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The map label for this gene is fliD [H]

Identifier: 227815502

GI number: 227815502

Start: 2657993

End: 2659345

Strand: Reverse

Name: fliD [H]

Synonym: BAMEG_2915

Alternate gene names: 227815502

Gene position: 2659345-2657993 (Counterclockwise)

Preceding gene: 227815503

Following gene: 227815501

Centisome position: 50.85

GC content: 31.93

Gene sequence:

>1353_bases
ATGGCAGGGGCTTTAACGGGTATTGATGGTAGACAACAAATCTGGAATCTTGGTAATAATATGATTGATACCTCAAAACT
TGTAGAATTAGAATTGCAAACTTTAGAAATGAAGAAGTCACCGTATAATAATCAAAAACAGTTACTAACAACTGAACGAA
ATATATATGCAAGTATGAAAAAAGAATTCGGTAGCTTTTTGCAAATATTTAAAGATTTATATACGTTTAAAGGTAATGAA
AAGAAAACAGCATTATCAAAAGAAGGTTTTGTTACGGCACAGGCAGATGCATCTGCGATTGCAGGAACATATACCGTTAC
AATTGAAAAAATTGCAGAGCGCCACCAAATTACAACAAAGCCAGGTAATAAAATAGACTTAGATGCAAAGATTGGAAAAG
ACGTTACGTTTGGAATTAATGATAAAGAAGTTGAAGTTCCAAAGGATATGACCTATAAAGACTTAGTCAATAAAATCAAT
AATGGAAATTATGGCGTGTCTGTATATTCATTGGGTGGGCAATTGTTCTTTACATCTACTACAGCTGGGGAAAAAGGAGC
GATAAATTTAGTAGATGGCAAAGACGGCTTTTTAGAAGAAATAGGTTTAGTGCAATCATCTATTGGTACTGGCGGTGAAA
AATTATTTGTGGCCGCGCATGAAATAACAGCAGCTACAAATGCTGAATATACGATAAATGGGATTAAAGATTCGAGTACA
TCTAATAAAATTGATACAATTCCAGGTTTAGTAATTAATTTGGAAAAAGAAACTACAGAACCTATCAAAATTACTATTGA
AGATTCTAATATAAAAGACTCAATTGATTTAATCAAAAAAATGAAGGATGAATATAATAAAGCTGTTTCAAACTTAGATT
TATTTGCTGGGGAAAATGGAGCTGTACAAGGAAGTAGTATTGCATTTTCGATTAGTAACGCGATGACAAGTATATTTAGA
TATTCGCAAAATGGTAAGTTTTTGAACGATTTTGGGATTCAAGTGGACAAAAGTGGGAAAATGAATTTGGATGAAGAGAA
GTTGAAAAATGCTTTTAAAGAGAATCCAGAAACAGCGAAACAATTTTTCTTTGGTTTTTCTGGATTGGGTCATCAAATGG
AGAAACAGTTAGATGGAATTTTTGGAGATGAAGGAATCATAGGAAAACGTTCTAAAAGCATTGAAAAGCAAATGAAAAAT
CTAGATGATAAAATAAGATATATTGACGGCGTAAATAAAGAGAAACAACAAGCTATTATTGATAAGTATTCTAAGTTGGA
AAGCACATTAGCAGAATTGGACAGCCAACTAAAAACAATTAAAGCAATGACAAAACAAAAAAGTGATGATTAA

Upstream 100 bases:

>100_bases
GCTTATATAAACGCAACGTATGAAGCAACTTTAAAAGCTGTTAGTACGATGAGTAAAACAAGCATTTTAGATTATATGTA
ATCAATAAGGAGTGGGAAAT

Downstream 100 bases:

>100_bases
TGAAAGGTAAGGAAGTGATTGTATGCAAGCATGGCAACGTTATATGCAAAATGATATTATGACGAGTAATCCGATTAAAA
ATACAATTTTTATTTATGAA

Product: flagellar capping protein

Products: NA

Alternate protein names: HAP2; Filament CAP protein [H]

Number of amino acids: Translated: 450; Mature: 449

Protein sequence:

>450_residues
MAGALTGIDGRQQIWNLGNNMIDTSKLVELELQTLEMKKSPYNNQKQLLTTERNIYASMKKEFGSFLQIFKDLYTFKGNE
KKTALSKEGFVTAQADASAIAGTYTVTIEKIAERHQITTKPGNKIDLDAKIGKDVTFGINDKEVEVPKDMTYKDLVNKIN
NGNYGVSVYSLGGQLFFTSTTAGEKGAINLVDGKDGFLEEIGLVQSSIGTGGEKLFVAAHEITAATNAEYTINGIKDSST
SNKIDTIPGLVINLEKETTEPIKITIEDSNIKDSIDLIKKMKDEYNKAVSNLDLFAGENGAVQGSSIAFSISNAMTSIFR
YSQNGKFLNDFGIQVDKSGKMNLDEEKLKNAFKENPETAKQFFFGFSGLGHQMEKQLDGIFGDEGIIGKRSKSIEKQMKN
LDDKIRYIDGVNKEKQQAIIDKYSKLESTLAELDSQLKTIKAMTKQKSDD

Sequences:

>Translated_450_residues
MAGALTGIDGRQQIWNLGNNMIDTSKLVELELQTLEMKKSPYNNQKQLLTTERNIYASMKKEFGSFLQIFKDLYTFKGNE
KKTALSKEGFVTAQADASAIAGTYTVTIEKIAERHQITTKPGNKIDLDAKIGKDVTFGINDKEVEVPKDMTYKDLVNKIN
NGNYGVSVYSLGGQLFFTSTTAGEKGAINLVDGKDGFLEEIGLVQSSIGTGGEKLFVAAHEITAATNAEYTINGIKDSST
SNKIDTIPGLVINLEKETTEPIKITIEDSNIKDSIDLIKKMKDEYNKAVSNLDLFAGENGAVQGSSIAFSISNAMTSIFR
YSQNGKFLNDFGIQVDKSGKMNLDEEKLKNAFKENPETAKQFFFGFSGLGHQMEKQLDGIFGDEGIIGKRSKSIEKQMKN
LDDKIRYIDGVNKEKQQAIIDKYSKLESTLAELDSQLKTIKAMTKQKSDD
>Mature_449_residues
AGALTGIDGRQQIWNLGNNMIDTSKLVELELQTLEMKKSPYNNQKQLLTTERNIYASMKKEFGSFLQIFKDLYTFKGNEK
KTALSKEGFVTAQADASAIAGTYTVTIEKIAERHQITTKPGNKIDLDAKIGKDVTFGINDKEVEVPKDMTYKDLVNKINN
GNYGVSVYSLGGQLFFTSTTAGEKGAINLVDGKDGFLEEIGLVQSSIGTGGEKLFVAAHEITAATNAEYTINGIKDSSTS
NKIDTIPGLVINLEKETTEPIKITIEDSNIKDSIDLIKKMKDEYNKAVSNLDLFAGENGAVQGSSIAFSISNAMTSIFRY
SQNGKFLNDFGIQVDKSGKMNLDEEKLKNAFKENPETAKQFFFGFSGLGHQMEKQLDGIFGDEGIIGKRSKSIEKQMKNL
DDKIRYIDGVNKEKQQAIIDKYSKLESTLAELDSQLKTIKAMTKQKSDD

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 49686; Mature: 49555

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGALTGIDGRQQIWNLGNNMIDTSKLVELELQTLEMKKSPYNNQKQLLTTERNIYASMK
CCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
KEFGSFLQIFKDLYTFKGNEKKTALSKEGFVTAQADASAIAGTYTVTIEKIAERHQITTK
HHHHHHHHHHHHHHHCCCCCHHHHHCCCCCEEEECCCCHHCCEEEEEHHHHHHHHCEECC
PGNKIDLDAKIGKDVTFGINDKEVEVPKDMTYKDLVNKINNGNYGVSVYSLGGQLFFTST
CCCEEEECCCCCCCEEECCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEEECCEEEEEEC
TAGEKGAINLVDGKDGFLEEIGLVQSSIGTGGEKLFVAAHEITAATNAEYTINGIKDSST
CCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEEEHHEEECCCCEEEECCCCCCC
SNKIDTIPGLVINLEKETTEPIKITIEDSNIKDSIDLIKKMKDEYNKAVSNLDLFAGENG
CCCCCCCCCEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCC
AVQGSSIAFSISNAMTSIFRYSQNGKFLNDFGIQVDKSGKMNLDEEKLKNAFKENPETAK
CCCCCEEEEEHHHHHHHHHHHCCCCCEEECCCEEEECCCCCCCCHHHHHHHHHCCHHHHH
QFFFGFSGLGHQMEKQLDGIFGDEGIIGKRSKSIEKQMKNLDDKIRYIDGVNKEKQQAII
HHHHHHHHCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHH
DKYSKLESTLAELDSQLKTIKAMTKQKSDD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AGALTGIDGRQQIWNLGNNMIDTSKLVELELQTLEMKKSPYNNQKQLLTTERNIYASMK
CCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
KEFGSFLQIFKDLYTFKGNEKKTALSKEGFVTAQADASAIAGTYTVTIEKIAERHQITTK
HHHHHHHHHHHHHHHCCCCCHHHHHCCCCCEEEECCCCHHCCEEEEEHHHHHHHHCEECC
PGNKIDLDAKIGKDVTFGINDKEVEVPKDMTYKDLVNKINNGNYGVSVYSLGGQLFFTST
CCCEEEECCCCCCCEEECCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEEECCEEEEEEC
TAGEKGAINLVDGKDGFLEEIGLVQSSIGTGGEKLFVAAHEITAATNAEYTINGIKDSST
CCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEEEHHEEECCCCEEEECCCCCCC
SNKIDTIPGLVINLEKETTEPIKITIEDSNIKDSIDLIKKMKDEYNKAVSNLDLFAGENG
CCCCCCCCCEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCC
AVQGSSIAFSISNAMTSIFRYSQNGKFLNDFGIQVDKSGKMNLDEEKLKNAFKENPETAK
CCCCCEEEEEHHHHHHHHHHHCCCCCEEECCCEEEECCCCCCCCHHHHHHHHHCCHHHHH
QFFFGFSGLGHQMEKQLDGIFGDEGIIGKRSKSIEKQMKNLDDKIRYIDGVNKEKQQAII
HHHHHHHHCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHH
DKYSKLESTLAELDSQLKTIKAMTKQKSDD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8501040; 12620739 [H]