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The map label for this gene is tsr [C]

Identifier: 227813923

GI number: 227813923

Start: 1209728

End: 1210912

Strand: Direct

Name: tsr [C]

Synonym: BAMEG_1329

Alternate gene names: 227813923

Gene position: 1209728-1210912 (Clockwise)

Preceding gene: 227813922

Following gene: 227813927

Centisome position: 23.13

GC content: 35.11

Gene sequence:

>1185_bases
ATGCCTATTAAAGAAATTGAAGAAGCTACCAATCCTATTTTTTATAAAACGCTCACTATAATAGGGGCTTCATTGTTGTT
AGGTGGAATTGTAATTTTCTTCATTCTTAAATCTATTATTAATCCATTAAGACAATTAGTTATTTCAGCTCAAAGAATTA
GTCGTGGAGATTTAACTGAGAAAATAAATATTCGTTCAAAGGATGAACTTGGTCAATTAGGTGGTAGTTTCAATACAATG
GCAGAGTCTTTACGTAATATAATTTCTCAAATTAACACATCTGCAGGACATGTGGCTGCTTCATCTGAGGAACTAACCGC
TAGCGTAGAGCAAGCCAGTGTTGCGACAGAACAAATTACAAAAGAAATGGAAGAAATATCGAATAGTGCAGAAGTTCAAA
ATAATGAAGTGGCGTCTGGAGCGAAATTAATTGGTGAGGTAACACGAAACATTCAATGCGTAGCTGATAATGCTTCTGAA
GTATCGGCTTCATCCTTATACACAAAACAAAAAGCCAATGAGGGTGAACAATTAGTAGAACAAACTGTAACGCAAATGCA
GTCAATCCATCATTCTGTTTCTCAATCTGATAATGTAATTAAATTATTAGATAAGAAATCGCAGCAAATCGGAAGTATAT
TAGAAGTAATTCAAAATATTGCAGCACAAACAAATTTATTAGCATTGAATGCAGCGATTGAAGCGGCAAGGGCAGGAGAA
CAGGGGCGTGGCTTTGCAATTGTCGCCGATGAAGTCAGGAAGTTAGCGGAGCAATCATCCGAATCTTCAATGGAAATTGG
AAGTTTAATTAATGAAATACAAGCAGATGTACATGAGACTGTAAAAGCTATGAATGAAGTAGGAGTTGAAGTGCAGTCAG
GGATTCAGGTTGCGAATGATACAAAACAAAGTTTTTATGAAATTTCAAAATCTGCAAATGATATCGTGTCAAAAGTACAT
GGTATGGTGGAATTATCAAATAAAATGACAAGTGATGTAATGGAAGTTGATACATCAATTAATCAAATATCTATGGCTGT
GAAAGAGAATTCTTCAAGTATGCAAACGATAGCCGGTTCATCTGAAGAACAACATGCTTCTATGGAAGAGATAAATTCTT
CAGCAATACAATTAGCACAGACGGCCGAAGAACTTCAAGAATTAATTGGTGGATTTAAGATATAA

Upstream 100 bases:

>100_bases
AAGAAAGAAGATGGAGTAATTACTTATAGCCTTAATGGTGAGGATCGAAACATAAGCTTTAAAACAAACAAAAAAAACAG
GTTGGAAAATAGCTGGTGTA

Downstream 100 bases:

>100_bases
GTTCAGAATCTAGGATAGAATCCTAGATAGTGTGTTTAAGGATAGAAGTTAAAAATCTTATAATGATAAAAGGAGCAAAT
TAATTTGCTCCTTTTTCACT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 393

Protein sequence:

>394_residues
MPIKEIEEATNPIFYKTLTIIGASLLLGGIVIFFILKSIINPLRQLVISAQRISRGDLTEKINIRSKDELGQLGGSFNTM
AESLRNIISQINTSAGHVAASSEELTASVEQASVATEQITKEMEEISNSAEVQNNEVASGAKLIGEVTRNIQCVADNASE
VSASSLYTKQKANEGEQLVEQTVTQMQSIHHSVSQSDNVIKLLDKKSQQIGSILEVIQNIAAQTNLLALNAAIEAARAGE
QGRGFAIVADEVRKLAEQSSESSMEIGSLINEIQADVHETVKAMNEVGVEVQSGIQVANDTKQSFYEISKSANDIVSKVH
GMVELSNKMTSDVMEVDTSINQISMAVKENSSSMQTIAGSSEEQHASMEEINSSAIQLAQTAEELQELIGGFKI

Sequences:

>Translated_394_residues
MPIKEIEEATNPIFYKTLTIIGASLLLGGIVIFFILKSIINPLRQLVISAQRISRGDLTEKINIRSKDELGQLGGSFNTM
AESLRNIISQINTSAGHVAASSEELTASVEQASVATEQITKEMEEISNSAEVQNNEVASGAKLIGEVTRNIQCVADNASE
VSASSLYTKQKANEGEQLVEQTVTQMQSIHHSVSQSDNVIKLLDKKSQQIGSILEVIQNIAAQTNLLALNAAIEAARAGE
QGRGFAIVADEVRKLAEQSSESSMEIGSLINEIQADVHETVKAMNEVGVEVQSGIQVANDTKQSFYEISKSANDIVSKVH
GMVELSNKMTSDVMEVDTSINQISMAVKENSSSMQTIAGSSEEQHASMEEINSSAIQLAQTAEELQELIGGFKI
>Mature_393_residues
PIKEIEEATNPIFYKTLTIIGASLLLGGIVIFFILKSIINPLRQLVISAQRISRGDLTEKINIRSKDELGQLGGSFNTMA
ESLRNIISQINTSAGHVAASSEELTASVEQASVATEQITKEMEEISNSAEVQNNEVASGAKLIGEVTRNIQCVADNASEV
SASSLYTKQKANEGEQLVEQTVTQMQSIHHSVSQSDNVIKLLDKKSQQIGSILEVIQNIAAQTNLLALNAAIEAARAGEQ
GRGFAIVADEVRKLAEQSSESSMEIGSLINEIQADVHETVKAMNEVGVEVQSGIQVANDTKQSFYEISKSANDIVSKVHG
MVELSNKMTSDVMEVDTSINQISMAVKENSSSMQTIAGSSEEQHASMEEINSSAIQLAQTAEELQELIGGFKI

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=273, Percent_Identity=34.0659340659341, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI1788195, Length=317, Percent_Identity=29.6529968454259, Blast_Score=118, Evalue=5e-28,
Organism=Escherichia coli, GI1787690, Length=393, Percent_Identity=29.2620865139949, Blast_Score=115, Evalue=4e-27,
Organism=Escherichia coli, GI1788194, Length=371, Percent_Identity=29.1105121293801, Blast_Score=109, Evalue=3e-25,
Organism=Escherichia coli, GI1789453, Length=321, Percent_Identity=27.1028037383178, Blast_Score=91, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 42411; Mature: 42280

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIKEIEEATNPIFYKTLTIIGASLLLGGIVIFFILKSIINPLRQLVISAQRISRGDLTE
CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
KINIRSKDELGQLGGSFNTMAESLRNIISQINTSAGHVAASSEELTASVEQASVATEQIT
HCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
KEMEEISNSAEVQNNEVASGAKLIGEVTRNIQCVADNASEVSASSLYTKQKANEGEQLVE
HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHCCHHHHHHH
QTVTQMQSIHHSVSQSDNVIKLLDKKSQQIGSILEVIQNIAAQTNLLALNAAIEAARAGE
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QGRGFAIVADEVRKLAEQSSESSMEIGSLINEIQADVHETVKAMNEVGVEVQSGIQVAND
CCCCEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHH
TKQSFYEISKSANDIVSKVHGMVELSNKMTSDVMEVDTSINQISMAVKENSSSMQTIAGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC
SEEQHASMEEINSSAIQLAQTAEELQELIGGFKI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PIKEIEEATNPIFYKTLTIIGASLLLGGIVIFFILKSIINPLRQLVISAQRISRGDLTE
CHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
KINIRSKDELGQLGGSFNTMAESLRNIISQINTSAGHVAASSEELTASVEQASVATEQIT
HCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
KEMEEISNSAEVQNNEVASGAKLIGEVTRNIQCVADNASEVSASSLYTKQKANEGEQLVE
HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHCCHHHHHHH
QTVTQMQSIHHSVSQSDNVIKLLDKKSQQIGSILEVIQNIAAQTNLLALNAAIEAARAGE
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QGRGFAIVADEVRKLAEQSSESSMEIGSLINEIQADVHETVKAMNEVGVEVQSGIQVAND
CCCCEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHH
TKQSFYEISKSANDIVSKVHGMVELSNKMTSDVMEVDTSINQISMAVKENSSSMQTIAGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC
SEEQHASMEEINSSAIQLAQTAEELQELIGGFKI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA