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The map label for this gene is ycaC [H]

Identifier: 227814038

GI number: 227814038

Start: 1324119

End: 1324763

Strand: Reverse

Name: ycaC [H]

Synonym: BAMEG_1445

Alternate gene names: 227814038

Gene position: 1324763-1324119 (Counterclockwise)

Preceding gene: 227814043

Following gene: 227814037

Centisome position: 25.33

GC content: 39.22

Gene sequence:

>645_bases
ATGACTGATCTCTATTCTCGTATTAACAAAGATGATGCTGTCGTGCTTTTAGTAGATCATCAAACTGGTCTTATGTCCGG
ACTAGTACGTGACTATGGTGTTGATGAATTTAAGAACAATGTTTTAGCTCTTGCTCACACTGCTAAGTTTTTTGATTTAC
CAGTTATTTTAACAACTAGCTTTGAAAACGGACCTAACGGACCTTTAATGCAAGAATTGGTTGATCTCTTTCCTCACGCA
CAAAAAATAGCTCGACCTGGACAAATTAACGCATGGGATAATGATGATTTTGTAAAAGCAATCGAAGAAACTGGAAAAAA
ACAACTTATCATCGCGGGCGTAGTTACGGACGTTTGTGTTGCTTTCCCGGCACTTTCCGCTATAAAAGCTGGATATGAAG
TATTTGCTGTTACTGATGCTTCAGGAACTTTCAGCAAACAAGTTGCAGATGCTGCCAATACGCGTATGGCACATAGTGGT
GTGCAACTTATGAACTGGTTTAGCGTAGCTTGCGAATTACAACGCGATTGGCGCAACGATGTCGAAGGTTTTGGCAATTT
ACTTGCTAGTAATCTTCCAGGTTATCAAAATATAATTGGAAGCTATATGGGAGCTCAACGAGATCTTAGTAAACAAAATG
CATAA

Upstream 100 bases:

>100_bases
CCAATATTATTGGTCAGCTTAGTTATAAACGAAGAAACTTATGATAGTATTCGACTATTAAAACTTTCTTCGATTACTTA
ATTTTTAGGAGGAATACATA

Downstream 100 bases:

>100_bases
ATGTATTCCACAGAAATAGCTTTAAATCACTTTTTTAAAGTAGATAGTATAAAATTAGTGCTGATTAAATCAGCACTAAT
TTTAAATTAAAAAGTATAGC

Product: isochorismatase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MTDLYSRINKDDAVVLLVDHQTGLMSGLVRDYGVDEFKNNVLALAHTAKFFDLPVILTTSFENGPNGPLMQELVDLFPHA
QKIARPGQINAWDNDDFVKAIEETGKKQLIIAGVVTDVCVAFPALSAIKAGYEVFAVTDASGTFSKQVADAANTRMAHSG
VQLMNWFSVACELQRDWRNDVEGFGNLLASNLPGYQNIIGSYMGAQRDLSKQNA

Sequences:

>Translated_214_residues
MTDLYSRINKDDAVVLLVDHQTGLMSGLVRDYGVDEFKNNVLALAHTAKFFDLPVILTTSFENGPNGPLMQELVDLFPHA
QKIARPGQINAWDNDDFVKAIEETGKKQLIIAGVVTDVCVAFPALSAIKAGYEVFAVTDASGTFSKQVADAANTRMAHSG
VQLMNWFSVACELQRDWRNDVEGFGNLLASNLPGYQNIIGSYMGAQRDLSKQNA
>Mature_213_residues
TDLYSRINKDDAVVLLVDHQTGLMSGLVRDYGVDEFKNNVLALAHTAKFFDLPVILTTSFENGPNGPLMQELVDLFPHAQ
KIARPGQINAWDNDDFVKAIEETGKKQLIIAGVVTDVCVAFPALSAIKAGYEVFAVTDASGTFSKQVADAANTRMAHSGV
QLMNWFSVACELQRDWRNDVEGFGNLLASNLPGYQNIIGSYMGAQRDLSKQNA

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787124, Length=202, Percent_Identity=64.3564356435644, Blast_Score=273, Evalue=7e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 23400; Mature: 23269

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLYSRINKDDAVVLLVDHQTGLMSGLVRDYGVDEFKNNVLALAHTAKFFDLPVILTTS
CCCHHHHCCCCCEEEEEEECCHHHHHHHHHHCCHHHHHCCEEEEEHHHHHHCCCEEEEEC
FENGPNGPLMQELVDLFPHAQKIARPGQINAWDNDDFVKAIEETGKKQLIIAGVVTDVCV
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEHHHHHHHHH
AFPALSAIKAGYEVFAVTDASGTFSKQVADAANTRMAHSGVQLMNWFSVACELQRDWRND
HHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEGFGNLLASNLPGYQNIIGSYMGAQRDLSKQNA
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TDLYSRINKDDAVVLLVDHQTGLMSGLVRDYGVDEFKNNVLALAHTAKFFDLPVILTTS
CCHHHHCCCCCEEEEEEECCHHHHHHHHHHCCHHHHHCCEEEEEHHHHHHCCCEEEEEC
FENGPNGPLMQELVDLFPHAQKIARPGQINAWDNDDFVKAIEETGKKQLIIAGVVTDVCV
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEHHHHHHHHH
AFPALSAIKAGYEVFAVTDASGTFSKQVADAANTRMAHSGVQLMNWFSVACELQRDWRND
HHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEGFGNLLASNLPGYQNIIGSYMGAQRDLSKQNA
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3062312; 8905232; 9278503; 9782055 [H]