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The map label for this gene is rsbV [H]

Identifier: 227816154

GI number: 227816154

Start: 3253313

End: 3253651

Strand: Reverse

Name: rsbV [H]

Synonym: BAMEG_3581

Alternate gene names: 227816154

Gene position: 3253651-3253313 (Counterclockwise)

Preceding gene: 227816156

Following gene: 227816153

Centisome position: 62.21

GC content: 28.91

Gene sequence:

>339_bases
ATGATGAATTTGGGAATAAATATTTTGCAAAATGATGTAGGTTATACGGTACAACTTAATGGTGAAATTGATGCATATAC
AGCATCAGATTTGAAAAATAAGATCATGCCTATTGCAAGCGAAAAAGAGGTTCGTATTGTCGTAGATTTTAATAAGGTAG
ATTATATGGATAGTACTGGTTTAGGTGTTTTTATAGCGCTATTAAAAGCAGTTAAGAAAAATGATGGAAAACTAGAGTTT
ATTGGTGTATCTAAAAGGTTAAAAAGATTATTTGATATTACAGGGTTAACAGAAATATTAAATTTGAATTCCGATTTTGA
AAAAGTAGAAAGAAGGTGA

Upstream 100 bases:

>100_bases
AGATATAGAAAATTTATTTATAATAAAAATAAAAAAATATGTTTAAAACTAATTTTTATGGGTAATTAAGATAGTAATAG
TTTGAGATAAGGGGGCGGAA

Downstream 100 bases:

>100_bases
CTAGGGATGATGGAGAGATTTGAAAAGATAGAAATGAAAATTCCTGCAAAGGCAGAATATGTGGCTATTATTCGTTTAAC
AATGGCTGGTGTTGCAAATC

Product: anti sigma b factor antagonist RsbV

Products: NA

Alternate protein names: Anti-anti-sigma-B factor [H]

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MMNLGINILQNDVGYTVQLNGEIDAYTASDLKNKIMPIASEKEVRIVVDFNKVDYMDSTGLGVFIALLKAVKKNDGKLEF
IGVSKRLKRLFDITGLTEILNLNSDFEKVERR

Sequences:

>Translated_112_residues
MMNLGINILQNDVGYTVQLNGEIDAYTASDLKNKIMPIASEKEVRIVVDFNKVDYMDSTGLGVFIALLKAVKKNDGKLEF
IGVSKRLKRLFDITGLTEILNLNSDFEKVERR
>Mature_112_residues
MMNLGINILQNDVGYTVQLNGEIDAYTASDLKNKIMPIASEKEVRIVVDFNKVDYMDSTGLGVFIALLKAVKKNDGKLEF
IGVSKRLKRLFDITGLTEILNLNSDFEKVERR

Specific function: Positive regulator of sigma-B activity. Non- phosphorylated rsbV binds to rsbW, preventing its association with sigma-B. When phosphorylated, releases rsbW, which is then free to complex with and inactivate sigma-B [H]

COG id: COG1366

COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003658
- InterPro:   IPR002645 [H]

Pfam domain/function: PF01740 STAS [H]

EC number: NA

Molecular weight: Translated: 12626; Mature: 12626

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNLGINILQNDVGYTVQLNGEIDAYTASDLKNKIMPIASEKEVRIVVDFNKVDYMDSTG
CCCCCCEEEECCCCEEEEECCCCCEEEHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCC
LGVFIALLKAVKKNDGKLEFIGVSKRLKRLFDITGLTEILNLNSDFEKVERR
HHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCHHHHHCCCCCHHHHHCC
>Mature Secondary Structure
MMNLGINILQNDVGYTVQLNGEIDAYTASDLKNKIMPIASEKEVRIVVDFNKVDYMDSTG
CCCCCCEEEECCCCEEEEECCCCCEEEHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCC
LGVFIALLKAVKKNDGKLEFIGVSKRLKRLFDITGLTEILNLNSDFEKVERR
HHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCHHHHHCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11705980 [H]