Click here to switch to the map view.

The map label for this gene is ykkA [H]

Identifier: 227814259

GI number: 227814259

Start: 1533279

End: 1533800

Strand: Direct

Name: ykkA [H]

Synonym: BAMEG_1667

Alternate gene names: 227814259

Gene position: 1533279-1533800 (Clockwise)

Preceding gene: 227814258

Following gene: 227814260

Centisome position: 29.32

GC content: 34.67

Gene sequence:

>522_bases
ATGAAAGATCTCTATTTAGAAAAAAATATGAACCCGCAAGTAGCAATTCTATATGCGACAGTTGCCGATACATTTAAACG
GTTGCAAAAGTTAGTAGAGGGTACTGATGAGAAAGAACTGTCTTTTAAAGGGTTAAAAAATAATGAAAATAGTATTGGAC
AACTACTTCAACATTTAGCAGTTGTCGATTTGCATTGGGTATACCGCTTAAAAGGAGAACCCGTTCCACTGGCACTTGAT
AATATATATGGACCTATGTTAAATGAAGCAGGAGAGCTGCCCAGTTTAAGAAAACATACATTGCAACAATTAATGCAAGA
TTATGAAGCAGTGCAACATATGTTTTATGAGGAATGTATGAAACTAACAGAAAATGATTTAACACGAGAGGTTTTTTATG
AAAAGGGAGAAAATGCGACTATAAGGTGGGGAATATGGCATATAGCTGATCATAATCGGTACCATCAAGCTCATATTAGT
CAGTTAAGAAAACTATATAGAGCTAGAATGCATACGAGATAA

Upstream 100 bases:

>100_bases
CTTTAAAACGTATGGGATTGAAAAGAGAGCTATAAAGATGAATGGTGTGTATAGTGATGATGAACATATGGTTTTGTTCC
TTTAAAAGAGGGAGTTTACT

Downstream 100 bases:

>100_bases
AGATTTCGAATTTTAATTATATTTAATTTGTTGTATAGTATAAGAAGAAACTAAACAAGGAGTTTTATAATGAAAGCTAT
TGCAGTAGGGATATTGGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MKDLYLEKNMNPQVAILYATVADTFKRLQKLVEGTDEKELSFKGLKNNENSIGQLLQHLAVVDLHWVYRLKGEPVPLALD
NIYGPMLNEAGELPSLRKHTLQQLMQDYEAVQHMFYEECMKLTENDLTREVFYEKGENATIRWGIWHIADHNRYHQAHIS
QLRKLYRARMHTR

Sequences:

>Translated_173_residues
MKDLYLEKNMNPQVAILYATVADTFKRLQKLVEGTDEKELSFKGLKNNENSIGQLLQHLAVVDLHWVYRLKGEPVPLALD
NIYGPMLNEAGELPSLRKHTLQQLMQDYEAVQHMFYEECMKLTENDLTREVFYEKGENATIRWGIWHIADHNRYHQAHIS
QLRKLYRARMHTR
>Mature_173_residues
MKDLYLEKNMNPQVAILYATVADTFKRLQKLVEGTDEKELSFKGLKNNENSIGQLLQHLAVVDLHWVYRLKGEPVPLALD
NIYGPMLNEAGELPSLRKHTLQQLMQDYEAVQHMFYEECMKLTENDLTREVFYEKGENATIRWGIWHIADHNRYHQAHIS
QLRKLYRARMHTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007061 [H]

Pfam domain/function: PF04978 DUF664 [H]

EC number: NA

Molecular weight: Translated: 20438; Mature: 20438

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDLYLEKNMNPQVAILYATVADTFKRLQKLVEGTDEKELSFKGLKNNENSIGQLLQHLA
CCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHH
VVDLHWVYRLKGEPVPLALDNIYGPMLNEAGELPSLRKHTLQQLMQDYEAVQHMFYEECM
HHHHHHHHEECCCCCCEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KLTENDLTREVFYEKGENATIRWGIWHIADHNRYHQAHISQLRKLYRARMHTR
HHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKDLYLEKNMNPQVAILYATVADTFKRLQKLVEGTDEKELSFKGLKNNENSIGQLLQHLA
CCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHH
VVDLHWVYRLKGEPVPLALDNIYGPMLNEAGELPSLRKHTLQQLMQDYEAVQHMFYEECM
HHHHHHHHEECCCCCCEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KLTENDLTREVFYEKGENATIRWGIWHIADHNRYHQAHISQLRKLYRARMHTR
HHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8682784; 9384377 [H]