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The map label for this gene is yngC [H]

Identifier: 227814345

GI number: 227814345

Start: 1600202

End: 1600816

Strand: Reverse

Name: yngC [H]

Synonym: BAMEG_1753

Alternate gene names: 227814345

Gene position: 1600816-1600202 (Counterclockwise)

Preceding gene: 227814346

Following gene: 227814343

Centisome position: 30.61

GC content: 35.12

Gene sequence:

>615_bases
ATGGTAAGTAGTTTTATTCACTCAGTATTAACATTTTTTGAAGGGCTAGGTTATTGGGGCATTATGCTTGGACTTATGAT
TGAGATTATTCCAAGTGAGATTGTCCTTGCTTATGCGGGATACTTAGTATTCAATGGTAGTATCTCATTTTTAGGCGCAG
TTGTGTTTGGTACAATTGGTGGTGTTATTGCTCAAATCTTTATTTATTGGATTGGCCGATACGGCGGACGCCCTATATTA
GAACGTTATGGAAAATATATTTTCATACATAAAAAACAAATAGATGCTGCAGAAGATTGGTTTAATCGTTACGGAACTGG
CGTCATTTTTACAGCACGCTTCATTCCAGTAGTGCGTCATGCGATTTCAATTCCTGCTGGTATTACAAAAATGTCATTCC
TACGTTTCACTACGTTAACAGCACTCGCAATCATCCCTTGGTCTATCATTTTCATTTACTTAGGTGAAAAACTAGGTGAA
AATTGGGAGAATATTAATGATATCGCTGGACCATATGTGAAATCATTCGCAATTGGTGGCGTCATACTTATTTTTTTATA
CTTCGTTATAAAAAAATGGACAAAAAACGTAAAAATCTTGCGTAAAAATATATAA

Upstream 100 bases:

>100_bases
CCCCTATACAAATAAGGTATAATCTACACATAGTGAATCTTTTATATTATTAACTATAAGGTTCACCTATTCAAAAATAC
ATAAACTAGAAGGTGCAACA

Downstream 100 bases:

>100_bases
TAAAAACCGCTATACATTCATTACGAATGTTAGCGGTTTTTATTATAGGCTTGATTTTGTATTAGAAATTGTATTATTTC
TTCTTTGTGCTTTAAGTCAT

Product: dedA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MVSSFIHSVLTFFEGLGYWGIMLGLMIEIIPSEIVLAYAGYLVFNGSISFLGAVVFGTIGGVIAQIFIYWIGRYGGRPIL
ERYGKYIFIHKKQIDAAEDWFNRYGTGVIFTARFIPVVRHAISIPAGITKMSFLRFTTLTALAIIPWSIIFIYLGEKLGE
NWENINDIAGPYVKSFAIGGVILIFLYFVIKKWTKNVKILRKNI

Sequences:

>Translated_204_residues
MVSSFIHSVLTFFEGLGYWGIMLGLMIEIIPSEIVLAYAGYLVFNGSISFLGAVVFGTIGGVIAQIFIYWIGRYGGRPIL
ERYGKYIFIHKKQIDAAEDWFNRYGTGVIFTARFIPVVRHAISIPAGITKMSFLRFTTLTALAIIPWSIIFIYLGEKLGE
NWENINDIAGPYVKSFAIGGVILIFLYFVIKKWTKNVKILRKNI
>Mature_204_residues
MVSSFIHSVLTFFEGLGYWGIMLGLMIEIIPSEIVLAYAGYLVFNGSISFLGAVVFGTIGGVIAQIFIYWIGRYGGRPIL
ERYGKYIFIHKKQIDAAEDWFNRYGTGVIFTARFIPVVRHAISIPAGITKMSFLRFTTLTALAIIPWSIIFIYLGEKLGE
NWENINDIAGPYVKSFAIGGVILIFLYFVIKKWTKNVKILRKNI

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 23050; Mature: 23050

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSSFIHSVLTFFEGLGYWGIMLGLMIEIIPSEIVLAYAGYLVFNGSISFLGAVVFGTIG
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
GVIAQIFIYWIGRYGGRPILERYGKYIFIHKKQIDAAEDWFNRYGTGVIFTARFIPVVRH
HHHHHHHHHHHHHCCCCHHHHHCCCEEEEEHHHCCHHHHHHHHHCCCHHHHHHHHHHHHH
AISIPAGITKMSFLRFTTLTALAIIPWSIIFIYLGEKLGENWENINDIAGPYVKSFAIGG
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
VILIFLYFVIKKWTKNVKILRKNI
HHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVSSFIHSVLTFFEGLGYWGIMLGLMIEIIPSEIVLAYAGYLVFNGSISFLGAVVFGTIG
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
GVIAQIFIYWIGRYGGRPILERYGKYIFIHKKQIDAAEDWFNRYGTGVIFTARFIPVVRH
HHHHHHHHHHHHHCCCCHHHHHCCCEEEEEHHHCCHHHHHHHHHCCCHHHHHHHHHHHHH
AISIPAGITKMSFLRFTTLTALAIIPWSIIFIYLGEKLGENWENINDIAGPYVKSFAIGG
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
VILIFLYFVIKKWTKNVKILRKNI
HHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]