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The map label for this gene is qoxD [H]

Identifier: 227816429

GI number: 227816429

Start: 3519537

End: 3519848

Strand: Direct

Name: qoxD [H]

Synonym: BAMEG_3886

Alternate gene names: 227816429

Gene position: 3519537-3519848 (Clockwise)

Preceding gene: 227816428

Following gene: 227816430

Centisome position: 67.29

GC content: 39.1

Gene sequence:

>312_bases
ATGGGTCAAAATAACAACCAAGCAAACGGGCATGCGCATAGCGGATTCCCTTGGTCACACGTTTTCGGATTTATTTTATC
GCTTGCACTAACGTTTCTAGCTCTATACGTGGCACTTTACACAAACCTGCCACTATCAACGATCCTAACTACCATTATCG
TAATGGCTGTTGCGCAAGCGTTGTTACAATTAATTATGTTCATGCATTTAAAAGAAGGAGAAGGAAGAGTTCAAATTCTT
ACTATGATTTACAGTTTCTTCGTTGCAACTGCAACAGTTGGTTTAACTGTATGGATCTTCTTCTCAATGTAA

Upstream 100 bases:

>100_bases
AGCTCGTAAAGTATTCATTATCAGCTTATACTGGCATTTCCTTGATTTAGTTTGGGTCTTTATTTACACACTAGTTTACT
TGAACGGGATGGTGGCGTAA

Downstream 100 bases:

>100_bases
TGTACATGAAAAAGACTGCTGAGGTTTCTCAGCAGTCTTTTTTTATTCCCTCCCCCTATTACACCCACATTACGGAATTA
ACAACAGAATCATGAAAAAT

Product: cytochrome aa3 quinol oxidase, subunit IV

Products: ferricytochrome c; H2O

Alternate protein names: Quinol oxidase aa3-600, subunit qoxD; Quinol oxidase polypeptide IV [H]

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MGQNNNQANGHAHSGFPWSHVFGFILSLALTFLALYVALYTNLPLSTILTTIIVMAVAQALLQLIMFMHLKEGEGRVQIL
TMIYSFFVATATVGLTVWIFFSM

Sequences:

>Translated_103_residues
MGQNNNQANGHAHSGFPWSHVFGFILSLALTFLALYVALYTNLPLSTILTTIIVMAVAQALLQLIMFMHLKEGEGRVQIL
TMIYSFFVATATVGLTVWIFFSM
>Mature_102_residues
GQNNNQANGHAHSGFPWSHVFGFILSLALTFLALYVALYTNLPLSTILTTIIVMAVAQALLQLIMFMHLKEGEGRVQILT
MIYSFFVATATVGLTVWIFFSM

Specific function: Catalyzes quinol oxidation with the concomitant reduction of oxygen to water. Major component for energy conversion during vegetative growth [H]

COG id: COG3125

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 4

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase bacterial subunit 4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.9.3.1

Molecular weight: Translated: 11427; Mature: 11296

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQNNNQANGHAHSGFPWSHVFGFILSLALTFLALYVALYTNLPLSTILTTIIVMAVAQA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LLQLIMFMHLKEGEGRVQILTMIYSFFVATATVGLTVWIFFSM
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GQNNNQANGHAHSGFPWSHVFGFILSLALTFLALYVALYTNLPLSTILTTIIVMAVAQA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LLQLIMFMHLKEGEGRVQILTMIYSFFVATATVGLTVWIFFSM
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ferrocytochrome c; O2

Specific reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7575098 [H]