Click here to switch to the map view.

The map label for this gene is yjcF [H]

Identifier: 227815924

GI number: 227815924

Start: 3042084

End: 3042506

Strand: Direct

Name: yjcF [H]

Synonym: BAMEG_3350

Alternate gene names: 227815924

Gene position: 3042084-3042506 (Clockwise)

Preceding gene: 227815923

Following gene: 227815925

Centisome position: 58.16

GC content: 37.59

Gene sequence:

>423_bases
TTGCATGCACAGATCGTACAAACGGACGAACAACTAAGAGATGCATTCTCTGTACGTAAGCAAGTATTTGTGAAGGAACA
GCAAGTTTCTGCTGAAGAAGAGTATGATGAGTTTGAAGAAACTTCCATACACGTTGTTATATATGATAATGATGTTCCCG
TTGGTGCTGGGCGTTTTCGCACCATTGATGGAATTGGAAAAATGGAACGCATTTGCGTACTAGCTTCCCATCGTAAAAAA
GGCATTGGAAAAATTGTTATGGATGCACTTGAAGCATATGCGAAGGAAAACTCGCTATCAAAATTAAAGCTGCATGCCCA
AACACATGCTGAAGATTTCTATAAGAAACTTGGATATGTAACGAATTCTGATGTATTTATGGAAGCAAATATTCCTCACA
TCGTTATGATAAAAGAATTGTAA

Upstream 100 bases:

>100_bases
TACGAACAACCAATTGACCGTTTCCACCTACTATATCAATTAGAAAATGGAACATGGACTGTACACGAAACATTCCGCCT
TGGAAAGGGGAACAACTAAT

Downstream 100 bases:

>100_bases
TTTGAAAACAGGAGGTATCCCCTCCTGTTTTTTACATTGCTATTTTCTTTTTCTTCCGCTAAAGTTAAATGTTGATGCTA
TAGTTTTGAAGGTGAATGTA

Product: acetyltransferase, GNAT family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MHAQIVQTDEQLRDAFSVRKQVFVKEQQVSAEEEYDEFEETSIHVVIYDNDVPVGAGRFRTIDGIGKMERICVLASHRKK
GIGKIVMDALEAYAKENSLSKLKLHAQTHAEDFYKKLGYVTNSDVFMEANIPHIVMIKEL

Sequences:

>Translated_140_residues
MHAQIVQTDEQLRDAFSVRKQVFVKEQQVSAEEEYDEFEETSIHVVIYDNDVPVGAGRFRTIDGIGKMERICVLASHRKK
GIGKIVMDALEAYAKENSLSKLKLHAQTHAEDFYKKLGYVTNSDVFMEANIPHIVMIKEL
>Mature_140_residues
MHAQIVQTDEQLRDAFSVRKQVFVKEQQVSAEEEYDEFEETSIHVVIYDNDVPVGAGRFRTIDGIGKMERICVLASHRKK
GIGKIVMDALEAYAKENSLSKLKLHAQTHAEDFYKKLGYVTNSDVFMEANIPHIVMIKEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI17557716, Length=138, Percent_Identity=33.3333333333333, Blast_Score=68, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181 [H]

Pfam domain/function: PF00583 Acetyltransf_1 [H]

EC number: NA

Molecular weight: Translated: 15999; Mature: 15999

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHAQIVQTDEQLRDAFSVRKQVFVKEQQVSAEEEYDEFEETSIHVVIYDNDVPVGAGRFR
CCCCEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCEEEEEEECCCCCCCCCCEE
TIDGIGKMERICVLASHRKKGIGKIVMDALEAYAKENSLSKLKLHAQTHAEDFYKKLGYV
EECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHEEEHHHHHHHHHHHHHCCC
TNSDVFMEANIPHIVMIKEL
CCCCEEEECCCCEEEEEECC
>Mature Secondary Structure
MHAQIVQTDEQLRDAFSVRKQVFVKEQQVSAEEEYDEFEETSIHVVIYDNDVPVGAGRFR
CCCCEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCEEEEEEECCCCCCCCCCEE
TIDGIGKMERICVLASHRKKGIGKIVMDALEAYAKENSLSKLKLHAQTHAEDFYKKLGYV
EECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHEEEHHHHHHHHHHHHHCCC
TNSDVFMEANIPHIVMIKEL
CCCCEEEECCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]