Click here to switch to the map view.

The map label for this gene is 227081937

Identifier: 227081937

GI number: 227081937

Start: 1888061

End: 1888906

Strand: Direct

Name: 227081937

Synonym: VCM66_1731

Alternate gene names: NA

Gene position: 1888061-1888906 (Clockwise)

Preceding gene: 227081936

Following gene: 227081939

Centisome position: 65.27

GC content: 29.2

Gene sequence:

>846_bases
GTGACAAACATTAACGAATTATTTAAATATTCATATTTAACAGATTGGATTGATAGTAACAACACGCGACAATGTTTATA
TTTATTGTCTAAAATTTACCTTGTCCATATGAGAGCAAGGGAAGTGATCGTTGATCATACTATTGATTCTGAAAGATTAA
AAAGTAAGTTAACAGCAACATTCAAACCAATGTATGACCCACCGATAGATTATGAAATTAATTTTAAACAAGATATAATA
TTAGCATTTGAACATTATCCCAGACATTCAATGCAAGAAACATTTATAACTAGCTCTCATGTTATCAACCCAAAGGAGAT
AGTTGATAAAAATGAAATATATAATGGAATTATTAGATTCATCAAATCAAAAACCTGCATAGAAATAAAGGAAAGCATTG
TAGGCCAACTGAAAAATTCCTGGCGCAATGTTGAGAAAGGTATAGATTACACTTGGATCATTGATAATAAGGATGATGAA
TTTACCAAATGGATAATTAACTACTTTAAGAAAAGCAAACTCGACCCATGGTTTTTACCATACGAGTTAGACCGAGATAT
AGCTCATTACTCTATTATTACAATTCTAGACCTTTGGGATCCAAAAGATATCATTCCTAATTTTATGAGTAAACATCAAT
TTATAGAAAAGCTAAAGAAAGCATCTGTTCAGAAAAAACATAGGATGAAACTAAAAAATAAAAAAGTATATACCTTTGAA
ATGCATACTGACATAGGAAGAAAGCTAGACAGATTAGCTAACCTATTGGAGATAAAAAAGAATCATCTTCTAGAAGAACT
GATAAACAATAAGTATGAATCGATATCTAGATTTAAAAAAAATTGA

Upstream 100 bases:

>100_bases
TGCACACCGCAAAACCCATCAAATCCACAGGAAAAAGCAAGACTGTAAAACTCATAAAAATTACTATGTAACTTTCATTA
AAACAACGTAAATACACATT

Downstream 100 bases:

>100_bases
TCACACAAGTAAACCAGCTCTCGTTAACGAGAGCTGGTTTACTAAGAGAGAAAATAAGAGAACTTTTCAATCAAACATCA
TTTAATATTTTAACGATTAT

Product: hypothetical protein

Products: NA

Alternate protein names: Ribbon-Helix-Helix Protein CopG Family

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MTNINELFKYSYLTDWIDSNNTRQCLYLLSKIYLVHMRAREVIVDHTIDSERLKSKLTATFKPMYDPPIDYEINFKQDII
LAFEHYPRHSMQETFITSSHVINPKEIVDKNEIYNGIIRFIKSKTCIEIKESIVGQLKNSWRNVEKGIDYTWIIDNKDDE
FTKWIINYFKKSKLDPWFLPYELDRDIAHYSIITILDLWDPKDIIPNFMSKHQFIEKLKKASVQKKHRMKLKNKKVYTFE
MHTDIGRKLDRLANLLEIKKNHLLEELINNKYESISRFKKN

Sequences:

>Translated_281_residues
MTNINELFKYSYLTDWIDSNNTRQCLYLLSKIYLVHMRAREVIVDHTIDSERLKSKLTATFKPMYDPPIDYEINFKQDII
LAFEHYPRHSMQETFITSSHVINPKEIVDKNEIYNGIIRFIKSKTCIEIKESIVGQLKNSWRNVEKGIDYTWIIDNKDDE
FTKWIINYFKKSKLDPWFLPYELDRDIAHYSIITILDLWDPKDIIPNFMSKHQFIEKLKKASVQKKHRMKLKNKKVYTFE
MHTDIGRKLDRLANLLEIKKNHLLEELINNKYESISRFKKN
>Mature_280_residues
TNINELFKYSYLTDWIDSNNTRQCLYLLSKIYLVHMRAREVIVDHTIDSERLKSKLTATFKPMYDPPIDYEINFKQDIIL
AFEHYPRHSMQETFITSSHVINPKEIVDKNEIYNGIIRFIKSKTCIEIKESIVGQLKNSWRNVEKGIDYTWIIDNKDDEF
TKWIINYFKKSKLDPWFLPYELDRDIAHYSIITILDLWDPKDIIPNFMSKHQFIEKLKKASVQKKHRMKLKNKKVYTFEM
HTDIGRKLDRLANLLEIKKNHLLEELINNKYESISRFKKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33875; Mature: 33743

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNINELFKYSYLTDWIDSNNTRQCLYLLSKIYLVHMRAREVIVDHTIDSERLKSKLTAT
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
FKPMYDPPIDYEINFKQDIILAFEHYPRHSMQETFITSSHVINPKEIVDKNEIYNGIIRF
HCCCCCCCCCEEECCCHHEEEEEHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
IKSKTCIEIKESIVGQLKNSWRNVEKGIDYTWIIDNKDDEFTKWIINYFKKSKLDPWFLP
HHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCC
YELDRDIAHYSIITILDLWDPKDIIPNFMSKHQFIEKLKKASVQKKHRMKLKNKKVYTFE
HHHCCCHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
MHTDIGRKLDRLANLLEIKKNHLLEELINNKYESISRFKKN
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TNINELFKYSYLTDWIDSNNTRQCLYLLSKIYLVHMRAREVIVDHTIDSERLKSKLTAT
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
FKPMYDPPIDYEINFKQDIILAFEHYPRHSMQETFITSSHVINPKEIVDKNEIYNGIIRF
HCCCCCCCCCEEECCCHHEEEEEHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
IKSKTCIEIKESIVGQLKNSWRNVEKGIDYTWIIDNKDDEFTKWIINYFKKSKLDPWFLP
HHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCC
YELDRDIAHYSIITILDLWDPKDIIPNFMSKHQFIEKLKKASVQKKHRMKLKNKKVYTFE
HHHCCCHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
MHTDIGRKLDRLANLLEIKKNHLLEELINNKYESISRFKKN
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA