| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
Click here to switch to the map view.
The map label for this gene is 227082264
Identifier: 227082264
GI number: 227082264
Start: 2230443
End: 2230757
Strand: Reverse
Name: 227082264
Synonym: VCM66_2062
Alternate gene names: NA
Gene position: 2230757-2230443 (Counterclockwise)
Preceding gene: 227082265
Following gene: 227082263
Centisome position: 77.12
GC content: 41.9
Gene sequence:
>315_bases GTGGTTAATGTGGAAGCAGAACTGCAACGTTTGAGTGATCTCGATCAACAAATCGCAACTCTTCTTGCGGAAGATGACAT TCATACTGAAGATATTTTGCAGTTGGTCGATAACAGGGAACAGCTATTGCATAGCTTGTTAGGCTATTTGGCCGAGCACC CTGAATTGGCAAAGTCCGATTTATGGCTCAAGGCAATTGGTAATACTCAACAACTTGTGGAACAGATGCAGTTAAAAACG GCGGCGATGGGGCAAACACTCCACAAATATCGTCACGGAAATAAATCGGTTCAGCAATACAAAAAGTTTTTATAA
Upstream 100 bases:
>100_bases ATGGAGAGTTTGGAAAAACGGACCCATGCGAAATTCAGTGCCATGCAAGATGCGACCAGCAAGATGCAATCGCAGTTAGC GGGCATGATGAACGCTTTAG
Downstream 100 bases:
>100_bases GAGGAAGACTATGCGTGGTTCTTTACAGGCGTACAAAAAAGTATCAGTGGATAGCCAGCTAAGTGCGGCCTCACCGCATA AAATCGTCCAGATGTTAATG
Product: putative flagellar rod protein FlaI
Products: NA
Alternate protein names: Flagellar Rod Protein FlaI; FlaI Protein
Number of amino acids: Translated: 104; Mature: 104
Protein sequence:
>104_residues MVNVEAELQRLSDLDQQIATLLAEDDIHTEDILQLVDNREQLLHSLLGYLAEHPELAKSDLWLKAIGNTQQLVEQMQLKT AAMGQTLHKYRHGNKSVQQYKKFL
Sequences:
>Translated_104_residues MVNVEAELQRLSDLDQQIATLLAEDDIHTEDILQLVDNREQLLHSLLGYLAEHPELAKSDLWLKAIGNTQQLVEQMQLKT AAMGQTLHKYRHGNKSVQQYKKFL >Mature_104_residues MVNVEAELQRLSDLDQQIATLLAEDDIHTEDILQLVDNREQLLHSLLGYLAEHPELAKSDLWLKAIGNTQQLVEQMQLKT AAMGQTLHKYRHGNKSVQQYKKFL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11965; Mature: 11965
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNVEAELQRLSDLDQQIATLLAEDDIHTEDILQLVDNREQLLHSLLGYLAEHPELAKSD CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH LWLKAIGNTQQLVEQMQLKTAAMGQTLHKYRHGNKSVQQYKKFL HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC >Mature Secondary Structure MVNVEAELQRLSDLDQQIATLLAEDDIHTEDILQLVDNREQLLHSLLGYLAEHPELAKSD CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH LWLKAIGNTQQLVEQMQLKTAAMGQTLHKYRHGNKSVQQYKKFL HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA