Click here to switch to the map view.

The map label for this gene is pqqE [H]

Identifier: 227815307

GI number: 227815307

Start: 2480430

End: 2481563

Strand: Reverse

Name: pqqE [H]

Synonym: BAMEG_2719

Alternate gene names: 227815307

Gene position: 2481563-2480430 (Counterclockwise)

Preceding gene: 227815308

Following gene: 227815305

Centisome position: 47.45

GC content: 36.6

Gene sequence:

>1134_bases
ATGAATCTTGATTTTAATAATAATCCATTTATTGTAATATGGGAGTTAACAAGAGCATGTCAATTAAAATGTTTGCATTG
TCGTGCAGAAGCACAGTATCATCGTCATCCTCTAGAGCTAACATTTGAAGAAGGAAAGAAACTAATTGATGATATATATG
AAATGGAAAATCCAATGCTTGTATTTACTGGTGGAGATCCATTAATGCGTCCAGATGTATATGATATTGCGGAATATGCA
GTGAAAAAAGGTGTTCGAGTATCTATGACACCAAGCGCCACCCCGAACGTTACGAAAGAAACGATTCAAAAAGCAAAAGA
AGTAGGACTTGCTAGATGGGCATTTAGTTTAGATGGACCAACAGCTGAAATACACGATCATTTTAGAGGGACAGAAGGGT
CATTTCAATTAACGATGAATGCAATTCGTTATTTGCATGAATTAAAAATTCCTATTCAAATTAATACTGTTGTTTCTAAT
TATAATGTGGATGCACTTGAAGAGATGGCAGTGTTAATAGAAGAATTAGAATGTGTACTCTGGAGTATATTTTTCTTAGT
TCCAATAGGGCGAGGGAAGGAAAAAGATATGATTTCACCAGCTCAACATGAAAGGGTATTCCGTTGGCTATATCAACTTA
GTAAAAAGGTTTCTTTTGATATTAAAACAACAGCTGGTCAGCACTATAGACGTGTTGTGATCCAAGAAAAAATGAAAGAA
CATAAAAAGGAAAAACAGGTCATTCAATATCAGGATGTATTGATGAATGGGATGACGGGGCGAGTTAATGGGCTTGGGCG
TGCTCCAAAAGGGGTGAATGATGGAAACGGTTTTGTATTTATTTCTCATATTGGAGATGTATATCCAAGTGGGTTATTGC
CGATTAGAACCGGGAATATTAGAACAAATTCGCTAGCTGAAATCTATCGAAACTCCCCTGTTTTTCAAAATCTTCGTAAT
CCTGACAAGTATAAGGGAAAGTGTGGTGTTTGTGAGTTTCGATATGTTTGTGGGGGATCTCGTTCTAGAGCATATGCAAT
GACGGGGGATTATATGGAAAGTGAGCCTTTCTGCGTATACGTACCAAAAGCATTGCGAAAACAGAAAAAGAACATAAAAA
AGGGACATGAGTAA

Upstream 100 bases:

>100_bases
ACAGTAGGGTAGGAAGAGAATGATTTGTGATACATCTCACACCATAAATACATATATAACTTTACAATTAGAATATCAAT
TGATGGGAGGGTTAATATTG

Downstream 100 bases:

>100_bases
AAGCTTACTCATAGCCCTTCTTTAATGTTTTATAATGGAGAGTACTTCGCATCCTTCATTAAAAATTCACTACCTATATC
TGCTGTACTGAAACAAGTTT

Product: putative coenzyme PQQ synthesis protein

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein E [H]

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MNLDFNNNPFIVIWELTRACQLKCLHCRAEAQYHRHPLELTFEEGKKLIDDIYEMENPMLVFTGGDPLMRPDVYDIAEYA
VKKGVRVSMTPSATPNVTKETIQKAKEVGLARWAFSLDGPTAEIHDHFRGTEGSFQLTMNAIRYLHELKIPIQINTVVSN
YNVDALEEMAVLIEELECVLWSIFFLVPIGRGKEKDMISPAQHERVFRWLYQLSKKVSFDIKTTAGQHYRRVVIQEKMKE
HKKEKQVIQYQDVLMNGMTGRVNGLGRAPKGVNDGNGFVFISHIGDVYPSGLLPIRTGNIRTNSLAEIYRNSPVFQNLRN
PDKYKGKCGVCEFRYVCGGSRSRAYAMTGDYMESEPFCVYVPKALRKQKKNIKKGHE

Sequences:

>Translated_377_residues
MNLDFNNNPFIVIWELTRACQLKCLHCRAEAQYHRHPLELTFEEGKKLIDDIYEMENPMLVFTGGDPLMRPDVYDIAEYA
VKKGVRVSMTPSATPNVTKETIQKAKEVGLARWAFSLDGPTAEIHDHFRGTEGSFQLTMNAIRYLHELKIPIQINTVVSN
YNVDALEEMAVLIEELECVLWSIFFLVPIGRGKEKDMISPAQHERVFRWLYQLSKKVSFDIKTTAGQHYRRVVIQEKMKE
HKKEKQVIQYQDVLMNGMTGRVNGLGRAPKGVNDGNGFVFISHIGDVYPSGLLPIRTGNIRTNSLAEIYRNSPVFQNLRN
PDKYKGKCGVCEFRYVCGGSRSRAYAMTGDYMESEPFCVYVPKALRKQKKNIKKGHE
>Mature_377_residues
MNLDFNNNPFIVIWELTRACQLKCLHCRAEAQYHRHPLELTFEEGKKLIDDIYEMENPMLVFTGGDPLMRPDVYDIAEYA
VKKGVRVSMTPSATPNVTKETIQKAKEVGLARWAFSLDGPTAEIHDHFRGTEGSFQLTMNAIRYLHELKIPIQINTVVSN
YNVDALEEMAVLIEELECVLWSIFFLVPIGRGKEKDMISPAQHERVFRWLYQLSKKVSFDIKTTAGQHYRRVVIQEKMKE
HKKEKQVIQYQDVLMNGMTGRVNGLGRAPKGVNDGNGFVFISHIGDVYPSGLLPIRTGNIRTNSLAEIYRNSPVFQNLRN
PDKYKGKCGVCEFRYVCGGSRSRAYAMTGDYMESEPFCVYVPKALRKQKKNIKKGHE

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. PqqE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR000385
- InterPro:   IPR017200
- InterPro:   IPR011843
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 43191; Mature: 43191

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLDFNNNPFIVIWELTRACQLKCLHCRAEAQYHRHPLELTFEEGKKLIDDIYEMENPML
CCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCCEE
VFTGGDPLMRPDVYDIAEYAVKKGVRVSMTPSATPNVTKETIQKAKEVGLARWAFSLDGP
EEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHCCHHHEEEECCCC
TAEIHDHFRGTEGSFQLTMNAIRYLHELKIPIQINTVVSNYNVDALEEMAVLIEELECVL
CHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHH
WSIFFLVPIGRGKEKDMISPAQHERVFRWLYQLSKKVSFDIKTTAGQHYRRVVIQEKMKE
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHH
HKKEKQVIQYQDVLMNGMTGRVNGLGRAPKGVNDGNGFVFISHIGDVYPSGLLPIRTGNI
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCC
RTNSLAEIYRNSPVFQNLRNPDKYKGKCGVCEFRYVCGGSRSRAYAMTGDYMESEPFCVY
CCHHHHHHHCCCHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCEEEE
VPKALRKQKKNIKKGHE
CCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNLDFNNNPFIVIWELTRACQLKCLHCRAEAQYHRHPLELTFEEGKKLIDDIYEMENPML
CCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCCEE
VFTGGDPLMRPDVYDIAEYAVKKGVRVSMTPSATPNVTKETIQKAKEVGLARWAFSLDGP
EEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHCCHHHEEEECCCC
TAEIHDHFRGTEGSFQLTMNAIRYLHELKIPIQINTVVSNYNVDALEEMAVLIEELECVL
CHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHH
WSIFFLVPIGRGKEKDMISPAQHERVFRWLYQLSKKVSFDIKTTAGQHYRRVVIQEKMKE
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHH
HKKEKQVIQYQDVLMNGMTGRVNGLGRAPKGVNDGNGFVFISHIGDVYPSGLLPIRTGNI
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCC
RTNSLAEIYRNSPVFQNLRNPDKYKGKCGVCEFRYVCGGSRSRAYAMTGDYMESEPFCVY
CCHHHHHHHCCCHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCEEEE
VPKALRKQKKNIKKGHE
CCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12597275 [H]