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The map label for this gene is yidA [C]

Identifier: 227814762

GI number: 227814762

Start: 1978075

End: 1978848

Strand: Reverse

Name: yidA [C]

Synonym: BAMEG_2172

Alternate gene names: 227814762

Gene position: 1978848-1978075 (Counterclockwise)

Preceding gene: 227814764

Following gene: 227814761

Centisome position: 37.84

GC content: 31.01

Gene sequence:

>774_bases
ATGAAAAAGATTATTATTTCAGACCTTGATGGGACTTTATTAAGAAGTGATAAAACAATTTCAGAGAAATCTATTAATAT
TCTAAGGGAATGTAAAAATAATGGAGACGAATTGATTTTTGCTACAGCAAGGCCGCCAAGAGCTATAAAACAATATATTC
CCAACGTGTTAAAGAGCGAGATTATTATTTGTTATAACGGAGCTCTAGTTCTTAAAGGTAATAATATTTTATACGAAATG
AAGATTTCTAAAAATGACATTTTAGAAATCATAGAAATAGCAAACAAGTATAATCTTCATGAGATTTGTCTTGAAATAGG
TGATAAGTTGTATTCAAATTTTGATGTTACTGATTATTTTGGTAATATACCATGTGAAATTATAGATGTAAGAGATTTAG
ACTTTGAAAAAGCTTCTAAAGCAATTATTTGTACTAATGGCCCAATAAAACAGAAATTTATTAAAGAATTGCCTGATGAA
TGCAGGGGAGTCATTACAGATGATGGCACATTGTGTCAAATTATGCATGCAGAAGTTTCAAAATGGAATAGTATTCAATA
TGTTCTACAGCACTTAAATCGAGACGTATCTGAAGTTATTGCCTTTGGAGATGACTACAATGATATGGAAATGATAGAGA
AGTGTGGGATTGGTGTAGCAATGAGCAACGCTGTTGAGGAATTAAAGGCAGTCGCTAAATTTATTGCTAAAAGTAACGAT
GAGGATGGAGTTGCTACATTTCTAGAAAGTAAAAGTTATGTTTATGTTGACTAG

Upstream 100 bases:

>100_bases
CAAAAAGAAAGTTGAGATTAACTATCCGCAGCAGCGCTGGTGATCCAAAAAATAACCAATATTTCGAATTATTATTTGTG
AAAGGAGAATAAAGATAAGT

Downstream 100 bases:

>100_bases
TATGAAAAAAATTGTAGTAAGCAGCGAAAAAAGAGATGCTGCATCTGTTTTGATAAATAGATATTATGAATGAGATATGC
GGGAGGAAACAAGCAAAATG

Product: hydrolase, haloacid dehalogenase-like family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MKKIIISDLDGTLLRSDKTISEKSINILRECKNNGDELIFATARPPRAIKQYIPNVLKSEIIICYNGALVLKGNNILYEM
KISKNDILEIIEIANKYNLHEICLEIGDKLYSNFDVTDYFGNIPCEIIDVRDLDFEKASKAIICTNGPIKQKFIKELPDE
CRGVITDDGTLCQIMHAEVSKWNSIQYVLQHLNRDVSEVIAFGDDYNDMEMIEKCGIGVAMSNAVEELKAVAKFIAKSND
EDGVATFLESKSYVYVD

Sequences:

>Translated_257_residues
MKKIIISDLDGTLLRSDKTISEKSINILRECKNNGDELIFATARPPRAIKQYIPNVLKSEIIICYNGALVLKGNNILYEM
KISKNDILEIIEIANKYNLHEICLEIGDKLYSNFDVTDYFGNIPCEIIDVRDLDFEKASKAIICTNGPIKQKFIKELPDE
CRGVITDDGTLCQIMHAEVSKWNSIQYVLQHLNRDVSEVIAFGDDYNDMEMIEKCGIGVAMSNAVEELKAVAKFIAKSND
EDGVATFLESKSYVYVD
>Mature_257_residues
MKKIIISDLDGTLLRSDKTISEKSINILRECKNNGDELIFATARPPRAIKQYIPNVLKSEIIICYNGALVLKGNNILYEM
KISKNDILEIIEIANKYNLHEICLEIGDKLYSNFDVTDYFGNIPCEIIDVRDLDFEKASKAIICTNGPIKQKFIKELPDE
CRGVITDDGTLCQIMHAEVSKWNSIQYVLQHLNRDVSEVIAFGDDYNDMEMIEKCGIGVAMSNAVEELKAVAKFIAKSND
EDGVATFLESKSYVYVD

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=262, Percent_Identity=28.6259541984733, Blast_Score=101, Evalue=6e-23,
Organism=Escherichia coli, GI87081790, Length=264, Percent_Identity=25.7575757575758, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI87081741, Length=247, Percent_Identity=23.4817813765182, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 29005; Mature: 29005

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIIISDLDGTLLRSDKTISEKSINILRECKNNGDELIFATARPPRAIKQYIPNVLKSE
CCEEEEECCCCCEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCC
IIICYNGALVLKGNNILYEMKISKNDILEIIEIANKYNLHEICLEIGDKLYSNFDVTDYF
EEEEECCEEEEECCCEEEEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHC
GNIPCEIIDVRDLDFEKASKAIICTNGPIKQKFIKELPDECRGVITDDGTLCQIMHAEVS
CCCCEEEEEECCCCHHHHCCEEEECCCCHHHHHHHHCCHHHCEEECCCCHHHHHHHHHHH
KWNSIQYVLQHLNRDVSEVIAFGDDYNDMEMIEKCGIGVAMSNAVEELKAVAKFIAKSND
CCHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
EDGVATFLESKSYVYVD
CCHHHHHHCCCCEEEEC
>Mature Secondary Structure
MKKIIISDLDGTLLRSDKTISEKSINILRECKNNGDELIFATARPPRAIKQYIPNVLKSE
CCEEEEECCCCCEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCC
IIICYNGALVLKGNNILYEMKISKNDILEIIEIANKYNLHEICLEIGDKLYSNFDVTDYF
EEEEECCEEEEECCCEEEEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHC
GNIPCEIIDVRDLDFEKASKAIICTNGPIKQKFIKELPDECRGVITDDGTLCQIMHAEVS
CCCCEEEEEECCCCHHHHCCEEEECCCCHHHHHHHHCCHHHCEEECCCCHHHHHHHHHHH
KWNSIQYVLQHLNRDVSEVIAFGDDYNDMEMIEKCGIGVAMSNAVEELKAVAKFIAKSND
CCHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
EDGVATFLESKSYVYVD
CCHHHHHHCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]