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The map label for this gene is yobV [H]

Identifier: 227814528

GI number: 227814528

Start: 1761530

End: 1762492

Strand: Reverse

Name: yobV [H]

Synonym: BAMEG_1936

Alternate gene names: 227814528

Gene position: 1762492-1761530 (Counterclockwise)

Preceding gene: 227814530

Following gene: 227814527

Centisome position: 33.7

GC content: 32.19

Gene sequence:

>963_bases
ATGCCTAAAATTGACAATATGCTAGCAATTCTATGGATGCTTCGTTCAGGTAAAAAAATTACTGCAAAGCAAACTTCAGA
AAAGTTAGAGATAAATGTAAGGACTGTGTATCGTTATATTGATACAATTTCAACTAGTGGCGTACCTATAATTTCAGAAC
CAGGACATAACGGTGGATACACTTTATTGAACAATTTTATAGAGGCTCCTCTTTTTTTTGATTTTGAGGAGCAAACTTCA
CTATATCACGCTGCTGTTTTTGCAGAAGAAGCCGGATATTATGGAGGTGAAGCATTAAATAGGGCCATTTCAAAACTAAG
TAAATACTCAAATCAAGAGCAGGAAACAAAGATAAACCAACATTTAACTAGTCTTGAAGTAATAAGTCGATTAAGTCCAC
TCTCTATAGAAACTTTTTTGAAGGAGTTGGAGCAGGCCGTAGCTGACGGGTACTCAGTAAAAATTCTTTACCATAAAAGT
GGTGAAAAGCAATTAAATTATAGATTGGTCGATCCATACAGAATTATCTATTGGAATAATAAGTGGTATGTGATTGGATT
TTGTCATCTTAGGAATGATATCCGTAGTTTTAGAGTAGATCGAATTGAAAGTCTAATGCAAACCGAAAATAAGTTTAACC
AGCCAGAAGATTTTTCAGCAAGTGACTTTTTTATAAAAAGTCTTCTTCCAACTATAGAAGATAAGGAAAGTATTATTTCT
TTGGTTATTAATGGGGATAAAAGTGTATTGGCTGATATTTGCCAACATTGGTTTTTAGGACATTATTTACAAGAACGAAC
TTCAAATCAAGCAGTTTTTCTTCTGGACAAAGATATGATACATAAATATGTACCTTATTTACTTTTACCGTACAATAAAT
CTATCAAAGTTATTGAGCCAATAAGTCTGAAGAATAGAATTATTGAAGTTCTATCTGAATTAATAAAATTTCACCAAGTA
TGA

Upstream 100 bases:

>100_bases
CTAATGATATAGAAAGCCATTGGAAAGGAACAGTTGATGAGTTATACCAAAAATCAGAAATATATAATAGAAAATAAGTT
TCATATAGAGGTGGAATTAT

Downstream 100 bases:

>100_bases
TAACTTCCCTGACGTTAACTGTCAGGGAAGTTATATTATAATAGCTATATAAATTGAGATTGGAGTGTTATTGGATGCAA
ACAAAAAAAGCTTTTCTATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MPKIDNMLAILWMLRSGKKITAKQTSEKLEINVRTVYRYIDTISTSGVPIISEPGHNGGYTLLNNFIEAPLFFDFEEQTS
LYHAAVFAEEAGYYGGEALNRAISKLSKYSNQEQETKINQHLTSLEVISRLSPLSIETFLKELEQAVADGYSVKILYHKS
GEKQLNYRLVDPYRIIYWNNKWYVIGFCHLRNDIRSFRVDRIESLMQTENKFNQPEDFSASDFFIKSLLPTIEDKESIIS
LVINGDKSVLADICQHWFLGHYLQERTSNQAVFLLDKDMIHKYVPYLLLPYNKSIKVIEPISLKNRIIEVLSELIKFHQV

Sequences:

>Translated_320_residues
MPKIDNMLAILWMLRSGKKITAKQTSEKLEINVRTVYRYIDTISTSGVPIISEPGHNGGYTLLNNFIEAPLFFDFEEQTS
LYHAAVFAEEAGYYGGEALNRAISKLSKYSNQEQETKINQHLTSLEVISRLSPLSIETFLKELEQAVADGYSVKILYHKS
GEKQLNYRLVDPYRIIYWNNKWYVIGFCHLRNDIRSFRVDRIESLMQTENKFNQPEDFSASDFFIKSLLPTIEDKESIIS
LVINGDKSVLADICQHWFLGHYLQERTSNQAVFLLDKDMIHKYVPYLLLPYNKSIKVIEPISLKNRIIEVLSELIKFHQV
>Mature_319_residues
PKIDNMLAILWMLRSGKKITAKQTSEKLEINVRTVYRYIDTISTSGVPIISEPGHNGGYTLLNNFIEAPLFFDFEEQTSL
YHAAVFAEEAGYYGGEALNRAISKLSKYSNQEQETKINQHLTSLEVISRLSPLSIETFLKELEQAVADGYSVKILYHKSG
EKQLNYRLVDPYRIIYWNNKWYVIGFCHLRNDIRSFRVDRIESLMQTENKFNQPEDFSASDFFIKSLLPTIEDKESIISL
VINGDKSVLADICQHWFLGHYLQERTSNQAVFLLDKDMIHKYVPYLLLPYNKSIKVIEPISLKNRIIEVLSELIKFHQV

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR001034
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 37116; Mature: 36985

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKIDNMLAILWMLRSGKKITAKQTSEKLEINVRTVYRYIDTISTSGVPIISEPGHNGGY
CCCHHHHHHHHHHHHCCCEEEHHCCCCHHEEHHHHHHHHHHHHCCCCCEEEECCCCCCCH
TLLNNFIEAPLFFDFEEQTSLYHAAVFAEEAGYYGGEALNRAISKLSKYSNQEQETKINQ
HHHHHHHCCCEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH
HLTSLEVISRLSPLSIETFLKELEQAVADGYSVKILYHKSGEKQLNYRLVDPYRIIYWNN
HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCEECEEEECCEEEEEECC
KWYVIGFCHLRNDIRSFRVDRIESLMQTENKFNQPEDFSASDFFIKSLLPTIEDKESIIS
EEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHEEE
LVINGDKSVLADICQHWFLGHYLQERTSNQAVFLLDKDMIHKYVPYLLLPYNKSIKVIEP
EEECCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHCCEEEECCCCCEEEECC
ISLKNRIIEVLSELIKFHQV
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PKIDNMLAILWMLRSGKKITAKQTSEKLEINVRTVYRYIDTISTSGVPIISEPGHNGGY
CCHHHHHHHHHHHHCCCEEEHHCCCCHHEEHHHHHHHHHHHHCCCCCEEEECCCCCCCH
TLLNNFIEAPLFFDFEEQTSLYHAAVFAEEAGYYGGEALNRAISKLSKYSNQEQETKINQ
HHHHHHHCCCEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH
HLTSLEVISRLSPLSIETFLKELEQAVADGYSVKILYHKSGEKQLNYRLVDPYRIIYWNN
HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCEECEEEECCEEEEEECC
KWYVIGFCHLRNDIRSFRVDRIESLMQTENKFNQPEDFSASDFFIKSLLPTIEDKESIIS
EEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHEEE
LVINGDKSVLADICQHWFLGHYLQERTSNQAVFLLDKDMIHKYVPYLLLPYNKSIKVIEP
EEECCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHCCEEEECCCCCEEEECC
ISLKNRIIEVLSELIKFHQV
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]