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The map label for this gene is yezC [H]

Identifier: 227813903

GI number: 227813903

Start: 1185097

End: 1185537

Strand: Direct

Name: yezC [H]

Synonym: BAMEG_1309

Alternate gene names: 227813903

Gene position: 1185097-1185537 (Clockwise)

Preceding gene: 227813901

Following gene: 227813904

Centisome position: 22.66

GC content: 34.01

Gene sequence:

>441_bases
ATGGATGATACAGATTTAAAGATTCTTTCTCATCTTCAGGAAAATGCACGTTTAAGTATGGTTGAAATAGGAAAACTGGT
AGGTTTGAGTTCTCCTTCTGTTACAGAGCGAGTTAGAAGACTAGAAGAACAAGAGGTAATTATAAGTTATCGCACGATTG
TTAATCCGAAAGAATTAAAAAAACATATTACTGCGTTTGTTTTGATGGAACCAAGGGATTGCAATAAATATAAAAAGTTT
GCAATGGAACATTCAGATGTGGTTGAATGTCACCGGATTGCCGGTATGTATAGTTATCTAACAAAGGTAGTCACGGAATC
TGTACATACACTCGAAGACTATATTAATTTGTGCTTAGAGTATGGAAAGCCTACAACCTTAATAGTGCTTTCTTCTCCAG
TAGAACATAAATCATTTTTTACAGAGAGTGAAAAACTTTAA

Upstream 100 bases:

>100_bases
AAAAAGATAACATGCTATAATTTATGTATTAATTATAATTTTCTTAAAGAATTTAAGAATTATTAAATGTTTTCTTAATT
AATCAAGGGGAGGCCAAGCA

Downstream 100 bases:

>100_bases
TTACATATGAGTGATTATTCAAAATAAAAAGCGTTAAATTAATACCTAATAGGAAATAGAGTCCTATTAGGTATTAATTT
TCAGAAAATTATTTAGAAAA

Product: transcriptional regulator, AsnC family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MDDTDLKILSHLQENARLSMVEIGKLVGLSSPSVTERVRRLEEQEVIISYRTIVNPKELKKHITAFVLMEPRDCNKYKKF
AMEHSDVVECHRIAGMYSYLTKVVTESVHTLEDYINLCLEYGKPTTLIVLSSPVEHKSFFTESEKL

Sequences:

>Translated_146_residues
MDDTDLKILSHLQENARLSMVEIGKLVGLSSPSVTERVRRLEEQEVIISYRTIVNPKELKKHITAFVLMEPRDCNKYKKF
AMEHSDVVECHRIAGMYSYLTKVVTESVHTLEDYINLCLEYGKPTTLIVLSSPVEHKSFFTESEKL
>Mature_146_residues
MDDTDLKILSHLQENARLSMVEIGKLVGLSSPSVTERVRRLEEQEVIISYRTIVNPKELKKHITAFVLMEPRDCNKYKKF
AMEHSDVVECHRIAGMYSYLTKVVTESVHTLEDYINLCLEYGKPTTLIVLSSPVEHKSFFTESEKL

Specific function: Mediates A Global Response To Leucine. Exogenous Leucine Affects The Expression Of A Number Of Different Operons; Lrp Mediates This Effect For At Least Some Of These Operons. For Example It Is Regulator Of The Branched-Chain Amino Acid Transport Genes. [

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=107, Percent_Identity=35.5140186915888, Blast_Score=67, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR000835
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg; PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 16833; Mature: 16833

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDTDLKILSHLQENARLSMVEIGKLVGLSSPSVTERVRRLEEQEVIISYRTIVNPKELK
CCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHH
KHITAFVLMEPRDCNKYKKFAMEHSDVVECHRIAGMYSYLTKVVTESVHTLEDYINLCLE
HHHHHHEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGKPTTLIVLSSPVEHKSFFTESEKL
CCCCEEEEEECCCCHHHHHHCCCCCC
>Mature Secondary Structure
MDDTDLKILSHLQENARLSMVEIGKLVGLSSPSVTERVRRLEEQEVIISYRTIVNPKELK
CCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHH
KHITAFVLMEPRDCNKYKKFAMEHSDVVECHRIAGMYSYLTKVVTESVHTLEDYINLCLE
HHHHHHEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGKPTTLIVLSSPVEHKSFFTESEKL
CCCCEEEEEECCCCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]