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The map label for this gene is gmuR [H]

Identifier: 227813767

GI number: 227813767

Start: 1057514

End: 1058005

Strand: Direct

Name: gmuR [H]

Synonym: BAMEG_1171

Alternate gene names: 227813767

Gene position: 1057514-1058005 (Clockwise)

Preceding gene: 227813766

Following gene: 227813769

Centisome position: 20.22

GC content: 38.62

Gene sequence:

>492_bases
ATGATTCAAACTTTAACAGGTACAAAAGCTGTTTATGGCAGCGAGGTAGAAAGTAAAATTATTGAGTTTACGATTGTCGG
TGCCGATGAAATTATTGCTGAAAAATTGGGCATTTCAGTAGGAGATTTTGTATATAAAATCATCCGCCTCCGCATCATTC
ACAGTATTCCAACGATTATGGAGCATACATGGATGCCGATTTCGGTCATTCCAGGTGTTGAAGTTTCTGTTTTAGAGGAA
TCAATCTACTCCCACATTCAAAATAAACTAGGCCTTCAAGTGGGAACATCCGTTGTTAGGGTAAAAGGAATTCGCCCGGA
TGATAAAGAAAAGCAGTTTATGAACTTAACAAATCAAGATTTCCTAATGAGAGTGGAACAGGTGGCCTACTTAACGGATG
GACGCACTTTTGAATACTCTTACGCCGATCACTTGCCGGAAACCTTTGAATTCGAAACAGTTATTACTGCAAAAAGTTAT
AAAGAGGCATAA

Upstream 100 bases:

>100_bases
TAAAAAAGCGCTGGATCTGTTAGTTAGAGACGGCTACATCATTCGCCGGCGCGGAAGTGGAACAGTCGTTCAAGATTGGC
GTCAGCAGGAAAAAGCACGA

Downstream 100 bases:

>100_bases
AAAATAGGTTGAGGCGCGTATTGCCTCAACCTATTTTTTGTCTTCAATATAGTAGAAACAGCTATTATTCATCGGCTGTA
ATAAGCATGGATGTGTGCCC

Product: transcriptional regulator, GntR family

Products: NA

Alternate protein names: Glucomannan utilization operon repressor; Glucomannan utilization protein R [H]

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MIQTLTGTKAVYGSEVESKIIEFTIVGADEIIAEKLGISVGDFVYKIIRLRIIHSIPTIMEHTWMPISVIPGVEVSVLEE
SIYSHIQNKLGLQVGTSVVRVKGIRPDDKEKQFMNLTNQDFLMRVEQVAYLTDGRTFEYSYADHLPETFEFETVITAKSY
KEA

Sequences:

>Translated_163_residues
MIQTLTGTKAVYGSEVESKIIEFTIVGADEIIAEKLGISVGDFVYKIIRLRIIHSIPTIMEHTWMPISVIPGVEVSVLEE
SIYSHIQNKLGLQVGTSVVRVKGIRPDDKEKQFMNLTNQDFLMRVEQVAYLTDGRTFEYSYADHLPETFEFETVITAKSY
KEA
>Mature_163_residues
MIQTLTGTKAVYGSEVESKIIEFTIVGADEIIAEKLGISVGDFVYKIIRLRIIHSIPTIMEHTWMPISVIPGVEVSVLEE
SIYSHIQNKLGLQVGTSVVRVKGIRPDDKEKQFMNLTNQDFLMRVEQVAYLTDGRTFEYSYADHLPETFEFETVITAKSY
KEA

Specific function: Transcriptional repressor of the gmuBACDREFG operon which is involved in the uptake and degradation of glucomannan [H]

COG id: COG2188

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786950, Length=147, Percent_Identity=25.1700680272109, Blast_Score=72, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000524
- InterPro:   IPR011663
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00392 GntR; PF07702 UTRA [H]

EC number: NA

Molecular weight: Translated: 18477; Mature: 18477

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQTLTGTKAVYGSEVESKIIEFTIVGADEIIAEKLGISVGDFVYKIIRLRIIHSIPTIM
CCCCCCCCCHHHCCHHHHHEEEEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
EHTWMPISVIPGVEVSVLEESIYSHIQNKLGLQVGTSVVRVKGIRPDDKEKQFMNLTNQD
HHCCCCEEECCCCHHHHHHHHHHHHHHHHHCHHHCCCEEEEECCCCCCHHHHHHCCCCHH
FLMRVEQVAYLTDGRTFEYSYADHLPETFEFETVITAKSYKEA
HHHHHHHHHHHCCCCEEEECHHHCCCCCCCCEEEEECCCCCCC
>Mature Secondary Structure
MIQTLTGTKAVYGSEVESKIIEFTIVGADEIIAEKLGISVGDFVYKIIRLRIIHSIPTIM
CCCCCCCCCHHHCCHHHHHEEEEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
EHTWMPISVIPGVEVSVLEESIYSHIQNKLGLQVGTSVVRVKGIRPDDKEKQFMNLTNQD
HHCCCCEEECCCCHHHHHHHHHHHHHHHHHCHHHCCCEEEEECCCCCCHHHHHHCCCCHH
FLMRVEQVAYLTDGRTFEYSYADHLPETFEFETVITAKSYKEA
HHHHHHHHHHHCCCCEEEECHHHCCCCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]