| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is cheR-2
Identifier: 227082325
GI number: 227082325
Start: 2284233
End: 2285060
Strand: Reverse
Name: cheR-2
Synonym: VCM66_2124
Alternate gene names: 227082325
Gene position: 2285060-2284233 (Counterclockwise)
Preceding gene: 227082326
Following gene: 227082324
Centisome position: 79.0
GC content: 46.38
Gene sequence:
>828_bases ATGACTGCTATAACGATTAGCGACCAAGAGTATCGCGACTTTTGCCGATTTCTGGAATCTCAGTGCGGAATTGTACTGGG TGACAGCAAGCAGTATTTGGTGCGAAGTCGTCTAAGTCCACTCGTCACCAAATTCAAGTTAAGTTCGTTGTCTGACTTGT TGCGGGATGTCGTGACAGGACGAAATCGCGATCTGCGCGTAGCAGCGGTTGACGCCATGACAACCAACGAAACCTTATGG TTTCGAGATTCCTACCCATTTACGGTTTTAGCTGACAAATTATTGCCAGAAATGGCGGCAAATAAACGGCCGATAAAAAT CTGGTCGGCGGCCAGTTCATCAGGCCAAGAGCCGTACTCCATGGCGATGACGATTTTAGAAGTGCAGCAAAAACGTCCGG GATTGTTGCCAAGCGTGTCAATTACTGCCACGGATATTTCAGCCAGTATGTTAGATATGTGCCGAGCCGGGATTTATGAC AACTTAGCTTTAGGACGTGGTTTATCTCCTGAGCGTCGTCGAGTGTTTTTCGAAGATGCTGGGGATGGCCGGATGAAGGT GAAGGATAACGTAAAACGTTTAGTGAACTTCCGTCCGCAAAACTTAATGGAAAGTTACTCCTTGCTGGGTAAGTTTGACA TCATTTTTTGCCGTAACGTGCTGATCTATTTCTCGCCAGATATGAAATCTAAAGTGCTTAATCAGATGGCGGCAAGTTTG AACCCCGGCGGCTATTTACTGTTAGGGGCATCCGAATCCCTGACTGGGCTGACGGATAAGTTTGAAATGGTGCGTTGTAA CCCTGGTATCATCTATAAACTCAAATAA
Upstream 100 bases:
>100_bases ATGGTTGAGAGAGTTGGGGCAAATGCGTTTATTGCGAAATTTAACCCTGATGAGCTTGGTAATGCGGTGAAAGCTGCGCT AGTTAAATAAAGAGAATTGA
Downstream 100 bases:
>100_bases AGAAATTAATCCATCTCATTTTGCCCGGTTTCTACCGGGCTTTTTCTTTTCTTTCAGACTCTAATGAACAGGAACGCCTT TTTCTTGCAAGGAGTCGGTT
Product: chemotaxis protein methyltransferase CheR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MTAITISDQEYRDFCRFLESQCGIVLGDSKQYLVRSRLSPLVTKFKLSSLSDLLRDVVTGRNRDLRVAAVDAMTTNETLW FRDSYPFTVLADKLLPEMAANKRPIKIWSAASSSGQEPYSMAMTILEVQQKRPGLLPSVSITATDISASMLDMCRAGIYD NLALGRGLSPERRRVFFEDAGDGRMKVKDNVKRLVNFRPQNLMESYSLLGKFDIIFCRNVLIYFSPDMKSKVLNQMAASL NPGGYLLLGASESLTGLTDKFEMVRCNPGIIYKLK
Sequences:
>Translated_275_residues MTAITISDQEYRDFCRFLESQCGIVLGDSKQYLVRSRLSPLVTKFKLSSLSDLLRDVVTGRNRDLRVAAVDAMTTNETLW FRDSYPFTVLADKLLPEMAANKRPIKIWSAASSSGQEPYSMAMTILEVQQKRPGLLPSVSITATDISASMLDMCRAGIYD NLALGRGLSPERRRVFFEDAGDGRMKVKDNVKRLVNFRPQNLMESYSLLGKFDIIFCRNVLIYFSPDMKSKVLNQMAASL NPGGYLLLGASESLTGLTDKFEMVRCNPGIIYKLK >Mature_274_residues TAITISDQEYRDFCRFLESQCGIVLGDSKQYLVRSRLSPLVTKFKLSSLSDLLRDVVTGRNRDLRVAAVDAMTTNETLWF RDSYPFTVLADKLLPEMAANKRPIKIWSAASSSGQEPYSMAMTILEVQQKRPGLLPSVSITATDISASMLDMCRAGIYDN LALGRGLSPERRRVFFEDAGDGRMKVKDNVKRLVNFRPQNLMESYSLLGKFDIIFCRNVLIYFSPDMKSKVLNQMAASLN PGGYLLLGASESLTGLTDKFEMVRCNPGIIYKLK
Specific function: Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
COG id: COG1352
COG function: function code NT; Methylase of chemotaxis methyl-accepting proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheR-type methyltransferase domain
Homologues:
Organism=Escherichia coli, GI1788193, Length=266, Percent_Identity=32.3308270676692, Blast_Score=146, Evalue=1e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CHER1_VIBCH (Q9KQ06)
Other databases:
- EMBL: AE003852 - EMBL: AF139167 - PIR: H82106 - RefSeq: NP_231832.1 - ProteinModelPortal: Q9KQ06 - SMR: Q9KQ06 - GeneID: 2613241 - GenomeReviews: AE003852_GR - KEGG: vch:VC2201 - TIGR: VC_2201 - HOGENOM: HBG661948 - OMA: DIVYCRN - ProtClustDB: CLSK874707 - BRENDA: 2.1.1.80 - InterPro: IPR022642 - InterPro: IPR000780 - InterPro: IPR022641 - Gene3D: G3DSA:1.10.155.10 - PRINTS: PR00996 - SMART: SM00138
Pfam domain/function: PF01739 CheR; PF03705 CheR_N; SSF47757 CheR_mtfrase
EC number: =2.1.1.80
Molecular weight: Translated: 30871; Mature: 30740
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: PS50123 CHER
Important sites: BINDING 76-76 BINDING 78-78 BINDING 82-82 BINDING 117-117 BINDING 145-145
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAITISDQEYRDFCRFLESQCGIVLGDSKQYLVRSRLSPLVTKFKLSSLSDLLRDVVTG CEEEEECCHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RNRDLRVAAVDAMTTNETLWFRDSYPFTVLADKLLPEMAANKRPIKIWSAASSSGQEPYS CCCCEEEEEEEEEECCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHH MAMTILEVQQKRPGLLPSVSITATDISASMLDMCRAGIYDNLALGRGLSPERRRVFFEDA HHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHEEEEECC GDGRMKVKDNVKRLVNFRPQNLMESYSLLGKFDIIFCRNVLIYFSPDMKSKVLNQMAASL CCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEECCEEEEECCCHHHHHHHHHHHHC NPGGYLLLGASESLTGLTDKFEMVRCNPGIIYKLK CCCCEEEEECCCCCCCCCCCEEEEEECCCEEEEEC >Mature Secondary Structure TAITISDQEYRDFCRFLESQCGIVLGDSKQYLVRSRLSPLVTKFKLSSLSDLLRDVVTG EEEEECCHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RNRDLRVAAVDAMTTNETLWFRDSYPFTVLADKLLPEMAANKRPIKIWSAASSSGQEPYS CCCCEEEEEEEEEECCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHH MAMTILEVQQKRPGLLPSVSITATDISASMLDMCRAGIYDNLALGRGLSPERRRVFFEDA HHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHEEEEECC GDGRMKVKDNVKRLVNFRPQNLMESYSLLGKFDIIFCRNVLIYFSPDMKSKVLNQMAASL CCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEECCEEEEECCCHHHHHHHHHHHHC NPGGYLLLGASESLTGLTDKFEMVRCNPGIIYKLK CCCCEEEEECCCCCCCCCCCEEEEEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301; 10400589