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The map label for this gene is clpP [H]

Identifier: 227813139

GI number: 227813139

Start: 470549

End: 471271

Strand: Direct

Name: clpP [H]

Synonym: BAMEG_0537

Alternate gene names: 227813139

Gene position: 470549-471271 (Clockwise)

Preceding gene: 227813138

Following gene: 227813140

Centisome position: 9.0

GC content: 35.68

Gene sequence:

>723_bases
ATGAAAGCATCCGCCAACGGTAAAACGGCTGATGTTTTTATTTATGGAGAAATTACAAAGTATGCATGGGAAGAGTATGG
AGAAGTATCTTCTATTACGTTCAAAAATGAACTTGATGAACTAGGTGACGATATTAAAACGATTAACCTTTACATCAATA
GTCCAGGTGGATCTGTCTTTGAAACGATGGCTATTATTGCAATGTTACAAAGGCATCATGCGAAGATTATCTCTTATATT
GATGGAATAGGCGCTTCATGTGCGTCAGTATTACCAATGATTTCAGACAAAATTATTATGTATGCTAATTCAATGATGAT
GATTCACAATGCATGGACATATGCATCAGGAAATGCCGATCAGCTACGTAAAGCAGCGGATGATATTGAACGTATTAACC
AATCGATGGTACAACACTATCTAACCCGTGCTGGTGACAAGTTAGATGAAGATACATTAAAACAATTACTAGATGCAGAG
ACATGGTTATCAGCTGAAGAAGCAATGGGGTATGGACTTTGTGATGAAATTATTCCAGCAAATAATGCAACAGCATGTCT
AGATGAAAAGTGGATGAAGGAATATAAAAATATTCCACAACAATTAGTTAATGCACAAGCTAACATATCATCAAACGAAA
TGTTAGAACGACAAAAAATTGCCGAAGAAGCGAAAGCTAACGCGGACTATATAAAAACAATTTTAGGACGAATTCATTCA
TGA

Upstream 100 bases:

>100_bases
TTGTGGATTTCTGGTGATTTATACCCAATTGATATGGACCCATCTCAACGAAAGGGGGTGAAAAGTAGTGGGAAAGAACA
AACAGAATAAGTTTTTTCAA

Downstream 100 bases:

>100_bases
AAATGAAAAATAAATTTCGATTATCTCTTGGTAACTTTCAATACTTTTCAAAAAATACATTATTTGAATTAAAACAAAAT
TTATCTACTATTGGTCAACA

Product: prophage LambdaBa02, Clp protease family protein

Products: NA

Alternate protein names: Endopeptidase Clp [H]

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MKASANGKTADVFIYGEITKYAWEEYGEVSSITFKNELDELGDDIKTINLYINSPGGSVFETMAIIAMLQRHHAKIISYI
DGIGASCASVLPMISDKIIMYANSMMMIHNAWTYASGNADQLRKAADDIERINQSMVQHYLTRAGDKLDEDTLKQLLDAE
TWLSAEEAMGYGLCDEIIPANNATACLDEKWMKEYKNIPQQLVNAQANISSNEMLERQKIAEEAKANADYIKTILGRIHS

Sequences:

>Translated_240_residues
MKASANGKTADVFIYGEITKYAWEEYGEVSSITFKNELDELGDDIKTINLYINSPGGSVFETMAIIAMLQRHHAKIISYI
DGIGASCASVLPMISDKIIMYANSMMMIHNAWTYASGNADQLRKAADDIERINQSMVQHYLTRAGDKLDEDTLKQLLDAE
TWLSAEEAMGYGLCDEIIPANNATACLDEKWMKEYKNIPQQLVNAQANISSNEMLERQKIAEEAKANADYIKTILGRIHS
>Mature_240_residues
MKASANGKTADVFIYGEITKYAWEEYGEVSSITFKNELDELGDDIKTINLYINSPGGSVFETMAIIAMLQRHHAKIISYI
DGIGASCASVLPMISDKIIMYANSMMMIHNAWTYASGNADQLRKAADDIERINQSMVQHYLTRAGDKLDEDTLKQLLDAE
TWLSAEEAMGYGLCDEIIPANNATACLDEKWMKEYKNIPQQLVNAQANISSNEMLERQKIAEEAKANADYIKTILGRIHS

Specific function: Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins [H]

COG id: COG0740

COG function: function code OU; Protease subunit of ATP-dependent Clp proteases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S14 family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17538017, Length=134, Percent_Identity=32.8358208955224, Blast_Score=70, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001907
- InterPro:   IPR018215 [H]

Pfam domain/function: PF00574 CLP_protease [H]

EC number: =3.4.21.92 [H]

Molecular weight: Translated: 26803; Mature: 26803

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKASANGKTADVFIYGEITKYAWEEYGEVSSITFKNELDELGDDIKTINLYINSPGGSVF
CCCCCCCCEEEEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCHHH
ETMAIIAMLQRHHAKIISYIDGIGASCASVLPMISDKIIMYANSMMMIHNAWTYASGNAD
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHH
QLRKAADDIERINQSMVQHYLTRAGDKLDEDTLKQLLDAETWLSAEEAMGYGLCDEIIPA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHCCCCCHHHHCCC
NNATACLDEKWMKEYKNIPQQLVNAQANISSNEMLERQKIAEEAKANADYIKTILGRIHS
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKASANGKTADVFIYGEITKYAWEEYGEVSSITFKNELDELGDDIKTINLYINSPGGSVF
CCCCCCCCEEEEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCHHH
ETMAIIAMLQRHHAKIISYIDGIGASCASVLPMISDKIIMYANSMMMIHNAWTYASGNAD
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHH
QLRKAADDIERINQSMVQHYLTRAGDKLDEDTLKQLLDAETWLSAEEAMGYGLCDEIIPA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHCCCCCHHHHCCC
NNATACLDEKWMKEYKNIPQQLVNAQANISSNEMLERQKIAEEAKANADYIKTILGRIHS
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA