| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is 227082439
Identifier: 227082439
GI number: 227082439
Start: 2401530
End: 2401625
Strand: Reverse
Name: 227082439
Synonym: VCM66_2238
Alternate gene names: NA
Gene position: 2401625-2401530 (Counterclockwise)
Preceding gene: 227082441
Following gene: 227082438
Centisome position: 83.03
GC content: 37.5
Gene sequence:
>96_bases ATGGGTCAAAATAAATCGGATGTAAAACAGAAGGATGACAAAAGTATGAACAGTAAGGTTGAACGCTGCATCAATCTGTA TGAGCAGTGCAGTTAA
Upstream 100 bases:
>100_bases TATGCGCAAATAATGACTTTTTATTCTTTTTTGAGCAAGCGGTTTTTTATATGACCGATAGAATCCTTGGTTTATTGCAG ACCCGTTTATTGCAAGCCCT
Downstream 100 bases:
>100_bases TGGTGCAAAGCCTCGCCCCAAGAGGCTGGATAAAGTGAGATAAGCGGTATGGCAAAAACGGAAAGCAAAAGTAAAGCCTT GAGTAAAGAGCGTTTACTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 31; Mature: 30
Protein sequence:
>31_residues MGQNKSDVKQKDDKSMNSKVERCINLYEQCS
Sequences:
>Translated_31_residues MGQNKSDVKQKDDKSMNSKVERCINLYEQCS >Mature_30_residues GQNKSDVKQKDDKSMNSKVERCINLYEQCS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3607; Mature: 3476
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.5 %Cys (Translated Protein) 6.5 %Met (Translated Protein) 12.9 %Cys+Met (Translated Protein) 6.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 10.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQNKSDVKQKDDKSMNSKVERCINLYEQCS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GQNKSDVKQKDDKSMNSKVERCINLYEQCS CCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA