 227816619

Centisome position: 71.46

GC content: 36.89

Gene sequence:

>1545_bases
ATGGCTAAGTCATTATCTGTTATTATTCCTGCATGGAATGAAATCGATACGATTTCAGACGTTATTCAATCGGTAAAAGG
ATTAAATCCATTAGAGATTATTGTAGTAGCAAATGGTTGTACTGATGGTACAGAAACAGTTGCTGAGCATTTAGGATGTA
AAGTACTGCGGTATACAGAAAAGCTTGGAAATGATGTTGGACGTGCAGCTGGTGCCAAAGAATCTATAGGTGATGTACTA
CTATTTATAGATGGCGATTTTGCTATTCAAACTTCAAAATTACAGTTATTTCTTAATCCGATTTTATACAATCAGGCAGA
TGTAGTTTTAAATAATTTGGACGCATTATTTTTAAAAAGGCAAAAACCTAATTCTATTACAGTATGGCGCCAAATATTAA
ATTCAATATTAGAGCGTGAAGAGTTAAAAATTGATTCTTTATTAGCTGTACCTCATGCGTTGACGAAAGAAGTTGTTCAA
AGTATTGGATATGAATGTTTTGTTAATCCTATTCTCGCTCATTTACGTCTAGTTCAAGGCAAATGGAGAATTAGTCGACA
TTGTGCAATTGACGTTATTACGCCAAATAAATTTCGGCCGACAGAGCATGCTGCGTATGGCACAGATCTTTCTCCTTCTG
AAAAACGGATGATAGGTGACCATATAGAAGCTGTAGCAGAGCGAATAGTAGGTAGCGATGAGCGCGGAGGGTATTGTGAT
GGAAATAGGAAAAGAGATAGTGTCTATCATACTTTAGATTTTGAAGATTTTTATCAAGGATGGGGCGTTACATCTAATTT
GTATAAGGGAAAGCAATTATCGGTCATTATTCCTGTACAAGATGAAGAGAAAACAATTGGAAACGTTATAGAAGAGCTTC
GCAAGATTGAACCTTTTGAAATTATCGTTGTTGTAAATGGTTCGTCCGATCAAACGGCGACAATTGCAAAAGACAAGGGA
GCAACGACAATTGTATATAAAGAAGCACTTGGAAATGATGTGGGGCGCTCACTTGGAACGTATTTTGCAAAAGGAGAAAT
TGTGTTATTTATAGACGGCGATTTTGTTATTCCAGCGAGCGAGCTATATCCTTTTGCGAAAGCCATTGCAGATGGGACAG
ATGTTGCATTAAATGATCTAAATCATTATTTGGATTTAAGAGTACCGCTTCATCTTGTAACTGCATTTAAATATGCATTA
AATTTAGCTTGTGATAGAAAAGATCTAGGCGTAGGCTCACTTATCGCTGTACCGAATGCGTTTAGCCGTAAGTGTTTGAA
ACAAATTGGGTATAGATCTTTATTGGCGCCGTGTGTAGCCCAAGTGAAAGCTATTCTTTCAGGATTTGAAGTTGCATGTG
TAAGTCGTGTTGAGGTCGATAAGATGAACCGTATTCGTCCCAGTGAACATTTTGCTAAAATAGGTCATCCACCAGCTGTA
CTTCGAATTATAGGTGACCATATAGAAGGATTAGAGCAATTAATTGGATTAACAGGCAGTCGTGGTGGATTCCATGATGG
AAATAGAAAAAGAGATATTTTATAG

Upstream 100 bases:

>100_bases
CCAGACGTAACAAAATTAAAAGATCTTGTTCAATTTCAGGCGAAAGTAACGTGGGAAGACGGATTGAAGGAAACAATTAA
GTGGTTTCGTGAAGAAGACA

Downstream 100 bases:

>100_bases
GTAACAAAAAAGTGTACAACATATGTACACTTTTTTGTTCTGTTATAAAAACTATAACAGATTAGGAGATAAGAGTATTA
CAGCTCTACAATGGGTATTG

Product: glycosyl transferase, group 2 family protein

Products: NA

Alternate protein names: Glycosyl Transferase Group 2 Family Protein; Cell Wall Biosynthesis Glycosyltransferase; Glycosyltransferase/Glycosyltransferase; Glycosyltransferase; Dolichyl-Phosphate Mannoosyltransferase Related Protein; Glycosyltransferase Involved In Cell Wall Biogenesis; Family 2 Glycosyl Transferase; Glycosyl Transferase; Glycosyl Transferase Domain-Containing Protein

Number of amino acids: Translated: 514; Mature: 513

Protein sequence:

>514_residues
MAKSLSVIIPAWNEIDTISDVIQSVKGLNPLEIIVVANGCTDGTETVAEHLGCKVLRYTEKLGNDVGRAAGAKESIGDVL
LFIDGDFAIQTSKLQLFLNPILYNQADVVLNNLDALFLKRQKPNSITVWRQILNSILEREELKIDSLLAVPHALTKEVVQ
SIGYECFVNPILAHLRLVQGKWRISRHCAIDVITPNKFRPTEHAAYGTDLSPSEKRMIGDHIEAVAERIVGSDERGGYCD
GNRKRDSVYHTLDFEDFYQGWGVTSNLYKGKQLSVIIPVQDEEKTIGNVIEELRKIEPFEIIVVVNGSSDQTATIAKDKG
ATTIVYKEALGNDVGRSLGTYFAKGEIVLFIDGDFVIPASELYPFAKAIADGTDVALNDLNHYLDLRVPLHLVTAFKYAL
NLACDRKDLGVGSLIAVPNAFSRKCLKQIGYRSLLAPCVAQVKAILSGFEVACVSRVEVDKMNRIRPSEHFAKIGHPPAV
LRIIGDHIEGLEQLIGLTGSRGGFHDGNRKRDIL

Sequences:

>Translated_514_residues
MAKSLSVIIPAWNEIDTISDVIQSVKGLNPLEIIVVANGCTDGTETVAEHLGCKVLRYTEKLGNDVGRAAGAKESIGDVL
LFIDGDFAIQTSKLQLFLNPILYNQADVVLNNLDALFLKRQKPNSITVWRQILNSILEREELKIDSLLAVPHALTKEVVQ
SIGYECFVNPILAHLRLVQGKWRISRHCAIDVITPNKFRPTEHAAYGTDLSPSEKRMIGDHIEAVAERIVGSDERGGYCD
GNRKRDSVYHTLDFEDFYQGWGVTSNLYKGKQLSVIIPVQDEEKTIGNVIEELRKIEPFEIIVVVNGSSDQTATIAKDKG
ATTIVYKEALGNDVGRSLGTYFAKGEIVLFIDGDFVIPASELYPFAKAIADGTDVALNDLNHYLDLRVPLHLVTAFKYAL
NLACDRKDLGVGSLIAVPNAFSRKCLKQIGYRSLLAPCVAQVKAILSGFEVACVSRVEVDKMNRIRPSEHFAKIGHPPAV
LRIIGDHIEGLEQLIGLTGSRGGFHDGNRKRDIL
>Mature_513_residues
AKSLSVIIPAWNEIDTISDVIQSVKGLNPLEIIVVANGCTDGTETVAEHLGCKVLRYTEKLGNDVGRAAGAKESIGDVLL
FIDGDFAIQTSKLQLFLNPILYNQADVVLNNLDALFLKRQKPNSITVWRQILNSILEREELKIDSLLAVPHALTKEVVQS
IGYECFVNPILAHLRLVQGKWRISRHCAIDVITPNKFRPTEHAAYGTDLSPSEKRMIGDHIEAVAERIVGSDERGGYCDG
NRKRDSVYHTLDFEDFYQGWGVTSNLYKGKQLSVIIPVQDEEKTIGNVIEELRKIEPFEIIVVVNGSSDQTATIAKDKGA
TTIVYKEALGNDVGRSLGTYFAKGEIVLFIDGDFVIPASELYPFAKAIADGTDVALNDLNHYLDLRVPLHLVTAFKYALN
LACDRKDLGVGSLIAVPNAFSRKCLKQIGYRSLLAPCVAQVKAILSGFEVACVSRVEVDKMNRIRPSEHFAKIGHPPAVL
RIIGDHIEGLEQLIGLTGSRGGFHDGNRKRDIL

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56638; Mature: 56507

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKSLSVIIPAWNEIDTISDVIQSVKGLNPLEIIVVANGCTDGTETVAEHLGCKVLRYTE
CCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCHHHHHHH
KLGNDVGRAAGAKESIGDVLLFIDGDFAIQTSKLQLFLNPILYNQADVVLNNLDALFLKR
HHCHHHHHHCCCCCCCCCEEEEEECCEEEEHHHHHEEEHHHHHCCHHHHHHCCHHHHEEC
QKPNSITVWRQILNSILEREELKIDSLLAVPHALTKEVVQSIGYECFVNPILAHLRLVQG
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
KWRISRHCAIDVITPNKFRPTEHAAYGTDLSPSEKRMIGDHIEAVAERIVGSDERGGYCD
CEEEECCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
GNRKRDSVYHTLDFEDFYQGWGVTSNLYKGKQLSVIIPVQDEEKTIGNVIEELRKIEPFE
CCCCCCCEEEECCHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCEE
IIVVVNGSSDQTATIAKDKGATTIVYKEALGNDVGRSLGTYFAKGEIVLFIDGDFVIPAS
EEEEEECCCCCEEEEECCCCCEEEEEHHHHCCHHHHHHHHHEECCCEEEEECCCEECCHH
ELYPFAKAIADGTDVALNDLNHYLDLRVPLHLVTAFKYALNLACDRKDLGVGSLIAVPNA
HHHHHHHHHCCCCHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCH
FSRKCLKQIGYRSLLAPCVAQVKAILSGFEVACVSRVEVDKMNRIRPSEHFAKIGHPPAV
HHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHH
LRIIGDHIEGLEQLIGLTGSRGGFHDGNRKRDIL
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AKSLSVIIPAWNEIDTISDVIQSVKGLNPLEIIVVANGCTDGTETVAEHLGCKVLRYTE
CCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCHHHHHHH
KLGNDVGRAAGAKESIGDVLLFIDGDFAIQTSKLQLFLNPILYNQADVVLNNLDALFLKR
HHCHHHHHHCCCCCCCCCEEEEEECCEEEEHHHHHEEEHHHHHCCHHHHHHCCHHHHEEC
QKPNSITVWRQILNSILEREELKIDSLLAVPHALTKEVVQSIGYECFVNPILAHLRLVQG
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
KWRISRHCAIDVITPNKFRPTEHAAYGTDLSPSEKRMIGDHIEAVAERIVGSDERGGYCD
CEEEECCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
GNRKRDSVYHTLDFEDFYQGWGVTSNLYKGKQLSVIIPVQDEEKTIGNVIEELRKIEPFE
CCCCCCCEEEECCHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCEE
IIVVVNGSSDQTATIAKDKGATTIVYKEALGNDVGRSLGTYFAKGEIVLFIDGDFVIPAS
EEEEEECCCCCEEEEECCCCCEEEEEHHHHCCHHHHHHHHHEECCCEEEEECCCEECCHH
ELYPFAKAIADGTDVALNDLNHYLDLRVPLHLVTAFKYALNLACDRKDLGVGSLIAVPNA
HHHHHHHHHCCCCHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCH
FSRKCLKQIGYRSLLAPCVAQVKAILSGFEVACVSRVEVDKMNRIRPSEHFAKIGHPPAV
HHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHH
LRIIGDHIEGLEQLIGLTGSRGGFHDGNRKRDIL
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA