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The map label for this gene is ydfC [H]

Identifier: 227814513

GI number: 227814513

Start: 1747128

End: 1748042

Strand: Reverse

Name: ydfC [H]

Synonym: BAMEG_1921

Alternate gene names: 227814513

Gene position: 1748042-1747128 (Counterclockwise)

Preceding gene: 227814514

Following gene: 227814512

Centisome position: 33.42

GC content: 33.33

Gene sequence:

>915_bases
ATGAATTATAAAAAATGGGATTTACGCATTATATGTGCTCACGCTTTTACGATTCTTATATGGGGATCTGCTTTTCCAGC
AATCCGTATGGGGCTTGAATCTTATACGCCTGAGCATCTGACTTTACTACGTTTATTAATTGCTTCAGTTATACTTCTTT
TGTTTTCCTTTATATATAAGTTACGGCTACCGGATTTAAAGGATATCCCAGCCATTTTTATATTTGGTGCTTTAGGATTT
ACTTTTTATCACATTGCACTAAACTATGGTGAAAAAACAGTAAATGCTGGATCTGCAAGTTTAATTGTTTCAGTCACGCC
TATAGTAACGGCAATATTCGCTTCTGTTTTTATGAATGAAAAAATGAAATTAAATGGTTGGATCGGTGGTGTAATTAGTT
TTATAGGAATTGCTTTCATATCATTTAGTCAAGGAGATGCTATTCAATTAAATAGTGGGGCATTATTTATATTATTAGCA
GCGATTTCAGAAAGCTTATTTTTCGTTTTCCAATCTTCTTACTTAAAAAAGTACGGTTTCTTGCCATTTACCATATATAC
AATTTTATCTAGTACGGTATGTATGCTTATTTTCTTACCAGGAATGTATCAAGAAATACTAGCAGCTCCTCTTGAAGTTA
ACTTGAGCGTTATATATTTAGGTGTCTTTCCAACAGTACTCCCATATATTGCATTGGCCTATATTATATCTCGTGCTGGT
GCTTCTGAAGCAACAAGTTCTCTATATTTAACGCCAATAACTGCATGTTTTGTCGCTTGGATATGGTTAGGAGAAGTGCC
AACTTTAGTTTCGATAATTGGCGGAGGGATTACTATACTTGGAATTGTGATTGTTCATATACCAGTATTAAGAAAAGAAA
AACATAGCAATTTAGCAAATAATCAATCCGTATAA

Upstream 100 bases:

>100_bases
CGATAAAAAACTGGTTGAAGACATTGTATCAACTATTAAATATGATGAAAAGAAATAATTGGTAATTTGAAAATGGTTGG
TTTGAAGGGGGAGAGAAAAC

Downstream 100 bases:

>100_bases
TGTAATTAAATAATGATTTTATGATACTTTTTTATATAGTTTCTTTCTCATGTTGATAAATATAATATTTTGTATTTCAG
TTAAATATTGTATGTTACAT

Product: transporter, EamA family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MNYKKWDLRIICAHAFTILIWGSAFPAIRMGLESYTPEHLTLLRLLIASVILLLFSFIYKLRLPDLKDIPAIFIFGALGF
TFYHIALNYGEKTVNAGSASLIVSVTPIVTAIFASVFMNEKMKLNGWIGGVISFIGIAFISFSQGDAIQLNSGALFILLA
AISESLFFVFQSSYLKKYGFLPFTIYTILSSTVCMLIFLPGMYQEILAAPLEVNLSVIYLGVFPTVLPYIALAYIISRAG
ASEATSSLYLTPITACFVAWIWLGEVPTLVSIIGGGITILGIVIVHIPVLRKEKHSNLANNQSV

Sequences:

>Translated_304_residues
MNYKKWDLRIICAHAFTILIWGSAFPAIRMGLESYTPEHLTLLRLLIASVILLLFSFIYKLRLPDLKDIPAIFIFGALGF
TFYHIALNYGEKTVNAGSASLIVSVTPIVTAIFASVFMNEKMKLNGWIGGVISFIGIAFISFSQGDAIQLNSGALFILLA
AISESLFFVFQSSYLKKYGFLPFTIYTILSSTVCMLIFLPGMYQEILAAPLEVNLSVIYLGVFPTVLPYIALAYIISRAG
ASEATSSLYLTPITACFVAWIWLGEVPTLVSIIGGGITILGIVIVHIPVLRKEKHSNLANNQSV
>Mature_304_residues
MNYKKWDLRIICAHAFTILIWGSAFPAIRMGLESYTPEHLTLLRLLIASVILLLFSFIYKLRLPDLKDIPAIFIFGALGF
TFYHIALNYGEKTVNAGSASLIVSVTPIVTAIFASVFMNEKMKLNGWIGGVISFIGIAFISFSQGDAIQLNSGALFILLA
AISESLFFVFQSSYLKKYGFLPFTIYTILSSTVCMLIFLPGMYQEILAAPLEVNLSVIYLGVFPTVLPYIALAYIISRAG
ASEATSSLYLTPITACFVAWIWLGEVPTLVSIIGGGITILGIVIVHIPVLRKEKHSNLANNQSV

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI1788269, Length=271, Percent_Identity=26.5682656826568, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 33381; Mature: 33381

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYKKWDLRIICAHAFTILIWGSAFPAIRMGLESYTPEHLTLLRLLIASVILLLFSFIYK
CCCCHHHHEEHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
LRLPDLKDIPAIFIFGALGFTFYHIALNYGEKTVNAGSASLIVSVTPIVTAIFASVFMNE
HCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCEEEEEHHHHHHHHHHHHHHCC
KMKLNGWIGGVISFIGIAFISFSQGDAIQLNSGALFILLAAISESLFFVFQSSYLKKYGF
CEEECHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
LPFTIYTILSSTVCMLIFLPGMYQEILAAPLEVNLSVIYLGVFPTVLPYIALAYIISRAG
CHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCC
ASEATSSLYLTPITACFVAWIWLGEVPTLVSIIGGGITILGIVIVHIPVLRKEKHSNLAN
CCHHHCCEEHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC
NQSV
CCCC
>Mature Secondary Structure
MNYKKWDLRIICAHAFTILIWGSAFPAIRMGLESYTPEHLTLLRLLIASVILLLFSFIYK
CCCCHHHHEEHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
LRLPDLKDIPAIFIFGALGFTFYHIALNYGEKTVNAGSASLIVSVTPIVTAIFASVFMNE
HCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCEEEEEHHHHHHHHHHHHHHCC
KMKLNGWIGGVISFIGIAFISFSQGDAIQLNSGALFILLAAISESLFFVFQSSYLKKYGF
CEEECHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
LPFTIYTILSSTVCMLIFLPGMYQEILAAPLEVNLSVIYLGVFPTVLPYIALAYIISRAG
CHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCC
ASEATSSLYLTPITACFVAWIWLGEVPTLVSIIGGGITILGIVIVHIPVLRKEKHSNLAN
CCHHHCCEEHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC
NQSV
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]