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The map label for this gene is ntdA [H]

Identifier: 227813933

GI number: 227813933

Start: 1219629

End: 1220030

Strand: Direct

Name: ntdA [H]

Synonym: BAMEG_1339

Alternate gene names: 227813933

Gene position: 1219629-1220030 (Clockwise)

Preceding gene: 227813932

Following gene: 227813934

Centisome position: 23.32

GC content: 28.86

Gene sequence:

>402_bases
TTGGAAAGAATTAAGTATTTATCATACAACAATTTAAAAAGAGCGTATTTAGCTCAACGATATATTCGTGAGTTAAAGGA
TTTAGAGGATAGAGAATTAATAAAGCTACCTATGATGACAGAAGATAATGTCTGGCACCTTTTTCCGATTAGAGTTGAAA
ATGGAAGAAGAGACGAGTTGAAAAATAAATTGTACCAATTGTATAACATTGAAACAGATATTTATTATCCGGTATTATCT
CATAAACAAAATACTAAGTGGTTAAAGGAAAATGATTTGCAAAACAATATGTTCAATACAGAGCAAGTTCATAAAGAAAT
ATTACATCTACCTTTACATCCAAATATGATGTTAGAAGAGCAAAATTTCGTTTTGGAGGGATTATTCAATGTCAATAAGT
AA

Upstream 100 bases:

>100_bases
ATCAATATAGTTATCATGGATTTGAAATTGATAAAAAAATAAAAAGGTATTAGACTTTGGATTCAATTCTAAAATTGATA
ATTTGCAAGCAGCTATTGGT

Downstream 100 bases:

>100_bases
TGAAGTTTTGAAGTCTTTAAATTTTGAAAGACTACCACAGGTTAAAAACCCGAAATATGTAGTGTTCTGTGATTTTGATG
AAACTTATTATCCTCATAGC

Product: degT/dnrJ/eryC1/strS family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MERIKYLSYNNLKRAYLAQRYIRELKDLEDRELIKLPMMTEDNVWHLFPIRVENGRRDELKNKLYQLYNIETDIYYPVLS
HKQNTKWLKENDLQNNMFNTEQVHKEILHLPLHPNMMLEEQNFVLEGLFNVNK

Sequences:

>Translated_133_residues
MERIKYLSYNNLKRAYLAQRYIRELKDLEDRELIKLPMMTEDNVWHLFPIRVENGRRDELKNKLYQLYNIETDIYYPVLS
HKQNTKWLKENDLQNNMFNTEQVHKEILHLPLHPNMMLEEQNFVLEGLFNVNK
>Mature_133_residues
MERIKYLSYNNLKRAYLAQRYIRELKDLEDRELIKLPMMTEDNVWHLFPIRVENGRRDELKNKLYQLYNIETDIYYPVLS
HKQNTKWLKENDLQNNMFNTEQVHKEILHLPLHPNMMLEEQNFVLEGLFNVNK

Specific function: Part of the ntdABC operon that biosynthesizes the NTD (3,3'-neotrehalosadiamine) antibiotic [H]

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 16366; Mature: 16366

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERIKYLSYNNLKRAYLAQRYIRELKDLEDRELIKLPMMTEDNVWHLFPIRVENGRRDEL
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEEEEEECCCCHHHH
KNKLYQLYNIETDIYYPVLSHKQNTKWLKENDLQNNMFNTEQVHKEILHLPLHPNMMLEE
HHHHHHHHCCCCCEEEHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECC
QNFVLEGLFNVNK
CCHHHHHHHCCCC
>Mature Secondary Structure
MERIKYLSYNNLKRAYLAQRYIRELKDLEDRELIKLPMMTEDNVWHLFPIRVENGRRDEL
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEEEEEECCCCHHHH
KNKLYQLYNIETDIYYPVLSHKQNTKWLKENDLQNNMFNTEQVHKEILHLPLHPNMMLEE
HHHHHHHHCCCCCEEEHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECC
QNFVLEGLFNVNK
CCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]