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The map label for this gene is ylbB [H]

Identifier: 227816408

GI number: 227816408

Start: 3490288

End: 3490707

Strand: Reverse

Name: ylbB [H]

Synonym: BAMEG_3841

Alternate gene names: 227816408

Gene position: 3490707-3490288 (Counterclockwise)

Preceding gene: 227816410

Following gene: 227816407

Centisome position: 66.74

GC content: 38.57

Gene sequence:

>420_bases
ATGACACGAGTGAGAGACGTTATGAGTACTCATATTGTACAGTGTACACCGCTAGATAATGTATATGAGGCTGCTGTAAA
GATGAAAGAAGAATCAATTGGATTGATTCCGGTTGTTGAAAATGAGCAAGTTGTTGGGCTTGTTACGGACCGAGATTTAG
TTGTTCGAGGAATTGCTGAGAAACATCCTGGATCTAATAAAATTACAAATGTAATGACAACAAACATTATTTCAGTTGCT
CCAGATGATTCTCTTGAAAAAGCTACAGAGTTAATGGCCCAGCATCAAATTAGACGATTACCAGTCGTTGAGAGTGATCA
ACTTGTTGGGATGTTAGCGCTAGGTGATTTAGCTATAAGAGAATCAGCAGATGATCAAGCTGGATTTGCTTTAAGTGAAA
TCTCGGAGCATACGGAATAA

Upstream 100 bases:

>100_bases
TGTGCGTGAATCCTCCTTTATCAACTGATTTTCTTGAAATAAATAAATAAATAAAGGGATTTAGGAAAAGCTATGGTATG
TATAAAAAGGAGGAGACAAA

Downstream 100 bases:

>100_bases
AGCAAGACTTTAATTAGTGGGATAAGTTACGTATAAAAATCAGATGCATTATACTAGTATATAGAATTAAGCTAATATGT
TAGCATGATGTATCTGAGAC

Product: CBS domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MTRVRDVMSTHIVQCTPLDNVYEAAVKMKEESIGLIPVVENEQVVGLVTDRDLVVRGIAEKHPGSNKITNVMTTNIISVA
PDDSLEKATELMAQHQIRRLPVVESDQLVGMLALGDLAIRESADDQAGFALSEISEHTE

Sequences:

>Translated_139_residues
MTRVRDVMSTHIVQCTPLDNVYEAAVKMKEESIGLIPVVENEQVVGLVTDRDLVVRGIAEKHPGSNKITNVMTTNIISVA
PDDSLEKATELMAQHQIRRLPVVESDQLVGMLALGDLAIRESADDQAGFALSEISEHTE
>Mature_138_residues
TRVRDVMSTHIVQCTPLDNVYEAAVKMKEESIGLIPVVENEQVVGLVTDRDLVVRGIAEKHPGSNKITNVMTTNIISVAP
DDSLEKATELMAQHQIRRLPVVESDQLVGMLALGDLAIRESADDQAGFALSEISEHTE

Specific function: Unknown

COG id: COG0517

COG function: function code R; FOG: CBS domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000644 [H]

Pfam domain/function: PF00571 CBS [H]

EC number: NA

Molecular weight: Translated: 15206; Mature: 15074

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRVRDVMSTHIVQCTPLDNVYEAAVKMKEESIGLIPVVENEQVVGLVTDRDLVVRGIAE
CCHHHHHHHHHEEEECCCHHHHHHHHHHHHCCCCEEEEECCCEEEEEEECCHHHHHHHHH
KHPGSNKITNVMTTNIISVAPDDSLEKATELMAQHQIRRLPVVESDQLVGMLALGDLAIR
CCCCCCCHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHCCCHHH
ESADDQAGFALSEISEHTE
CCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
TRVRDVMSTHIVQCTPLDNVYEAAVKMKEESIGLIPVVENEQVVGLVTDRDLVVRGIAE
CHHHHHHHHHEEEECCCHHHHHHHHHHHHCCCCEEEEECCCEEEEEEECCHHHHHHHHH
KHPGSNKITNVMTTNIISVAPDDSLEKATELMAQHQIRRLPVVESDQLVGMLALGDLAIR
CCCCCCCHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHCCCHHH
ESADDQAGFALSEISEHTE
CCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]