| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is 227082298
Identifier: 227082298
GI number: 227082298
Start: 2255512
End: 2255625
Strand: Reverse
Name: 227082298
Synonym: VCM66_2096
Alternate gene names: NA
Gene position: 2255625-2255512 (Counterclockwise)
Preceding gene: 227082299
Following gene: 227082297
Centisome position: 77.98
GC content: 48.25
Gene sequence:
>114_bases TTGACTCGCAAAGTTGAATTGCGTTTACTGACAGGCGGTGTGCAAACACCGCCTTTTTTGTTTTGCCATACCCATATGGC CCGAGCTCTGCCCATCAGCAGTGTGAGTAAATGA
Upstream 100 bases:
>100_bases TGTGGATGCCGAAGTACTGAAAGATTACCTTGAGGCGAACAGTCCAATCGATGTGAACCGTTTCGCGCCAGCGGGCGAGA TTGTTTATCGTTAATAAGGT
Downstream 100 bases:
>100_bases GGACACGTGATTCATGACTCCTGCAATCAATCTTGCAAAGAAAAATAAAATCTCCCATACCATCCATCAGTATGAACATG ATCCGAGCCATGCCAGTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 37; Mature: 36
Protein sequence:
>37_residues MTRKVELRLLTGGVQTPPFLFCHTHMARALPISSVSK
Sequences:
>Translated_37_residues MTRKVELRLLTGGVQTPPFLFCHTHMARALPISSVSK >Mature_36_residues TRKVELRLLTGGVQTPPFLFCHTHMARALPISSVSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4124; Mature: 3993
Theoretical pI: Translated: 11.55; Mature: 11.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRKVELRLLTGGVQTPPFLFCHTHMARALPISSVSK CCCEEEEEEEECCCCCCCEEEEECCHHHCCCCCCCCC >Mature Secondary Structure TRKVELRLLTGGVQTPPFLFCHTHMARALPISSVSK CCEEEEEEEECCCCCCCEEEEECCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA