Click here to switch to the map view.

The map label for this gene is 227082185

Identifier: 227082185

GI number: 227082185

Start: 2150678

End: 2151181

Strand: Reverse

Name: 227082185

Synonym: VCM66_1982

Alternate gene names: NA

Gene position: 2151181-2150678 (Counterclockwise)

Preceding gene: 227082186

Following gene: 227082184

Centisome position: 74.37

GC content: 47.42

Gene sequence:

>504_bases
ATGGGACGAAATGGCTCATATGTAATGGTTGATTTGATTTGGTTAACCCCTCCTGTAATCGCAGGAGGGTCGGTTTTTGT
TGTTTTGTGCATCATGCTGGCATTGTGGCGTCTTAAACGTGGTCAGCATCGTCAAAGTGAAACCTTGCGCCAACAAATTC
GCAATCTGGATCGTGAGCTGCAGAAATCCAACAAACAACTGCTTGAAGTGCGTTCGGTGATGGTCGGGCTCGGACAAAAA
GTCAGTGAGCAACAAGATATCATTCGCCATCTCAATGAGCGTTTACTTGAGCTGGAAAATACTGACGCGGATGCGCGTTT
GTACACTCGTGCCAGTAAGATGGTGCAACTTGGTGCCGATCTCAATGAACTGATCCAAGAGTGCGAGCTGCCCAAAGCCG
AAGCGGAATTGATGATGTCTTTGCAAAATAAACTGGCGGGTAAGGAATCGATTCCTCCGCTGGAAAGTCATCCCGAAGTT
CGAGCCAACAAAGCCAAATCATAG

Upstream 100 bases:

>100_bases
TGGGCACCGATGAAAGCTCGAAATTTATCCAAGGTGTGAGCAATCGTGATGGCAAACTACTGATTCTGGTGGATCTGAAC
AAGTTCCTGACCGATGAAGA

Downstream 100 bases:

>100_bases
TATGGCTTATTTCCTTGAAGCCTACTGGTAGCCAACATGACTACAGCTTCAATTAGGAAAAAGATATTCATTTGGATATG
GCTCATGACTGAATGAGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MGRNGSYVMVDLIWLTPPVIAGGSVFVVLCIMLALWRLKRGQHRQSETLRQQIRNLDRELQKSNKQLLEVRSVMVGLGQK
VSEQQDIIRHLNERLLELENTDADARLYTRASKMVQLGADLNELIQECELPKAEAELMMSLQNKLAGKESIPPLESHPEV
RANKAKS

Sequences:

>Translated_167_residues
MGRNGSYVMVDLIWLTPPVIAGGSVFVVLCIMLALWRLKRGQHRQSETLRQQIRNLDRELQKSNKQLLEVRSVMVGLGQK
VSEQQDIIRHLNERLLELENTDADARLYTRASKMVQLGADLNELIQECELPKAEAELMMSLQNKLAGKESIPPLESHPEV
RANKAKS
>Mature_166_residues
GRNGSYVMVDLIWLTPPVIAGGSVFVVLCIMLALWRLKRGQHRQSETLRQQIRNLDRELQKSNKQLLEVRSVMVGLGQKV
SEQQDIIRHLNERLLELENTDADARLYTRASKMVQLGADLNELIQECELPKAEAELMMSLQNKLAGKESIPPLESHPEVR
ANKAKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18954; Mature: 18823

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRNGSYVMVDLIWLTPPVIAGGSVFVVLCIMLALWRLKRGQHRQSETLRQQIRNLDREL
CCCCCCEEEEHHHHHCCCHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
QKSNKQLLEVRSVMVGLGQKVSEQQDIIRHLNERLLELENTDADARLYTRASKMVQLGAD
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
LNELIQECELPKAEAELMMSLQNKLAGKESIPPLESHPEVRANKAKS
HHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GRNGSYVMVDLIWLTPPVIAGGSVFVVLCIMLALWRLKRGQHRQSETLRQQIRNLDREL
CCCCCEEEEHHHHHCCCHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
QKSNKQLLEVRSVMVGLGQKVSEQQDIIRHLNERLLELENTDADARLYTRASKMVQLGAD
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
LNELIQECELPKAEAELMMSLQNKLAGKESIPPLESHPEVRANKAKS
HHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA