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The map label for this gene is yfiY [H]

Identifier: 227816515

GI number: 227816515

Start: 3609113

End: 3610078

Strand: Direct

Name: yfiY [H]

Synonym: BAMEG_3972

Alternate gene names: 227816515

Gene position: 3609113-3610078 (Clockwise)

Preceding gene: 227816511

Following gene: 227816516

Centisome position: 69.01

GC content: 33.95

Gene sequence:

>966_bases
ATGAATTTCATGCGAAAGAAATCGTTTACAGTATTTGTATTTTCATTAGCCTTTTCACTACTTTTAAGTGCTTGTGGAAA
ATCAAATACGAAAGAAGAATCAAAAGAAGATACGAAAAAAGAAATGATTCCTGTGGAACATGCAATGGGTAAAACAGAAG
TTCCTGCTAATCCAAAACGTGTAGTCATTTTAACAAATGAAGGTACTGAAGCTTTACTTGAATTAGGTGTGAAACCAGTT
GGGGCTGTAAAATCTTGGACTGGTGATCCATGGTATCCACATATTAAAGATAAAATGAAAGATGTAAAAGTTGTTGGTGA
TGAAGGACAAGTGAACGTAGAAACAATCGCTTCTTTAAAACCAGACTTAATTATCGGTAACAAAATGCGTCACGAAAAAG
TGTACGAGCAACTAAAAGCAATTGCACCTACTGTGTTCTCTGAAACATTACGCGGTGAATGGAAAGATAACTTCAAGTTT
TATGCAAAAGCATTAAATAAAGAAAAAGATGGTCAAAAGGTTTTAGCTGCTTATGATAAACGTATGAAAGATTTAAAAGC
CAAACTAGGTGATAAAGTAAATCAAGAAATCTCTATGGTTCGCTTCATGCCTGGTGATGTTCGTATTTATCATGGTGATA
CATTCTCTGGTGTTATTTTAAAAGAACTTGGATTTAAGCGTCCTGGCGATCAAAATAAAAACGACTTCGCAGAGCGTAAC
GTATCTAAAGAACGTATTTCTGCAATGGATGGTGATGTATTATTCTACTTCACATTCGATAAAGGAAACGAGAAAAAGGG
CTCTGAATTAGAAAAAGAATATATTAATGATCCTCTATTTAAAAATTTAAATGCAGTGAAAAATGGTAAAGCATACAAAG
TTGACGACGTTATTTGGAATACAGCTGGTGGTGTAATGGCTGCTAACCTACTATTAGATGATATCGAAAAACGCTTTGTT
AAATAG

Upstream 100 bases:

>100_bases
ATGAGAATTATTTTCAACCGTATGTATTGACAATCTAAAGATAAAGGCTTAATATCATGCTTGCTATTGAAAAAAATTCT
CACTATGTAGGGGGTACATA

Downstream 100 bases:

>100_bases
TATTTCCTTAACCAGCTCCCCTTCTGTGGAGCTGGTTATTTTTCAATTCACTTAAATGTCACATTATTTCGTTTTGTATT
TTTATTCCCAATATGTTATA

Product: iron compound ABC transporter, iron compound-binding protein

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MNFMRKKSFTVFVFSLAFSLLLSACGKSNTKEESKEDTKKEMIPVEHAMGKTEVPANPKRVVILTNEGTEALLELGVKPV
GAVKSWTGDPWYPHIKDKMKDVKVVGDEGQVNVETIASLKPDLIIGNKMRHEKVYEQLKAIAPTVFSETLRGEWKDNFKF
YAKALNKEKDGQKVLAAYDKRMKDLKAKLGDKVNQEISMVRFMPGDVRIYHGDTFSGVILKELGFKRPGDQNKNDFAERN
VSKERISAMDGDVLFYFTFDKGNEKKGSELEKEYINDPLFKNLNAVKNGKAYKVDDVIWNTAGGVMAANLLLDDIEKRFV
K

Sequences:

>Translated_321_residues
MNFMRKKSFTVFVFSLAFSLLLSACGKSNTKEESKEDTKKEMIPVEHAMGKTEVPANPKRVVILTNEGTEALLELGVKPV
GAVKSWTGDPWYPHIKDKMKDVKVVGDEGQVNVETIASLKPDLIIGNKMRHEKVYEQLKAIAPTVFSETLRGEWKDNFKF
YAKALNKEKDGQKVLAAYDKRMKDLKAKLGDKVNQEISMVRFMPGDVRIYHGDTFSGVILKELGFKRPGDQNKNDFAERN
VSKERISAMDGDVLFYFTFDKGNEKKGSELEKEYINDPLFKNLNAVKNGKAYKVDDVIWNTAGGVMAANLLLDDIEKRFV
K
>Mature_321_residues
MNFMRKKSFTVFVFSLAFSLLLSACGKSNTKEESKEDTKKEMIPVEHAMGKTEVPANPKRVVILTNEGTEALLELGVKPV
GAVKSWTGDPWYPHIKDKMKDVKVVGDEGQVNVETIASLKPDLIIGNKMRHEKVYEQLKAIAPTVFSETLRGEWKDNFKF
YAKALNKEKDGQKVLAAYDKRMKDLKAKLGDKVNQEISMVRFMPGDVRIYHGDTFSGVILKELGFKRPGDQNKNDFAERN
VSKERISAMDGDVLFYFTFDKGNEKKGSELEKEYINDPLFKNLNAVKNGKAYKVDDVIWNTAGGVMAANLLLDDIEKRFV
K

Specific function: Part of the ABC transporter complex yfiYZ/yfhA/yusV involved in import of the iron-hydroxamate siderophores schizokinen, arthrobactin and corprogen. Binds the siderophores and delivers them to the surface of yfiZ/yfhA (Probable) [H]

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable). Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082411, Length=266, Percent_Identity=24.4360902255639, Blast_Score=89, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 36302; Mature: 36302

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFMRKKSFTVFVFSLAFSLLLSACGKSNTKEESKEDTKKEMIPVEHAMGKTEVPANPKR
CCCCHHHCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCCCCE
VVILTNEGTEALLELGVKPVGAVKSWTGDPWYPHIKDKMKDVKVVGDEGQVNVETIASLK
EEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHEEEECCCCCEEHHHHHHCC
PDLIIGNKMRHEKVYEQLKAIAPTVFSETLRGEWKDNFKFYAKALNKEKDGQKVLAAYDK
CCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHH
RMKDLKAKLGDKVNQEISMVRFMPGDVRIYHGDTFSGVILKELGFKRPGDQNKNDFAERN
HHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCHHHHHHHCCCCCCCCCCCHHHHHHC
VSKERISAMDGDVLFYFTFDKGNEKKGSELEKEYINDPLFKNLNAVKNGKAYKVDDVIWN
CCHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCEEEHHHHHC
TAGGVMAANLLLDDIEKRFVK
CCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNFMRKKSFTVFVFSLAFSLLLSACGKSNTKEESKEDTKKEMIPVEHAMGKTEVPANPKR
CCCCHHHCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCCCCE
VVILTNEGTEALLELGVKPVGAVKSWTGDPWYPHIKDKMKDVKVVGDEGQVNVETIASLK
EEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHEEEECCCCCEEHHHHHHCC
PDLIIGNKMRHEKVYEQLKAIAPTVFSETLRGEWKDNFKFYAKALNKEKDGQKVLAAYDK
CCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHH
RMKDLKAKLGDKVNQEISMVRFMPGDVRIYHGDTFSGVILKELGFKRPGDQNKNDFAERN
HHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCHHHHHHHCCCCCCCCCCCHHHHHHC
VSKERISAMDGDVLFYFTFDKGNEKKGSELEKEYINDPLFKNLNAVKNGKAYKVDDVIWN
CCHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCEEEHHHHHC
TAGGVMAANLLLDDIEKRFVK
CCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]