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The map label for this gene is smF [H]

Identifier: 227813258

GI number: 227813258

Start: 587166

End: 587831

Strand: Direct

Name: smF [H]

Synonym: BAMEG_0660

Alternate gene names: 227813258

Gene position: 587166-587831 (Clockwise)

Preceding gene: 227813257

Following gene: 227813259

Centisome position: 11.23

GC content: 31.68

Gene sequence:

>666_bases
ATGAAAAGAGAACGATTATTACATCTTCATTATTTGTTAGCAGACCATTGGAAGGCGATAGAGAGGCTATTACATGTCGA
TCCAGAATTGAAGGGAATATACACTTTTAATGCAAAACAAATGGAATGTTACACTGGAATATCCTCGAAAAAATCTTCAG
AATTAGTAAATTTTCTTCAAAGTTCAAATCTCCCGCAATATATATCTTATTTAAAGAAAAATCGAATTTTTTATATGACA
ATATGGGATAAAGATTATCCAAAATTATTACGTGAAATACAAGATCCGCCCTTCGTATTATATGGAAAAGGAGAGAAGGA
TTTTCTCAATAAAGCGAATAAATTAGCGGTTGTTGGAACGAGAGAACCAACTTTATATGGACATGAGAGTTTAAAATTTA
TTTTACATCCATTATTAGAAAAGGAATGGCTTATTGTCAGTGGATTTGCAAGAGGGATAGATACGATGTCTCATGAAATT
ACAGTAAGACGGTATTGTCCAACAATTGCGATACTAGGACATGGATTATCGTATATATATCCAAAAGAGAATCGATATTT
ATATGAAGCGTGGAATGAATATATATTGTTATTAACAGAGTATCCTCCGCACTATGCACCAAAAAATGGTATTTTCCAAA
AAGGAATCGAATTATTAGTGGTATAA

Upstream 100 bases:

>100_bases
TAAAAACTACTAATCTGTTGAAAGACACCTTCTTGCTTGAAGGTGTCTTTTTACAAACTTCCTGTTTACATAATAAAAAT
TATGGGTAAGGAGAATTGAG

Downstream 100 bases:

>100_bases
GTAAAGGTGTTTTAGTTGTAGAAGCGAAATCGAGAAGCGGAACACTTATTACTGCAGACCTTGCTCTAGAGCAAAATAGA
GAGGTATTTGCACTTCCTGG

Product: DNA processing Smf protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MKRERLLHLHYLLADHWKAIERLLHVDPELKGIYTFNAKQMECYTGISSKKSSELVNFLQSSNLPQYISYLKKNRIFYMT
IWDKDYPKLLREIQDPPFVLYGKGEKDFLNKANKLAVVGTREPTLYGHESLKFILHPLLEKEWLIVSGFARGIDTMSHEI
TVRRYCPTIAILGHGLSYIYPKENRYLYEAWNEYILLLTEYPPHYAPKNGIFQKGIELLVV

Sequences:

>Translated_221_residues
MKRERLLHLHYLLADHWKAIERLLHVDPELKGIYTFNAKQMECYTGISSKKSSELVNFLQSSNLPQYISYLKKNRIFYMT
IWDKDYPKLLREIQDPPFVLYGKGEKDFLNKANKLAVVGTREPTLYGHESLKFILHPLLEKEWLIVSGFARGIDTMSHEI
TVRRYCPTIAILGHGLSYIYPKENRYLYEAWNEYILLLTEYPPHYAPKNGIFQKGIELLVV
>Mature_221_residues
MKRERLLHLHYLLADHWKAIERLLHVDPELKGIYTFNAKQMECYTGISSKKSSELVNFLQSSNLPQYISYLKKNRIFYMT
IWDKDYPKLLREIQDPPFVLYGKGEKDFLNKANKLAVVGTREPTLYGHESLKFILHPLLEKEWLIVSGFARGIDTMSHEI
TVRRYCPTIAILGHGLSYIYPKENRYLYEAWNEYILLLTEYPPHYAPKNGIFQKGIELLVV

Specific function: Unknown

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=164, Percent_Identity=28.0487804878049, Blast_Score=64, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 26027; Mature: 26027

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRERLLHLHYLLADHWKAIERLLHVDPELKGIYTFNAKQMECYTGISSKKSSELVNFLQ
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHH
SSNLPQYISYLKKNRIFYMTIWDKDYPKLLREIQDPPFVLYGKGEKDFLNKANKLAVVGT
HCCCHHHHHHHHHCCEEEEEEECCCHHHHHHHHCCCCEEEEECCCHHHHCCCCCEEEEEC
REPTLYGHESLKFILHPLLEKEWLIVSGFARGIDTMSHEITVRRYCPTIAILGHGLSYIY
CCCCEECHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHEEEHHHCCCCEEHHCCCEEEE
PKENRYLYEAWNEYILLLTEYPPHYAPKNGIFQKGIELLVV
ECCCCEEEEECCCEEEEEECCCCCCCCCCCHHHCCEEEEEC
>Mature Secondary Structure
MKRERLLHLHYLLADHWKAIERLLHVDPELKGIYTFNAKQMECYTGISSKKSSELVNFLQ
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHH
SSNLPQYISYLKKNRIFYMTIWDKDYPKLLREIQDPPFVLYGKGEKDFLNKANKLAVVGT
HCCCHHHHHHHHHCCEEEEEEECCCHHHHHHHHCCCCEEEEECCCHHHHCCCCCEEEEEC
REPTLYGHESLKFILHPLLEKEWLIVSGFARGIDTMSHEITVRRYCPTIAILGHGLSYIY
CCCCEECHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHEEEHHHCCCCEEHHCCCEEEE
PKENRYLYEAWNEYILLLTEYPPHYAPKNGIFQKGIELLVV
ECCCCEEEEECCCEEEEEECCCCCCCCCCCHHHCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]