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The map label for this gene is yxdM [H]

Identifier: 227814581

GI number: 227814581

Start: 1811709

End: 1812356

Strand: Reverse

Name: yxdM [H]

Synonym: BAMEG_1991

Alternate gene names: 227814581

Gene position: 1812356-1811709 (Counterclockwise)

Preceding gene: 227814582

Following gene: 227814580

Centisome position: 34.65

GC content: 30.56

Gene sequence:

>648_bases
GTGAAGAAAACTGTAGAGAATTTAGTTTTACCACATGATTCTAGTAGTATTTATATTGCTGTTCAAGATCATGTGTATAA
TGAAATTCCTCTGACGAGTAATCCAGAGGATAAAGATATTCAATATCGTACTTACGGATTTGTTGTAGATGATTGGATAA
GAACGAAAGAGATTTCAAATCAATTAAAGAGTATATTCGATAAAGATCTTAGGGACAGTGATTTCTACTTTGTAGCTTTA
ACATTAAACTTGTTGGAGGCAAAGCAAAAGAATGGTTTATTACTTATGGCAAGTGTTTTAGTCGGAATCGTTTTCTTTAC
ATTTGCTGCTAGTTTTATTTATTTCCGATTATACACTGATTTGGACCGTGATCAACAACAATATAAAATGATTTCGAAAA
TGGGATTAAGTAAACAAGAGTTAAAAAAAGTTGTAACGAGACAGTTATTATTAATGTTCTTCTTACCGATTGCTGTTGCG
GTGATTCATACTGTAGTAGCGTATACGGCACTGCAACAATTAGTTAGTTTTTCTATTTTAAATAGCTCGATTGTTATTTT
AATTTCATTTATATGTATACAAGTTTTATATTTCTTTATTACTCGTTGGCGTTACCTACAAAAGCTTTATAAGACTATGG
AGCAATAA

Upstream 100 bases:

>100_bases
TACTAATCCCTGGGAGGGTGTCACAAAAGCAAGAATTTAAAAATGGTGACTATAAAAAAATATTGAAGTCATTCAAGGAG
ATTGGACAAAGACATTTCGT

Downstream 100 bases:

>100_bases
AGGATATCAACTAATAAAATTACAGAAAAACATGTAAAAAATGATATGAATTATGAAAGGAACCGTGATGAAAAGAACTT
TAACTATTTTTATGTTAACT

Product: ABC transporter, permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MKKTVENLVLPHDSSSIYIAVQDHVYNEIPLTSNPEDKDIQYRTYGFVVDDWIRTKEISNQLKSIFDKDLRDSDFYFVAL
TLNLLEAKQKNGLLLMASVLVGIVFFTFAASFIYFRLYTDLDRDQQQYKMISKMGLSKQELKKVVTRQLLLMFFLPIAVA
VIHTVVAYTALQQLVSFSILNSSIVILISFICIQVLYFFITRWRYLQKLYKTMEQ

Sequences:

>Translated_215_residues
MKKTVENLVLPHDSSSIYIAVQDHVYNEIPLTSNPEDKDIQYRTYGFVVDDWIRTKEISNQLKSIFDKDLRDSDFYFVAL
TLNLLEAKQKNGLLLMASVLVGIVFFTFAASFIYFRLYTDLDRDQQQYKMISKMGLSKQELKKVVTRQLLLMFFLPIAVA
VIHTVVAYTALQQLVSFSILNSSIVILISFICIQVLYFFITRWRYLQKLYKTMEQ
>Mature_215_residues
MKKTVENLVLPHDSSSIYIAVQDHVYNEIPLTSNPEDKDIQYRTYGFVVDDWIRTKEISNQLKSIFDKDLRDSDFYFVAL
TLNLLEAKQKNGLLLMASVLVGIVFFTFAASFIYFRLYTDLDRDQQQYKMISKMGLSKQELKKVVTRQLLLMFFLPIAVA
VIHTVVAYTALQQLVSFSILNSSIVILISFICIQVLYFFITRWRYLQKLYKTMEQ

Specific function: Part of the ABC transporter complex yxdLM which could be involved in peptide resistance [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 25159; Mature: 25159

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTVENLVLPHDSSSIYIAVQDHVYNEIPLTSNPEDKDIQYRTYGFVVDDWIRTKEISN
CCCCHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHH
QLKSIFDKDLRDSDFYFVALTLNLLEAKQKNGLLLMASVLVGIVFFTFAASFIYFRLYTD
HHHHHHHHCCCCCCEEEHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH
LDRDQQQYKMISKMGLSKQELKKVVTRQLLLMFFLPIAVAVIHTVVAYTALQQLVSFSIL
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NSSIVILISFICIQVLYFFITRWRYLQKLYKTMEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKTVENLVLPHDSSSIYIAVQDHVYNEIPLTSNPEDKDIQYRTYGFVVDDWIRTKEISN
CCCCHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHH
QLKSIFDKDLRDSDFYFVALTLNLLEAKQKNGLLLMASVLVGIVFFTFAASFIYFRLYTD
HHHHHHHHCCCCCCEEEHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH
LDRDQQQYKMISKMGLSKQELKKVVTRQLLLMFFLPIAVAVIHTVVAYTALQQLVSFSIL
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NSSIVILISFICIQVLYFFITRWRYLQKLYKTMEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8867804; 9384377; 7952181 [H]