Click here to switch to the map view.

The map label for this gene is sspH2

Identifier: 227815445

GI number: 227815445

Start: 2615497

End: 2615676

Strand: Direct

Name: sspH2

Synonym: BAMEG_2858

Alternate gene names: 227815445

Gene position: 2615497-2615676 (Clockwise)

Preceding gene: 227815444

Following gene: 227815446

Centisome position: 50.01

GC content: 40.56

Gene sequence:

>180_bases
ATGAATATTCAACGTGCAAAAGAGCTTTCTGTGTCAGCGGAGCAAGCGAATGTTAGTTTTCAAGGCATGCCTGTTATGAT
TCAACACGTCGACGAAAGCAATGAAACCGCCCGCATATATGAAGTAAAAAACCCAGGACGCGAATTAACAGTTCCAGTTA
ATAGCTTAGAGGAAATATAA

Upstream 100 bases:

>100_bases
TAAAGAAACATTACAAATAATACAAAAACTTTAAGAACGTCTCGAAATGGTATATTATTCCTCTTTTTTAGCAAAGATAA
TAATGATGGGAGGAATATAA

Downstream 100 bases:

>100_bases
GAAATGCCACTTCATTTTTTTGAAGTGGCATTTTTCTTTTTTTAGATTACTTATTATAAATTTCTTCTATCTTCTATTTT
ACAGGAGCTGAAAAAAAATA

Product: small acid-soluble spore protein, H-type

Products: NA

Alternate protein names: SASP H 2

Number of amino acids: Translated: 59; Mature: 59

Protein sequence:

>59_residues
MNIQRAKELSVSAEQANVSFQGMPVMIQHVDESNETARIYEVKNPGRELTVPVNSLEEI

Sequences:

>Translated_59_residues
MNIQRAKELSVSAEQANVSFQGMPVMIQHVDESNETARIYEVKNPGRELTVPVNSLEEI
>Mature_59_residues
MNIQRAKELSVSAEQANVSFQGMPVMIQHVDESNETARIYEVKNPGRELTVPVNSLEEI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Spore core

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sspH family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SSPH2_BACAN (Q81SD1)

Other databases:

- EMBL:   AE016879
- EMBL:   AE017334
- EMBL:   AE017225
- RefSeq:   NP_844164.1
- RefSeq:   YP_018369.1
- EnsemblBacteria:   EBBACT00000012949
- EnsemblBacteria:   EBBACT00000015153
- EnsemblBacteria:   EBBACT00000083052
- GeneID:   1086835
- GeneID:   2817966
- GenomeReviews:   AE016879_GR
- GenomeReviews:   AE017225_GR
- GenomeReviews:   AE017334_GR
- KEGG:   ban:BA_1729
- KEGG:   bar:GBAA_1729
- TIGR:   BA_1729
- TIGR:   GBAA_1729
- GeneTree:   EBGT00050000002889
- HOGENOM:   HBG304500
- OMA:   PIYIQHV
- ProtClustDB:   CLSK916333
- BioCyc:   BANT261594:GBAA1729-MONOMER
- HAMAP:   MF_00667
- InterPro:   IPR012610
- ProDom:   PD052450
- TIGRFAMs:   TIGR02861

Pfam domain/function: PF08141 SspH

EC number: NA

Molecular weight: Translated: 6629; Mature: 6629

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIQRAKELSVSAEQANVSFQGMPVMIQHVDESNETARIYEVKNPGRELTVPVNSLEEI
CCCCCCCCCCCCCCCCCEEECCCEEEEEECCCCCCEEEEEEECCCCCEEEEECCCCCCC
>Mature Secondary Structure
MNIQRAKELSVSAEQANVSFQGMPVMIQHVDESNETARIYEVKNPGRELTVPVNSLEEI
CCCCCCCCCCCCCCCCCEEECCCEEEEEECCCCCCEEEEEEECCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12721629