Click here to switch to the map view.

The map label for this gene is yegX [H]

Identifier: 227813723

GI number: 227813723

Start: 1020151

End: 1020888

Strand: Direct

Name: yegX [H]

Synonym: BAMEG_1127

Alternate gene names: 227813723

Gene position: 1020151-1020888 (Clockwise)

Preceding gene: 227813722

Following gene: 227813724

Centisome position: 19.51

GC content: 34.55

Gene sequence:

>738_bases
GTGAAAAAGAAGCTTTTTATAAGAGGAATCTTTATCTTAGTTAGTGTAATGAGTGTTGTCGCTTACTTAGTTTTTCAGGG
TATATTCATTCCGAATCAAATAAGTGCGGATAGGTATGAAATAAAAGGTGTAGATGTTGCGTCATATCAAGGGGATATAG
ATTGGAGAGAGTTGGAAAAGCAAAATATGAAGTTTGCGTTTATAAAGGCTACTGAAGGAAGCGCGTTTGTGGATAAGTAC
TTTTCTAAAAATTGGACGAATGCGAATAAAACAAGTATGCGCGTCGGAGCGTATCATTTTTTTAGTTTTGATAGTAAGGG
TGAAACACAAGCAGAGCAATTTATACGAAATGTTCCAAAATATAAACAAGCACTGCCACCCGTAATTGATGTTGAGTTTT
ACGCTAACAAAAAAGATAATCCGCCTAAGCGTGAAGATGTTACGAAAGAGTTGTCGGTCATGATTGAAATGCTAGAAAAA
CATTACGGTAAGAAAGTAATATTGTATGCAACTCAAGAGGCGTATGATTTATATATAAAGGATGCGTATCCTCAATGTGA
TATATGGATTCGTAGTGTTCTTACAAAACCGAGTTTATCTGATGAAAGAAAGTGGACGTTTTGGCAATACACGAACCGTG
GGAAACTAAGTGGTTATAATGGAAAAGAAAAGTATATTGATTTAAATGTATTTTATGGGAATGAGGAAGAGTTTGAGAAT
TATGGAATGAAAGATTAA

Upstream 100 bases:

>100_bases
TTAGAAATTGATTTGGAGAAAGCATTTGAAGAAAAAATGAGGATAAATAAAAAACGTGAATGGTAAGTGGAGTATTAATG
TGTAAAGATGGGGGATACTA

Downstream 100 bases:

>100_bases
GTTTTAAAGTGTACAACATTTTGTACACTTTTTTTGTTAAATACATAAAAAATAAGCAAGTAAAGATGGAACAAACATTT
GAGCTGAATTGTCTAATATA

Product: putative lysozyme

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MKKKLFIRGIFILVSVMSVVAYLVFQGIFIPNQISADRYEIKGVDVASYQGDIDWRELEKQNMKFAFIKATEGSAFVDKY
FSKNWTNANKTSMRVGAYHFFSFDSKGETQAEQFIRNVPKYKQALPPVIDVEFYANKKDNPPKREDVTKELSVMIEMLEK
HYGKKVILYATQEAYDLYIKDAYPQCDIWIRSVLTKPSLSDERKWTFWQYTNRGKLSGYNGKEKYIDLNVFYGNEEEFEN
YGMKD

Sequences:

>Translated_245_residues
MKKKLFIRGIFILVSVMSVVAYLVFQGIFIPNQISADRYEIKGVDVASYQGDIDWRELEKQNMKFAFIKATEGSAFVDKY
FSKNWTNANKTSMRVGAYHFFSFDSKGETQAEQFIRNVPKYKQALPPVIDVEFYANKKDNPPKREDVTKELSVMIEMLEK
HYGKKVILYATQEAYDLYIKDAYPQCDIWIRSVLTKPSLSDERKWTFWQYTNRGKLSGYNGKEKYIDLNVFYGNEEEFEN
YGMKD
>Mature_245_residues
MKKKLFIRGIFILVSVMSVVAYLVFQGIFIPNQISADRYEIKGVDVASYQGDIDWRELEKQNMKFAFIKATEGSAFVDKY
FSKNWTNANKTSMRVGAYHFFSFDSKGETQAEQFIRNVPKYKQALPPVIDVEFYANKKDNPPKREDVTKELSVMIEMLEK
HYGKKVILYATQEAYDLYIKDAYPQCDIWIRSVLTKPSLSDERKWTFWQYTNRGKLSGYNGKEKYIDLNVFYGNEEEFEN
YGMKD

Specific function: Unknown

COG id: COG3757

COG function: function code M; Lyzozyme M1 (1,4-beta-N-acetylmuramidase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 25 family [H]

Homologues:

Organism=Escherichia coli, GI87082043, Length=246, Percent_Identity=32.1138211382114, Blast_Score=125, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002053
- InterPro:   IPR008270
- InterPro:   IPR017853
- InterPro:   IPR018077
- InterPro:   IPR013781 [H]

Pfam domain/function: PF01183 Glyco_hydro_25 [H]

EC number: NA

Molecular weight: Translated: 28778; Mature: 28778

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKLFIRGIFILVSVMSVVAYLVFQGIFIPNQISADRYEIKGVDVASYQGDIDWRELEK
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCEEEECCCCCCCHHHHHH
QNMKFAFIKATEGSAFVDKYFSKNWTNANKTSMRVGAYHFFSFDSKGETQAEQFIRNVPK
CCCEEEEEEECCCCHHHHHHHHCCCCCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHCCH
YKQALPPVIDVEFYANKKDNPPKREDVTKELSVMIEMLEKHYGKKVILYATQEAYDLYIK
HHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEE
DAYPQCDIWIRSVLTKPSLSDERKWTFWQYTNRGKLSGYNGKEKYIDLNVFYGNEEEFEN
CCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEECCHHHHHH
YGMKD
CCCCC
>Mature Secondary Structure
MKKKLFIRGIFILVSVMSVVAYLVFQGIFIPNQISADRYEIKGVDVASYQGDIDWRELEK
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCEEEECCCCCCCHHHHHH
QNMKFAFIKATEGSAFVDKYFSKNWTNANKTSMRVGAYHFFSFDSKGETQAEQFIRNVPK
CCCEEEEEEECCCCHHHHHHHHCCCCCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHCCH
YKQALPPVIDVEFYANKKDNPPKREDVTKELSVMIEMLEKHYGKKVILYATQEAYDLYIK
HHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEE
DAYPQCDIWIRSVLTKPSLSDERKWTFWQYTNRGKLSGYNGKEKYIDLNVFYGNEEEFEN
CCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEECCHHHHHH
YGMKD
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]