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The map label for this gene is spoIIGA

Identifier: 227813185

GI number: 227813185

Start: 515405

End: 516214

Strand: Direct

Name: spoIIGA

Synonym: BAMEG_0583

Alternate gene names: NA

Gene position: 515405-516214 (Clockwise)

Preceding gene: 227813184

Following gene: 227813186

Centisome position: 9.85

GC content: 33.7

Gene sequence:

>810_bases
GTGTTAGGGGCATTTATAGGTTCAACCATTGTTATTTTTGCCTTTACTCCTTTTGCTTCTATGATGACACATCCGATTAT
GAAACTACTGTACTCGTTACTTATCGTGTATACAGCATTTGGGTTTACAACATTTAGAAATTATACACAAACTGTTTTTA
CTTTTTACTTTGTAACCTTTATGGTTGGCGGAGGATTAATGGGCACTCATTTCTTTTTGCAAACGAATGAAATGGTAAAT
GGGTTGGTTCAATCTCAATCAATTTCTTACGGTGACCCAATTAGTTGGTTGTTCGTTATTTTTGGTTTTCCAGTCATTTA
TTATTTTTCTAAAAAGCGTATTGAAAGCGTAGAGGTTACAAAAATACACTATGATCAAATTGTGAAATTGAAAATTCAAT
TAGCTGAAGAGGAGCTAGAACTCGCAGGTTTAATTGATAGTGGGAATCAACTTTACGACCCGTTAACGAAAACACCTGTT
ATGATTATGCATATTTCATCATTAGAACATTGTTTGCCAGCTTGGTTAACAGAACAAATTTATTCCAAAACAGAGATTCC
TCAAATACCAGAAAATGATTCTGGGTGGGCGACAAAATTACGCTTAATTCCTTTTCGAGCAGTAGGAGTAGAGAATCAAT
TTTTATGGGCAATTAAGCCAGAAAGTGTACAAATTTATCATGAAGGTAGTTCTATTGTCGTGAATAAAGTATTGATTGGA
TTAAATACACAACAGTTGTCAACCAATGGAGAGTATCAATGTATTGTGCATCCAAAAATGTTGATTTCGCAAAAAATGGT
AATTGCTTAA

Upstream 100 bases:

>100_bases
TTACGCCGACGTTGTTTGGTTGTTAAACGCCTGCATTGATTTTCTTTTACTTTTATTAACAGCTACCGTGTTAAAAAAGA
AGATCAAAAGATGGAGGCTT

Downstream 100 bases:

>100_bases
TAATGGGAGGCGGGATAATATGATGAAATTAAAATTTTATTTAGTATACCTTTGGTATAAAGTATTGTTGAAATTAGGAA
TTAAGACCGATGAAATTTAT

Product: sporulation sigma-E factor processing peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MLGAFIGSTIVIFAFTPFASMMTHPIMKLLYSLLIVYTAFGFTTFRNYTQTVFTFYFVTFMVGGGLMGTHFFLQTNEMVN
GLVQSQSISYGDPISWLFVIFGFPVIYYFSKKRIESVEVTKIHYDQIVKLKIQLAEEELELAGLIDSGNQLYDPLTKTPV
MIMHISSLEHCLPAWLTEQIYSKTEIPQIPENDSGWATKLRLIPFRAVGVENQFLWAIKPESVQIYHEGSSIVVNKVLIG
LNTQQLSTNGEYQCIVHPKMLISQKMVIA

Sequences:

>Translated_269_residues
MLGAFIGSTIVIFAFTPFASMMTHPIMKLLYSLLIVYTAFGFTTFRNYTQTVFTFYFVTFMVGGGLMGTHFFLQTNEMVN
GLVQSQSISYGDPISWLFVIFGFPVIYYFSKKRIESVEVTKIHYDQIVKLKIQLAEEELELAGLIDSGNQLYDPLTKTPV
MIMHISSLEHCLPAWLTEQIYSKTEIPQIPENDSGWATKLRLIPFRAVGVENQFLWAIKPESVQIYHEGSSIVVNKVLIG
LNTQQLSTNGEYQCIVHPKMLISQKMVIA
>Mature_269_residues
MLGAFIGSTIVIFAFTPFASMMTHPIMKLLYSLLIVYTAFGFTTFRNYTQTVFTFYFVTFMVGGGLMGTHFFLQTNEMVN
GLVQSQSISYGDPISWLFVIFGFPVIYYFSKKRIESVEVTKIHYDQIVKLKIQLAEEELELAGLIDSGNQLYDPLTKTPV
MIMHISSLEHCLPAWLTEQIYSKTEIPQIPENDSGWATKLRLIPFRAVGVENQFLWAIKPESVQIYHEGSSIVVNKVLIG
LNTQQLSTNGEYQCIVHPKMLISQKMVIA

Specific function: Probably activates the RNA polymerase sigma-35 factor at the stage II of sporulation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005081 [H]

Pfam domain/function: PF03419 Peptidase_U4 [H]

EC number: NA

Molecular weight: Translated: 30552; Mature: 30552

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGAFIGSTIVIFAFTPFASMMTHPIMKLLYSLLIVYTAFGFTTFRNYTQTVFTFYFVTF
CCCHHHHCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVGGGLMGTHFFLQTNEMVNGLVQSQSISYGDPISWLFVIFGFPVIYYFSKKRIESVEVT
HHCCCHHHHEEEEECHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEE
KIHYDQIVKLKIQLAEEELELAGLIDSGNQLYDPLTKTPVMIMHISSLEHCLPAWLTEQI
EEEHHHEEEEEEEEHHHHHHHHEEECCCCHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHH
YSKTEIPQIPENDSGWATKLRLIPFRAVGVENQFLWAIKPESVQIYHEGSSIVVNKVLIG
HHHCCCCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCEEEEECCCEEEEEHEEEE
LNTQQLSTNGEYQCIVHPKMLISQKMVIA
CCHHHCCCCCCEEEEECHHHHHCCCHHCC
>Mature Secondary Structure
MLGAFIGSTIVIFAFTPFASMMTHPIMKLLYSLLIVYTAFGFTTFRNYTQTVFTFYFVTF
CCCHHHHCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVGGGLMGTHFFLQTNEMVNGLVQSQSISYGDPISWLFVIFGFPVIYYFSKKRIESVEVT
HHCCCHHHHEEEEECHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEE
KIHYDQIVKLKIQLAEEELELAGLIDSGNQLYDPLTKTPVMIMHISSLEHCLPAWLTEQI
EEEHHHEEEEEEEEHHHHHHHHEEECCCCHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHH
YSKTEIPQIPENDSGWATKLRLIPFRAVGVENQFLWAIKPESVQIYHEGSSIVVNKVLIG
HHHCCCCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCEEEEECCCEEEEEHEEEE
LNTQQLSTNGEYQCIVHPKMLISQKMVIA
CCHHHCCCCCCEEEEECHHHHHCCCHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1904859 [H]