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The map label for this gene is gerAB [H]

Identifier: 227814055

GI number: 227814055

Start: 1342837

End: 1343757

Strand: Direct

Name: gerAB [H]

Synonym: BAMEG_1462

Alternate gene names: 227814055

Gene position: 1342837-1343757 (Clockwise)

Preceding gene: 227814054

Following gene: 227814056

Centisome position: 25.68

GC content: 34.53

Gene sequence:

>921_bases
GTGATTACTATATCTAAAGACCGAATAACAACTGCACAAGCAGTTGTTATTATTGTAAATTACATACTGGGAACAGGAAT
CCTCACTCTGCCCAGAGCATCTGTAGAAAAAGTGAAAACACCAGATGTATGGTTAAGTGTGATATTAGGTGGGATACTCG
CAATGGTTTCAGGAGTAATTATGGTCAAACTAAGTCAGCAGTTTCCAGATAAAACATTTTATCAATACAGTCAAGATATT
GTAGGGAAATGGATAGGCAGGTTGCTTAGTTTTCTTATTATAGGGTATTTTCTTACAACTTCAGCCTTTCAAATTCGTTC
AATGGCAGAAGTAATAAGCTTTTTTTTGCTAGAAGGAACCCCCACATGGGCTATTGTTATGCCTTTTATGTGGATAGGTC
TCTATTTAATTATGAGTGGTATTAACTCGATTGCACGGATGTTTGAAATAATATTTCCTATTACTTTCTTTATTTTTTTA
CTCATTTCCTTTATGAGTATAGGGATATTCGAGATAGATAATCTCCGTCCCGTATTAGGTTTGGGAATTAAACCGGTGTT
AGATGGGGTTGTAACAAGAACATGGCCGACAATTGACCTTATGCGCAGTTTTGAAATTTCTGGTTTAATATTTGAACGTT
TTGAATCTTTACTGCTTGTAATATGGATTATGCAAATATTTGCTACCTATACAATTAGTTACTATGCAGCTGCATTAGGA
TTGGCACAACTCTTTAAAAAGAGTATTCATCCGTTTATTTTTGCTTTGATTCCAATCATTTACATCATTGCTATGACTTC
GAAAAATATAAATGATTTGCTTAAACTGGGGGATATGCTCGGTAATGCTGCTTTATTTTTATTTGGTTTACTGCCACTGC
TTCTTCTTATTATTAAGCGATTAAAAGGAGGAGTAGTGTGA

Upstream 100 bases:

>100_bases
TTCGCATGCCATTAAAAATAATGAGACGTCGACCGAAAATAATGCATACCAAAAAAACTAACCGCAAAAGGTAGCTGATG
ACGAAAGGAAGTGGGGTTCA

Downstream 100 bases:

>100_bases
AAAATAAATTTAATTATATGCGGTTCTATTTGGTTTTGTTATGTACGCTTTTGCTTCTATTTTTAACAGGATGTTGGAGC
AGTAAAGAAGTAGAAGAGTT

Product: spore germination protein GerAB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MITISKDRITTAQAVVIIVNYILGTGILTLPRASVEKVKTPDVWLSVILGGILAMVSGVIMVKLSQQFPDKTFYQYSQDI
VGKWIGRLLSFLIIGYFLTTSAFQIRSMAEVISFFLLEGTPTWAIVMPFMWIGLYLIMSGINSIARMFEIIFPITFFIFL
LISFMSIGIFEIDNLRPVLGLGIKPVLDGVVTRTWPTIDLMRSFEISGLIFERFESLLLVIWIMQIFATYTISYYAAALG
LAQLFKKSIHPFIFALIPIIYIIAMTSKNINDLLKLGDMLGNAALFLFGLLPLLLLIIKRLKGGVV

Sequences:

>Translated_306_residues
MITISKDRITTAQAVVIIVNYILGTGILTLPRASVEKVKTPDVWLSVILGGILAMVSGVIMVKLSQQFPDKTFYQYSQDI
VGKWIGRLLSFLIIGYFLTTSAFQIRSMAEVISFFLLEGTPTWAIVMPFMWIGLYLIMSGINSIARMFEIIFPITFFIFL
LISFMSIGIFEIDNLRPVLGLGIKPVLDGVVTRTWPTIDLMRSFEISGLIFERFESLLLVIWIMQIFATYTISYYAAALG
LAQLFKKSIHPFIFALIPIIYIIAMTSKNINDLLKLGDMLGNAALFLFGLLPLLLLIIKRLKGGVV
>Mature_306_residues
MITISKDRITTAQAVVIIVNYILGTGILTLPRASVEKVKTPDVWLSVILGGILAMVSGVIMVKLSQQFPDKTFYQYSQDI
VGKWIGRLLSFLIIGYFLTTSAFQIRSMAEVISFFLLEGTPTWAIVMPFMWIGLYLIMSGINSIARMFEIIFPITFFIFL
LISFMSIGIFEIDNLRPVLGLGIKPVLDGVVTRTWPTIDLMRSFEISGLIFERFESLLLVIWIMQIFATYTISYYAAALG
LAQLFKKSIHPFIFALIPIIYIIAMTSKNINDLLKLGDMLGNAALFLFGLLPLLLLIIKRLKGGVV

Specific function: Involved in the germinative response to L-alanine. Could be an amino acid transporter [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002293
- InterPro:   IPR004761 [H]

Pfam domain/function: PF03845 Spore_permease [H]

EC number: NA

Molecular weight: Translated: 34343; Mature: 34343

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITISKDRITTAQAVVIIVNYILGTGILTLPRASVEKVKTPDVWLSVILGGILAMVSGVI
CEECCCCHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHH
MVKLSQQFPDKTFYQYSQDIVGKWIGRLLSFLIIGYFLTTSAFQIRSMAEVISFFLLEGT
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PTWAIVMPFMWIGLYLIMSGINSIARMFEIIFPITFFIFLLISFMSIGIFEIDNLRPVLG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCHHHH
LGIKPVLDGVVTRTWPTIDLMRSFEISGLIFERFESLLLVIWIMQIFATYTISYYAAALG
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAQLFKKSIHPFIFALIPIIYIIAMTSKNINDLLKLGDMLGNAALFLFGLLPLLLLIIKR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKGGVV
HHCCCC
>Mature Secondary Structure
MITISKDRITTAQAVVIIVNYILGTGILTLPRASVEKVKTPDVWLSVILGGILAMVSGVI
CEECCCCHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHH
MVKLSQQFPDKTFYQYSQDIVGKWIGRLLSFLIIGYFLTTSAFQIRSMAEVISFFLLEGT
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PTWAIVMPFMWIGLYLIMSGINSIARMFEIIFPITFFIFLLISFMSIGIFEIDNLRPVLG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCHHHH
LGIKPVLDGVVTRTWPTIDLMRSFEISGLIFERFESLLLVIWIMQIFATYTISYYAAALG
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAQLFKKSIHPFIFALIPIIYIIAMTSKNINDLLKLGDMLGNAALFLFGLLPLLLLIIKR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKGGVV
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]