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The map label for this gene is yjbK [H]

Identifier: 227815953

GI number: 227815953

Start: 3065624

End: 3066202

Strand: Direct

Name: yjbK [H]

Synonym: BAMEG_3379

Alternate gene names: 227815953

Gene position: 3065624-3066202 (Clockwise)

Preceding gene: 227815948

Following gene: 227815954

Centisome position: 58.61

GC content: 33.68

Gene sequence:

>579_bases
ATGACACAAGAAATTGAAATTGAATTTAAAAATATTGTTACAGAAGAAGAATTCCATGCATTATGTAAATCATTTTCTAT
TGAGGTATTTACGAAACAAGTGAATCACTATTTTGAAACACCGAACTTCTCATTAAAGGAAGCTGGCTCTGCACTTCGTA
TTCGTCATAAAGGAGAAACTTATACATTAACATTGAAACAACCTGCAGAAGTCGGCTTGTCGGAAACACATCAAGTTGTA
ACAGAAAACGAAGCAAAAATGATGATGGAGACAAACGTAATTATTTCAGGGGCTGTAATGAATCAACTATGCAAACTACA
AATTCCTGTTTCTGCTCTAACTTATATGGGTAGTTTAACAACTGAAAGAGCTGAAACGTTATTTGAAGGCGGAACGCTTG
TCTTTGATCATAGTTTCTATTACAATCACGATGATTATGAAATTGAATTTGAAGTGCAAGATGAAGAAACAGGAAAAGCT
GCCTTTATTCATTTATTAAAGCAGCATAACATACCTATCCGTCATACAAATAACAAAGTAAAACGCTTTTTCCTTGCCAA
ACAAAACAAAGCACGCTAA

Upstream 100 bases:

>100_bases
TTGTATCATAACATGGACGCAAACAAATAAAACATTGAACCAAATTTGTGAAAAAGCGATAATGTGTAAAGAATTATTTT
TCAAAAGGAGCGCGCATACA

Downstream 100 bases:

>100_bases
AGTGAAAATTCCACTAGTGAATACGTTCTACTAGTGGATACATCTCACTTTTTGAAAAGGAAAAGATTCTTTTACAACTG
TAGAATAAGCAAAGAACGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MTQEIEIEFKNIVTEEEFHALCKSFSIEVFTKQVNHYFETPNFSLKEAGSALRIRHKGETYTLTLKQPAEVGLSETHQVV
TENEAKMMMETNVIISGAVMNQLCKLQIPVSALTYMGSLTTERAETLFEGGTLVFDHSFYYNHDDYEIEFEVQDEETGKA
AFIHLLKQHNIPIRHTNNKVKRFFLAKQNKAR

Sequences:

>Translated_192_residues
MTQEIEIEFKNIVTEEEFHALCKSFSIEVFTKQVNHYFETPNFSLKEAGSALRIRHKGETYTLTLKQPAEVGLSETHQVV
TENEAKMMMETNVIISGAVMNQLCKLQIPVSALTYMGSLTTERAETLFEGGTLVFDHSFYYNHDDYEIEFEVQDEETGKA
AFIHLLKQHNIPIRHTNNKVKRFFLAKQNKAR
>Mature_191_residues
TQEIEIEFKNIVTEEEFHALCKSFSIEVFTKQVNHYFETPNFSLKEAGSALRIRHKGETYTLTLKQPAEVGLSETHQVVT
ENEAKMMMETNVIISGAVMNQLCKLQIPVSALTYMGSLTTERAETLFEGGTLVFDHSFYYNHDDYEIEFEVQDEETGKAA
FIHLLKQHNIPIRHTNNKVKRFFLAKQNKAR

Specific function: Unknown

COG id: COG4116

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008172
- InterPro:   IPR004206
- InterPro:   IPR009195 [H]

Pfam domain/function: PF01928 CYTH [H]

EC number: NA

Molecular weight: Translated: 22153; Mature: 22022

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: PS00284 SERPIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQEIEIEFKNIVTEEEFHALCKSFSIEVFTKQVNHYFETPNFSLKEAGSALRIRHKGET
CCCEEEEEHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHCCCEEEEEECCCE
YTLTLKQPAEVGLSETHQVVTENEAKMMMETNVIISGAVMNQLCKLQIPVSALTYMGSLT
EEEEECCCCCCCCCHHHHHHCCCCHHEEEECCEEEEHHHHHHHHEEECCHHHHHHHHCCH
TERAETLFEGGTLVFDHSFYYNHDDYEIEFEVQDEETGKAAFIHLLKQHNIPIRHTNNKV
HHHHHHHHCCCEEEEECCEEECCCCEEEEEEECCCCCCHHHHHHHHHHCCCCEEECCCHH
KRFFLAKQNKAR
HEEEEECCCCCC
>Mature Secondary Structure 
TQEIEIEFKNIVTEEEFHALCKSFSIEVFTKQVNHYFETPNFSLKEAGSALRIRHKGET
CCEEEEEHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHCCCEEEEEECCCE
YTLTLKQPAEVGLSETHQVVTENEAKMMMETNVIISGAVMNQLCKLQIPVSALTYMGSLT
EEEEECCCCCCCCCHHHHHHCCCCHHEEEECCEEEEHHHHHHHHEEECCHHHHHHHHCCH
TERAETLFEGGTLVFDHSFYYNHDDYEIEFEVQDEETGKAAFIHLLKQHNIPIRHTNNKV
HHHHHHHHCCCEEEEECCEEECCCCEEEEEEECCCCCCHHHHHHHHHHCCCCEEECCCHH
KRFFLAKQNKAR
HEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]