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The map label for this gene is ybhR [H]

Identifier: 227814647

GI number: 227814647

Start: 1871116

End: 1872135

Strand: Reverse

Name: ybhR [H]

Synonym: BAMEG_2057

Alternate gene names: 227814647

Gene position: 1872135-1871116 (Counterclockwise)

Preceding gene: 227814648

Following gene: 227814646

Centisome position: 35.8

GC content: 33.24

Gene sequence:

>1020_bases
ATGAGAGTAACCGGTGTAATCATTCGTATTATTCGCCAATTTTTTCGAGATAAACGTTCGTTAGCGATGATGTTTGGGGC
ACCTATGTTATTACTTTGGTTATTGTCACTAGTGTTTACACAAAAGGACTATGTACCGCATATTGCTGTTGTTGATATGC
CCGCTCAGTTAGTAAAAGTGATGAAAAATCAGGAAGCGTCAATTTATGAATATAATACAGAAAAGGCAATGTCTGAGCTA
GAAAATCAAAAGGTAGATGCAGTCATTCGTTTAGAAAATGGAAAAATGAATATTGTATTAGAAGGTAGTGATTCGTCAAA
AAATCGTGCTGTACTTCAAATATTACAAAAAAGTACAGAGAAGAACGATATATCGATAATGAAACCTGAAGTGAATTATT
TACATGGCTCTAAAGACTTTACAATGTTTGATGGGCTTGGCCCTGTATTGATTGGTTTCTTTACATTTTTCTTTGTATTT
ATTTTATCAGGGGTGTCTTTCGTAAGAGAACGTTTAAGCGGTGCGTTAGAAAGGTTATTATCAACTCCAATTAAAAGATG
GGAAATAGTTGTAGGATATATTATTGGTTTTGGGATCTTTGCATTTATACAATCCATTATAATTGTAAGTTTTTCAGTTT
ATATTTTAGACTTGTATGTAGCTGGCTCTATATGGCTAACGCTACTTATTACATGTATGCTTTCTTTAACGGCATTAACT
TTAGGGACATTTTTATCAGCATACGCAAATAATGAATTTCAAATGATTCAGTTTATACCGCTTGTCATTGTGCCACAAAT
ATTCTTTTCTGGTTTGTTTCCAATTGAATCGATGAATAAGTGGCTCCAAATGTTAGGGAAATTATTTCCGCTCACATACG
GCGCTGACGCAATGAGACAGGTGATGATTCGAAATCAAGGATTTACAGAGATTGCATTAGATTTAACTGTTTTACTATTT
TTCTCAGTATTATTTGCAGTAGGGAATGTATTTGCATTAAAGAAACATCGAAAAATATAA

Upstream 100 bases:

>100_bases
AAGGAAAGCTAGTTGCGACTGGTACAACTGAAGAATTGAAAAAGCGGGTATCATCAGGAAGGATTGAAGATGTCTTTTTG
TTGGAAGAGGTGGCTGAATT

Downstream 100 bases:

>100_bases
TGATGATACAAAGGGGTATTATAGATGAAGAAGGATTGGTTGGAAGAATTAATTGCCGCAACAAATACAGACAAACGAAA
TGAACGTCAAATGCGTATAT

Product: putative ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MRVTGVIIRIIRQFFRDKRSLAMMFGAPMLLLWLLSLVFTQKDYVPHIAVVDMPAQLVKVMKNQEASIYEYNTEKAMSEL
ENQKVDAVIRLENGKMNIVLEGSDSSKNRAVLQILQKSTEKNDISIMKPEVNYLHGSKDFTMFDGLGPVLIGFFTFFFVF
ILSGVSFVRERLSGALERLLSTPIKRWEIVVGYIIGFGIFAFIQSIIIVSFSVYILDLYVAGSIWLTLLITCMLSLTALT
LGTFLSAYANNEFQMIQFIPLVIVPQIFFSGLFPIESMNKWLQMLGKLFPLTYGADAMRQVMIRNQGFTEIALDLTVLLF
FSVLFAVGNVFALKKHRKI

Sequences:

>Translated_339_residues
MRVTGVIIRIIRQFFRDKRSLAMMFGAPMLLLWLLSLVFTQKDYVPHIAVVDMPAQLVKVMKNQEASIYEYNTEKAMSEL
ENQKVDAVIRLENGKMNIVLEGSDSSKNRAVLQILQKSTEKNDISIMKPEVNYLHGSKDFTMFDGLGPVLIGFFTFFFVF
ILSGVSFVRERLSGALERLLSTPIKRWEIVVGYIIGFGIFAFIQSIIIVSFSVYILDLYVAGSIWLTLLITCMLSLTALT
LGTFLSAYANNEFQMIQFIPLVIVPQIFFSGLFPIESMNKWLQMLGKLFPLTYGADAMRQVMIRNQGFTEIALDLTVLLF
FSVLFAVGNVFALKKHRKI
>Mature_339_residues
MRVTGVIIRIIRQFFRDKRSLAMMFGAPMLLLWLLSLVFTQKDYVPHIAVVDMPAQLVKVMKNQEASIYEYNTEKAMSEL
ENQKVDAVIRLENGKMNIVLEGSDSSKNRAVLQILQKSTEKNDISIMKPEVNYLHGSKDFTMFDGLGPVLIGFFTFFFVF
ILSGVSFVRERLSGALERLLSTPIKRWEIVVGYIIGFGIFAFIQSIIIVSFSVYILDLYVAGSIWLTLLITCMLSLTALT
LGTFLSAYANNEFQMIQFIPLVIVPQIFFSGLFPIESMNKWLQMLGKLFPLTYGADAMRQVMIRNQGFTEIALDLTVLLF
FSVLFAVGNVFALKKHRKI

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787010, Length=225, Percent_Identity=24, Blast_Score=79, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 38545; Mature: 38545

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVTGVIIRIIRQFFRDKRSLAMMFGAPMLLLWLLSLVFTQKDYVPHIAVVDMPAQLVKV
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHH
MKNQEASIYEYNTEKAMSELENQKVDAVIRLENGKMNIVLEGSDSSKNRAVLQILQKSTE
HHCCCCCEEEECHHHHHHHHHCCCCCEEEEEECCEEEEEEECCCCCCHHHHHHHHHHHCC
KNDISIMKPEVNYLHGSKDFTMFDGLGPVLIGFFTFFFVFILSGVSFVRERLSGALERLL
CCCCEEECCCHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STPIKRWEIVVGYIIGFGIFAFIQSIIIVSFSVYILDLYVAGSIWLTLLITCMLSLTALT
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGTFLSAYANNEFQMIQFIPLVIVPQIFFSGLFPIESMNKWLQMLGKLFPLTYGADAMRQ
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHH
VMIRNQGFTEIALDLTVLLFFSVLFAVGNVFALKKHRKI
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRVTGVIIRIIRQFFRDKRSLAMMFGAPMLLLWLLSLVFTQKDYVPHIAVVDMPAQLVKV
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHH
MKNQEASIYEYNTEKAMSELENQKVDAVIRLENGKMNIVLEGSDSSKNRAVLQILQKSTE
HHCCCCCEEEECHHHHHHHHHCCCCCEEEEEECCEEEEEEECCCCCCHHHHHHHHHHHCC
KNDISIMKPEVNYLHGSKDFTMFDGLGPVLIGFFTFFFVFILSGVSFVRERLSGALERLL
CCCCEEECCCHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STPIKRWEIVVGYIIGFGIFAFIQSIIIVSFSVYILDLYVAGSIWLTLLITCMLSLTALT
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGTFLSAYANNEFQMIQFIPLVIVPQIFFSGLFPIESMNKWLQMLGKLFPLTYGADAMRQ
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHH
VMIRNQGFTEIALDLTVLLFFSVLFAVGNVFALKKHRKI
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]