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The map label for this gene is yfkD [H]

Identifier: 227813093

GI number: 227813093

Start: 440533

End: 441330

Strand: Direct

Name: yfkD [H]

Synonym: BAMEG_0491

Alternate gene names: 227813093

Gene position: 440533-441330 (Clockwise)

Preceding gene: 227813092

Following gene: 227813095

Centisome position: 8.42

GC content: 35.46

Gene sequence:

>798_bases
GTGAAACGAGTATACAGCATATGTCTTTCAACTATGGTCTCGTTTATTCTATTATTTCCTAACATGAGTTTTGCAAAGAC
AACGGTAGAAACAAAAATGCCTTCATCTGTTTTAAATATTTCTAAAGACAATACGTTTCCAAACGATGCACAAGATTTAC
CGCGTTTGCAGCCGAGTAAGTTTGCTCAAGAACTATTGAAAACAGCAAATATTAAAATTGAAAACCCAGACTTAATTCGA
ATGTTTAATGAAACGACAATTTCGAATGCGCCGCTTGCGGTAGGGTACCGAGCGAAGATTTATTTAGGTCAATGGGCTTT
GCACTATGAATCGATTGATACATCGATTAATTGGGAATATAAACAAGTAAATCGCAATGTGTATGATAATCGAGGGGGAG
ATCGCCTATATCCGCTACGCTATAAGCAAGAAACGCAAAAGACGGTTGAAGGTGATTTAACAGCAGATATGAAAGATGCT
ACAGATGTGAAAAAAATGATGCTTCTCAAAGCACTTGAAAAAGTACAATTACCACTTTCATTTAAAACGACCATTGGTTA
TGGTACTGGACATGAGAGAGTGTATAATATTAGCCCGAGTCAACTCGGATATTTATACGCTTATACACCAGCGGTAAATG
AAAAAGGAAAAGTGACATTTGGAGAAGTATACCTTGTATTAAAGGGAAATCAAAAAAGGCTTGTTGTAAAAAATATTACC
TCTCAAGGAATTGGAGCTGCTATTCCAATTCATGATCATTTGTATTTTAAATTCATTTCTTCTTCTCACTCACAATAA

Upstream 100 bases:

>100_bases
TGGTTTTTATTTATTATGAAAAATAGGCATAACAATTGTGCCCAGAGAAAACAATAAACGAAGTAGTATATATACCTTTA
CGTAGGAAGGAGCCAGACAG

Downstream 100 bases:

>100_bases
CATGAAAAACGTCAGCTTATAAGCTGACGTTTTTTTATAATGTAATGTTTGCCGTTTTTGATAAGAAATCTTCTGTCGGA
TAGTAGCTGTTTTTTACAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MKRVYSICLSTMVSFILLFPNMSFAKTTVETKMPSSVLNISKDNTFPNDAQDLPRLQPSKFAQELLKTANIKIENPDLIR
MFNETTISNAPLAVGYRAKIYLGQWALHYESIDTSINWEYKQVNRNVYDNRGGDRLYPLRYKQETQKTVEGDLTADMKDA
TDVKKMMLLKALEKVQLPLSFKTTIGYGTGHERVYNISPSQLGYLYAYTPAVNEKGKVTFGEVYLVLKGNQKRLVVKNIT
SQGIGAAIPIHDHLYFKFISSSHSQ

Sequences:

>Translated_265_residues
MKRVYSICLSTMVSFILLFPNMSFAKTTVETKMPSSVLNISKDNTFPNDAQDLPRLQPSKFAQELLKTANIKIENPDLIR
MFNETTISNAPLAVGYRAKIYLGQWALHYESIDTSINWEYKQVNRNVYDNRGGDRLYPLRYKQETQKTVEGDLTADMKDA
TDVKKMMLLKALEKVQLPLSFKTTIGYGTGHERVYNISPSQLGYLYAYTPAVNEKGKVTFGEVYLVLKGNQKRLVVKNIT
SQGIGAAIPIHDHLYFKFISSSHSQ
>Mature_265_residues
MKRVYSICLSTMVSFILLFPNMSFAKTTVETKMPSSVLNISKDNTFPNDAQDLPRLQPSKFAQELLKTANIKIENPDLIR
MFNETTISNAPLAVGYRAKIYLGQWALHYESIDTSINWEYKQVNRNVYDNRGGDRLYPLRYKQETQKTVEGDLTADMKDA
TDVKKMMLLKALEKVQLPLSFKTTIGYGTGHERVYNISPSQLGYLYAYTPAVNEKGKVTFGEVYLVLKGNQKRLVVKNIT
SQGIGAAIPIHDHLYFKFISSSHSQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30109; Mature: 30109

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRVYSICLSTMVSFILLFPNMSFAKTTVETKMPSSVLNISKDNTFPNDAQDLPRLQPSK
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHCCCCCCCCCCCHHHCCCCCHHH
FAQELLKTANIKIENPDLIRMFNETTISNAPLAVGYRAKIYLGQWALHYESIDTSINWEY
HHHHHHHHCCCEECCCHHEEEECCCCCCCCCEEECEEEEEEEEEEEEEEECCCCCCCEEH
KQVNRNVYDNRGGDRLYPLRYKQETQKTVEGDLTADMKDATDVKKMMLLKALEKVQLPLS
HHHCCCCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEE
FKTTIGYGTGHERVYNISPSQLGYLYAYTPAVNEKGKVTFGEVYLVLKGNQKRLVVKNIT
EEEEECCCCCCCEEEECCHHHCCEEEEECCCCCCCCCEEEEEEEEEEECCCCEEEEEECC
SQGIGAAIPIHDHLYFKFISSSHSQ
CCCCCEEEEECHHHEEEEECCCCCC
>Mature Secondary Structure
MKRVYSICLSTMVSFILLFPNMSFAKTTVETKMPSSVLNISKDNTFPNDAQDLPRLQPSK
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHCCCCCCCCCCCHHHCCCCCHHH
FAQELLKTANIKIENPDLIRMFNETTISNAPLAVGYRAKIYLGQWALHYESIDTSINWEY
HHHHHHHHCCCEECCCHHEEEECCCCCCCCCEEECEEEEEEEEEEEEEEECCCCCCCEEH
KQVNRNVYDNRGGDRLYPLRYKQETQKTVEGDLTADMKDATDVKKMMLLKALEKVQLPLS
HHHCCCCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEE
FKTTIGYGTGHERVYNISPSQLGYLYAYTPAVNEKGKVTFGEVYLVLKGNQKRLVVKNIT
EEEEECCCCCCCEEEECCHHHCCEEEEECCCCCCCCCEEEEEEEEEEECCCCEEEEEECC
SQGIGAAIPIHDHLYFKFISSSHSQ
CCCCCEEEEECHHHEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377 [H]