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The map label for this gene is ytcJ [H]

Identifier: 227814035

GI number: 227814035

Start: 1320862

End: 1322325

Strand: Reverse

Name: ytcJ [H]

Synonym: BAMEG_1442

Alternate gene names: 227814035

Gene position: 1322325-1320862 (Counterclockwise)

Preceding gene: 227814036

Following gene: 227814027

Centisome position: 25.28

GC content: 40.44

Gene sequence:

>1464_bases
ATGCCAACTTTGGAAGAGATTAATGCTGTTTCTGAAGACACACCTGTCTTTGTGCTACATCTTTACGATAGAGCACTTGT
AAATCGTGCAGGGCTGCGTGCACTGGGATACACAAAAGATACCCCAGACCCTCCAGGTTGCTTAATTGAGCGGGATAAAC
GAGGGAATCCAACGGGCCTTTTAATTGCGAATCCTAACGCTTCTATTCTTTATTCAAGTTTGGGTAAAGCTCCCATACTT
AATTTTGACGACCAGATTAACTCAACTCGCCATTTTATGCGCGAATTAAATAGATTAGGTATTACAAGTGCCATTGACGC
AGGTGGCGGTTTCCAAAATTACCCTGACGACTACAGAGTTGTTGAACATTTAGCCGAGAAGGAACAATTAACTTTACGTA
TTGCTTATAATCTATTTACACAAAATCCTAATCATGAATATGAAGACTTTGCTTCATGGGCAAAAATTGTTTCTCCAGGT
CAAGGAAATGATAAGTATAAAATGAATGGTGCTGGAGAAATGTTAGTATTCTCTGCAGCTGATTTTGAAAAATTTCAAAT
GCCACGGCCCGAACTAGCTACGATGATGGAAGCTGACTTAAAGAAAGTAATTTCTCTATTGGTGGAAAACCGTTGGCCAT
TCCGTTTACATGCAACTTATGACGAGTCAATCACACGTTTCTTAAATGTATTTGAGGAAGTCAACAAAGAAATTCCTTTT
AATGGTCTACGATGGTGGTTTGACCATGCAGAAACAATCTCAGATCGTAGTATGGAACGTGTTAAGGCTTTAAATGGCGG
TATTGCCATCCAAGACCGCATGGCTTTTCAAGGTGAATACTTTGTTGATTTATACGGAAAGGAAGCTGCAAAGCGTACTC
CTCCGATTTATCGTATGTTAGACCTAGGTATACCTGTTGGCGCCGGTAGTGATGCAACTAGGGTTTCCAGCTATAACCCT
TGGGTTGCTCTTTACTGGATGGTTGCCGGAAAAACCATTGGTGGGCTTTCCATATACGACGAAAAAAATAAACTTGATAG
AAAAGTAGCCCTGGAATTATATTCAAAAGGAAGTGCGTGGTTCTCTGGTGATGAAGGTAAAAAGGGAACCCTTGCAGTAG
GTCAGTTTGCTGATATTGCTGTATTGTCTGCTGACTACTTTACTGTGCCAGAAGAAGAAATTAAAGACCTTGAATCATTA
CTTACCATTATGGGCGGACAGGTTGTTTATGGAAATGATGAATTTAAAAATTTATCACCTGAATTGCCGCCAGCATCACC
TGATTGGTCACCGACGGGAGTTTATGGTTATGGTGGTGCTAACTTAGCCCACACTATTCTTTCTCACGATTCCCATGATA
ACAAGTTACATAGTTGCAGTAACCCTCTCCATCAACATACTCATACCGTAATAGGAAAAGATGGAACTAAATGGGGTATT
GGTTGTACTTGCTTTGCTTTCTAA

Upstream 100 bases:

>100_bases
TGCTCTCGAAATGCTCAAAGAGCAGGCAAGGCGTACTCCTGCTCCTCAGTGAGTAAGAGTAGTTGGAGGTTGGTCTGAAT
TTCAATTTAAAGAGAGACGG

Downstream 100 bases:

>100_bases
GTCAAAACCACCGGTATAATGCCGGTGGTTTTCTTTATGCAATAAGAATACAGCAGTATATCCCTAATGGAATCTATTAC
TATGCGATAAGACCGAAGAG

Product: amidohydrolase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 487; Mature: 486

Protein sequence:

>487_residues
MPTLEEINAVSEDTPVFVLHLYDRALVNRAGLRALGYTKDTPDPPGCLIERDKRGNPTGLLIANPNASILYSSLGKAPIL
NFDDQINSTRHFMRELNRLGITSAIDAGGGFQNYPDDYRVVEHLAEKEQLTLRIAYNLFTQNPNHEYEDFASWAKIVSPG
QGNDKYKMNGAGEMLVFSAADFEKFQMPRPELATMMEADLKKVISLLVENRWPFRLHATYDESITRFLNVFEEVNKEIPF
NGLRWWFDHAETISDRSMERVKALNGGIAIQDRMAFQGEYFVDLYGKEAAKRTPPIYRMLDLGIPVGAGSDATRVSSYNP
WVALYWMVAGKTIGGLSIYDEKNKLDRKVALELYSKGSAWFSGDEGKKGTLAVGQFADIAVLSADYFTVPEEEIKDLESL
LTIMGGQVVYGNDEFKNLSPELPPASPDWSPTGVYGYGGANLAHTILSHDSHDNKLHSCSNPLHQHTHTVIGKDGTKWGI
GCTCFAF

Sequences:

>Translated_487_residues
MPTLEEINAVSEDTPVFVLHLYDRALVNRAGLRALGYTKDTPDPPGCLIERDKRGNPTGLLIANPNASILYSSLGKAPIL
NFDDQINSTRHFMRELNRLGITSAIDAGGGFQNYPDDYRVVEHLAEKEQLTLRIAYNLFTQNPNHEYEDFASWAKIVSPG
QGNDKYKMNGAGEMLVFSAADFEKFQMPRPELATMMEADLKKVISLLVENRWPFRLHATYDESITRFLNVFEEVNKEIPF
NGLRWWFDHAETISDRSMERVKALNGGIAIQDRMAFQGEYFVDLYGKEAAKRTPPIYRMLDLGIPVGAGSDATRVSSYNP
WVALYWMVAGKTIGGLSIYDEKNKLDRKVALELYSKGSAWFSGDEGKKGTLAVGQFADIAVLSADYFTVPEEEIKDLESL
LTIMGGQVVYGNDEFKNLSPELPPASPDWSPTGVYGYGGANLAHTILSHDSHDNKLHSCSNPLHQHTHTVIGKDGTKWGI
GCTCFAF
>Mature_486_residues
PTLEEINAVSEDTPVFVLHLYDRALVNRAGLRALGYTKDTPDPPGCLIERDKRGNPTGLLIANPNASILYSSLGKAPILN
FDDQINSTRHFMRELNRLGITSAIDAGGGFQNYPDDYRVVEHLAEKEQLTLRIAYNLFTQNPNHEYEDFASWAKIVSPGQ
GNDKYKMNGAGEMLVFSAADFEKFQMPRPELATMMEADLKKVISLLVENRWPFRLHATYDESITRFLNVFEEVNKEIPFN
GLRWWFDHAETISDRSMERVKALNGGIAIQDRMAFQGEYFVDLYGKEAAKRTPPIYRMLDLGIPVGAGSDATRVSSYNPW
VALYWMVAGKTIGGLSIYDEKNKLDRKVALELYSKGSAWFSGDEGKKGTLAVGQFADIAVLSADYFTVPEEEIKDLESLL
TIMGGQVVYGNDEFKNLSPELPPASPDWSPTGVYGYGGANLAHTILSHDSHDNKLHSCSNPLHQHTHTVIGKDGTKWGIG
CTCFAF

Specific function: Unknown

COG id: COG1574

COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 54339; Mature: 54208

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTLEEINAVSEDTPVFVLHLYDRALVNRAGLRALGYTKDTPDPPGCLIERDKRGNPTGL
CCCHHHHHCCCCCCCEEEEEEHHHHHHHHHCCCEECCCCCCCCCCCCEEECCCCCCCCEE
LIANPNASILYSSLGKAPILNFDDQINSTRHFMRELNRLGITSAIDAGGGFQNYPDDYRV
EEECCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCHHHHH
VEHLAEKEQLTLRIAYNLFTQNPNHEYEDFASWAKIVSPGQGNDKYKMNGAGEMLVFSAA
HHHHHHHHHEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEECC
DFEKFQMPRPELATMMEADLKKVISLLVENRWPFRLHATYDESITRFLNVFEEVNKEIPF
CHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCC
NGLRWWFDHAETISDRSMERVKALNGGIAIQDRMAFQGEYFVDLYGKEAAKRTPPIYRML
CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEECCCEEEEECCCHHHHCCCCHHHHH
DLGIPVGAGSDATRVSSYNPWVALYWMVAGKTIGGLSIYDEKNKLDRKVALELYSKGSAW
HCCCCCCCCCCCCCCCCCCCCEEEEEEHHCCCCCCEEEECCHHHHHHHHHHHHHHCCCCE
FSGDEGKKGTLAVGQFADIAVLSADYFTVPEEEIKDLESLLTIMGGQVVYGNDEFKNLSP
ECCCCCCCCCEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEECCCHHCCCCC
ELPPASPDWSPTGVYGYGGANLAHTILSHDSHDNKLHSCSNPLHQHTHTVIGKDGTKWGI
CCCCCCCCCCCCCEEECCCHHHHHHHHHCCCCCCHHHHHCCHHHHHHHEEECCCCCCCCC
GCTCFAF
CEEEEEC
>Mature Secondary Structure 
PTLEEINAVSEDTPVFVLHLYDRALVNRAGLRALGYTKDTPDPPGCLIERDKRGNPTGL
CCHHHHHCCCCCCCEEEEEEHHHHHHHHHCCCEECCCCCCCCCCCCEEECCCCCCCCEE
LIANPNASILYSSLGKAPILNFDDQINSTRHFMRELNRLGITSAIDAGGGFQNYPDDYRV
EEECCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCHHHHH
VEHLAEKEQLTLRIAYNLFTQNPNHEYEDFASWAKIVSPGQGNDKYKMNGAGEMLVFSAA
HHHHHHHHHEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEECC
DFEKFQMPRPELATMMEADLKKVISLLVENRWPFRLHATYDESITRFLNVFEEVNKEIPF
CHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCC
NGLRWWFDHAETISDRSMERVKALNGGIAIQDRMAFQGEYFVDLYGKEAAKRTPPIYRML
CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEECCCEEEEECCCHHHHCCCCHHHHH
DLGIPVGAGSDATRVSSYNPWVALYWMVAGKTIGGLSIYDEKNKLDRKVALELYSKGSAW
HCCCCCCCCCCCCCCCCCCCCEEEEEEHHCCCCCCEEEECCHHHHHHHHHHHHHHCCCCE
FSGDEGKKGTLAVGQFADIAVLSADYFTVPEEEIKDLESLLTIMGGQVVYGNDEFKNLSP
ECCCCCCCCCEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEECCCHHCCCCC
ELPPASPDWSPTGVYGYGGANLAHTILSHDSHDNKLHSCSNPLHQHTHTVIGKDGTKWGI
CCCCCCCCCCCCCEEECCCHHHHHHHHHCCCCCCHHHHHCCHHHHHHHEEECCCCCCCCC
GCTCFAF
CEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]