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The map label for this gene is gerLC [H]

Identifier: 227816419

GI number: 227816419

Start: 3507999

End: 3509165

Strand: Reverse

Name: gerLC [H]

Synonym: BAMEG_3876

Alternate gene names: 227816419

Gene position: 3509165-3507999 (Counterclockwise)

Preceding gene: 227816420

Following gene: 227816418

Centisome position: 67.1

GC content: 34.28

Gene sequence:

>1167_bases
ATGAAACACCTTCTTAAAATTATAATGGTTATAGTTTTAGCTGGATCTATAAGTGGGTGCTCTGAACTAGAAGAAATAGA
AGAAAGAGGATTTGTAGTAGGCGCAGCTTACGATATTGTGAAGAAAAAGAAATCAAATCCGATTATGAAAGGGACGTATC
AGATGGTACTTCCCAGTAAGTTAGCACAACAAGGTGGACAGGGCGATGGAGATAGTGAAAATTATATTAATGTAAGTGCG
AAAGCAGATAGCGTCTTTGAGCAAATAAGAATAATTGCTAAAAAAATTAGTCGAACATTATTTTTTCCGCATATACAAGT
CATTATTTTTTCGGATAAATTACTAGCGAATCCGTATGTTTTGCAAAATACGTTAGATGTATATTTTCGTGATCATGAAA
TGAGACGAAATATTCGTTTGTTCGTTTCCAAGAAAAATGCAGAATCTATTTTAAAACAGAGTGCAAAACCTGAAAACTTA
CCGGCGCAGTACATTGATATGTTAGCTGAACATCCTCCGAAAAACGCTCAAATGATTGAGGCGGCGAGAATTGGTGAAGT
ACAAGGGAAAATGATCGCAGATCGAAGTTTTGCATTACCTCTCTTAGGATTAACTAAACAAGGCGTACAAATGGAAGGAG
CGGCATTGATCCGTGGAAAGGATAATAAGTGCGTTGGAACTTTGAGTGGAGAACAAACATTAGGAATGAACTATGTAATA
GGTAAAAAAATTGGAGGTTTCTTTACTGTTCGTAAAAAGAATCAGCTCATTACATATGAAATTCATAAGTTGCGCCGAAA
GATCCAAGTGTCTACTGAAAATGCTACAAAACCGAAGTTTGATATTCATTTGTCCACAGAAGGCATATTAGCTGAATTAC
ATTTTAATGAACCGAAACAAGTGATGAATGAAAAATTTTTAAAGAAAGAGATTTCAAAGGAAATGAAGAAGCGTATTGAA
AAGTCTATACAGCTTGTTCAAAAAAAATATAAGGTAGATGTATTGGAATTAGGAGAGGTATATAAGAGGCATAATTATAA
AGAGTGGAAGAAAATTAGTAAGAATTGGGATCAAGGCCAGAATTATTTTAGTAATGCTGAAATTAATGTTCACGTTGATC
CAACAATTGAACATTCAGGTTCAGCATTACCAAAGAAAGTGAAGTAA

Upstream 100 bases:

>100_bases
AGTTACGGAACGTATTTAGCGTGGATAGATATGGGGTTTGTCGTATTAGCTCCTTTGCTAGTTTTTATTGTATATAAAAT
AAAAAGAAGGAATGGTAGAA

Downstream 100 bases:

>100_bases
GGTGATGGAAGTTGTTTACTGGATTGGGAATTAGTTGCACAATATTAATAGCGATTCTTCCAGGAGCCATATACTTTATT
CATAAGAAACTCACAACGTA

Product: spore germination protein GerLC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MKHLLKIIMVIVLAGSISGCSELEEIEERGFVVGAAYDIVKKKKSNPIMKGTYQMVLPSKLAQQGGQGDGDSENYINVSA
KADSVFEQIRIIAKKISRTLFFPHIQVIIFSDKLLANPYVLQNTLDVYFRDHEMRRNIRLFVSKKNAESILKQSAKPENL
PAQYIDMLAEHPPKNAQMIEAARIGEVQGKMIADRSFALPLLGLTKQGVQMEGAALIRGKDNKCVGTLSGEQTLGMNYVI
GKKIGGFFTVRKKNQLITYEIHKLRRKIQVSTENATKPKFDIHLSTEGILAELHFNEPKQVMNEKFLKKEISKEMKKRIE
KSIQLVQKKYKVDVLELGEVYKRHNYKEWKKISKNWDQGQNYFSNAEINVHVDPTIEHSGSALPKKVK

Sequences:

>Translated_388_residues
MKHLLKIIMVIVLAGSISGCSELEEIEERGFVVGAAYDIVKKKKSNPIMKGTYQMVLPSKLAQQGGQGDGDSENYINVSA
KADSVFEQIRIIAKKISRTLFFPHIQVIIFSDKLLANPYVLQNTLDVYFRDHEMRRNIRLFVSKKNAESILKQSAKPENL
PAQYIDMLAEHPPKNAQMIEAARIGEVQGKMIADRSFALPLLGLTKQGVQMEGAALIRGKDNKCVGTLSGEQTLGMNYVI
GKKIGGFFTVRKKNQLITYEIHKLRRKIQVSTENATKPKFDIHLSTEGILAELHFNEPKQVMNEKFLKKEISKEMKKRIE
KSIQLVQKKYKVDVLELGEVYKRHNYKEWKKISKNWDQGQNYFSNAEINVHVDPTIEHSGSALPKKVK
>Mature_388_residues
MKHLLKIIMVIVLAGSISGCSELEEIEERGFVVGAAYDIVKKKKSNPIMKGTYQMVLPSKLAQQGGQGDGDSENYINVSA
KADSVFEQIRIIAKKISRTLFFPHIQVIIFSDKLLANPYVLQNTLDVYFRDHEMRRNIRLFVSKKNAESILKQSAKPENL
PAQYIDMLAEHPPKNAQMIEAARIGEVQGKMIADRSFALPLLGLTKQGVQMEGAALIRGKDNKCVGTLSGEQTLGMNYVI
GKKIGGFFTVRKKNQLITYEIHKLRRKIQVSTENATKPKFDIHLSTEGILAELHFNEPKQVMNEKFLKKEISKEMKKRIE
KSIQLVQKKYKVDVLELGEVYKRHNYKEWKKISKNWDQGQNYFSNAEINVHVDPTIEHSGSALPKKVK

Specific function: May be involved in spore germination [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKC lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008844 [H]

Pfam domain/function: PF05504 Spore_GerAC [H]

EC number: NA

Molecular weight: Translated: 44084; Mature: 44084

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHLLKIIMVIVLAGSISGCSELEEIEERGFVVGAAYDIVKKKKSNPIMKGTYQMVLPSK
CHHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEEEEHHHHHHHHCCCCCCCCHHHHHCCHH
LAQQGGQGDGDSENYINVSAKADSVFEQIRIIAKKISRTLFFPHIQVIIFSDKLLANPYV
HHHCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHCCCCH
LQNTLDVYFRDHEMRRNIRLFVSKKNAESILKQSAKPENLPAQYIDMLAEHPPKNAQMIE
HHHHHHHEECCHHHCCCEEEEEECCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHH
AARIGEVQGKMIADRSFALPLLGLTKQGVQMEGAALIRGKDNKCVGTLSGEQTLGMNYVI
HHHHHHHCCCEEECCCCCCHHHCCCCCCCEECCEEEEECCCCCEEEECCCCCCCCCEEEE
GKKIGGFFTVRKKNQLITYEIHKLRRKIQVSTENATKPKFDIHLSTEGILAELHFNEPKQ
CCCCCCEEEEECCCCEEHHHHHHHHHHEEECCCCCCCCEEEEEECCCCEEEEEECCCHHH
VMNEKFLKKEISKEMKKRIEKSIQLVQKKYKVDVLELGEVYKRHNYKEWKKISKNWDQGQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCHHHCC
NYFSNAEINVHVDPTIEHSGSALPKKVK
CCCCCCEEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKHLLKIIMVIVLAGSISGCSELEEIEERGFVVGAAYDIVKKKKSNPIMKGTYQMVLPSK
CHHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEEEEHHHHHHHHCCCCCCCCHHHHHCCHH
LAQQGGQGDGDSENYINVSAKADSVFEQIRIIAKKISRTLFFPHIQVIIFSDKLLANPYV
HHHCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHCCCCH
LQNTLDVYFRDHEMRRNIRLFVSKKNAESILKQSAKPENLPAQYIDMLAEHPPKNAQMIE
HHHHHHHEECCHHHCCCEEEEEECCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHH
AARIGEVQGKMIADRSFALPLLGLTKQGVQMEGAALIRGKDNKCVGTLSGEQTLGMNYVI
HHHHHHHCCCEEECCCCCCHHHCCCCCCCEECCEEEEECCCCCEEEECCCCCCCCCEEEE
GKKIGGFFTVRKKNQLITYEIHKLRRKIQVSTENATKPKFDIHLSTEGILAELHFNEPKQ
CCCCCCEEEEECCCCEEHHHHHHHHHHEEECCCCCCCCEEEEEECCCCEEEEEECCCHHH
VMNEKFLKKEISKEMKKRIEKSIQLVQKKYKVDVLELGEVYKRHNYKEWKKISKNWDQGQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCHHHCC
NYFSNAEINVHVDPTIEHSGSALPKKVK
CCCCCCEEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]