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The map label for this gene is 227082365

Identifier: 227082365

GI number: 227082365

Start: 2331910

End: 2332233

Strand: Reverse

Name: 227082365

Synonym: VCM66_2164

Alternate gene names: NA

Gene position: 2332233-2331910 (Counterclockwise)

Preceding gene: 227082366

Following gene: 227082364

Centisome position: 80.63

GC content: 51.54

Gene sequence:

>324_bases
ATGGGGAAAGCAATGAACAAAATGGTTATAGCCCTCGCTTTGGGTGGCTGCGCTATGTCTGGTGCCGCTTTGGCGGGGGA
TGTGGCTGCAGGGCAAGCGAAAGCCGCGGTTTGCGCAGCGTGTCACGGCATGGATGGGATTGCCGTTATTCCCGGCTACC
CAAATCTTAAAGGGCAGAGTGAGCAATACTTGATTAGCTCCGTTAAAGCTTACAAAAATAAAGAGCGCACAGGTGGCTTG
GCTGCAGTGATGCAAGCGCAAGCCATGATGCTCAGTGATGAAGATATTGCTAATCTGGCTGCTTATTACGCCAGCTTGAA
GTGA

Upstream 100 bases:

>100_bases
GTGATTGGAGTGGGCAAGATTGTGAGTTGGTTTGGTTCAAATCTCATGATTCTGTGCCAAAATAAATTCATAACCACACA
TAATCTATAGGGATAATTAC

Downstream 100 bases:

>100_bases
TCATTATCCGCTTCGTACTTAAAGCGGCAGCGGTGTTGGCTAGGTTCGTTCATCTCTATCACATAGTGTGCCTATGCTCA
TGGAGATGAACCCACCTACT

Product: cytochrome c554

Products: NA

Alternate protein names: Cytochrome c554 [H]

Number of amino acids: Translated: 107; Mature: 106

Protein sequence:

>107_residues
MGKAMNKMVIALALGGCAMSGAALAGDVAAGQAKAAVCAACHGMDGIAVIPGYPNLKGQSEQYLISSVKAYKNKERTGGL
AAVMQAQAMMLSDEDIANLAAYYASLK

Sequences:

>Translated_107_residues
MGKAMNKMVIALALGGCAMSGAALAGDVAAGQAKAAVCAACHGMDGIAVIPGYPNLKGQSEQYLISSVKAYKNKERTGGL
AAVMQAQAMMLSDEDIANLAAYYASLK
>Mature_106_residues
GKAMNKMVIALALGGCAMSGAALAGDVAAGQAKAAVCAACHGMDGIAVIPGYPNLKGQSEQYLISSVKAYKNKERTGGLA
AVMQAQAMMLSDEDIANLAAYYASLK

Specific function: Unknown

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR008168 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 10844; Mature: 10713

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
7.5 %Met     (Translated Protein)
10.3 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
6.6 %Met     (Mature Protein)
9.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKAMNKMVIALALGGCAMSGAALAGDVAAGQAKAAVCAACHGMDGIAVIPGYPNLKGQS
CCCHHHHHHHHHHHCCHHHCCCHHCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCC
EQYLISSVKAYKNKERTGGLAAVMQAQAMMLSDEDIANLAAYYASLK
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
GKAMNKMVIALALGGCAMSGAALAGDVAAGQAKAAVCAACHGMDGIAVIPGYPNLKGQS
CCHHHHHHHHHHHCCHHHCCCHHCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCC
EQYLISSVKAYKNKERTGGLAAVMQAQAMMLSDEDIANLAAYYASLK
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2829828 [H]