Click here to switch to the map view.

The map label for this gene is 227081917

Identifier: 227081917

GI number: 227081917

Start: 1869018

End: 1869878

Strand: Direct

Name: 227081917

Synonym: VCM66_1710

Alternate gene names: NA

Gene position: 1869018-1869878 (Clockwise)

Preceding gene: 227081905

Following gene: 227081925

Centisome position: 64.62

GC content: 44.83

Gene sequence:

>861_bases
ATGAGTGCATGGCCAATTCGATGGGATCTGCTGTTTCGATACCGAATGATTGAGATTATTGCTTTATGGGAAGGGCGTTT
GACCACCAACCATCTGATCCAGAGCTTTGGTATCGGGCGTCAACAAGCTTCTAAAGACATCAATACTTATCTTGCGGATA
TTGCACCTGGCAACTTGGTTTACGATAAGCACCTCAAAGGCTATAAGCCCAGTGATAGCTTTAGCCCTAAACTCACCTCC
GGCCATGCCGATGAATACTTGCATATTCTTTCGCGTAGTGAGGATATGACGGTCACTTTTAATGAGCTCGATATGGGCTT
TGAACATTCCACTATGGTTCGCCCAGTAACACGCAACATTTCGCCACAAGTATTACGTCCTTTGGTGCAGGCGATACGAG
AGAAAAAACGTGTCGATATTTGCTACACATCGCTAAAAGATGGTGAGCAATCTGAGCGCATTATTTCCCCGCATACTCTT
GTTTGCACACCATTACGCTGGCACGTTCGCGCTTATTGTGAACAGGCTGGTGGCTATCGTGATTTTGTCTTAAGCCGCAT
ACAAGGTATTCCTGACATCAACAATAATGCGATACACGGTAAACGTGACGATGTACTTTGGAATACCAAAGTGAACGTAG
AACTCATCCCCGATCTTCGCCTAAATGAAAAACAACGCGCGGTGATAGAAAAAGATTATGCGATGAGTGACGGCGTTTTG
CGAATTGCCACCAACGCGTCACTCGTTCGCTATGTGCTTGATACCTATAACATTGATATCCATGTACAAAAATCTAATCC
TCAAGGACAACAGATTGTGCTGGGGAATCGGGATGAGCTTATATCCTACGTTTTGGAGTAG

Upstream 100 bases:

>100_bases
GTTGTTGATGTTTTATTAATCGGACCATAATGTAACGCCAATAGCGACAGGTAAATACTGAATACATGAACATGTCGAAT
AACTAGACAGGAATCTAACA

Downstream 100 bases:

>100_bases
GTTCATTGAAACATTTAATACATTCATTCCCATTGTTAATGACGAAGCGCATAACTATAAAAAATTAATCCATTAATAAT
GATAAGCATCTTGTCATTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MSAWPIRWDLLFRYRMIEIIALWEGRLTTNHLIQSFGIGRQQASKDINTYLADIAPGNLVYDKHLKGYKPSDSFSPKLTS
GHADEYLHILSRSEDMTVTFNELDMGFEHSTMVRPVTRNISPQVLRPLVQAIREKKRVDICYTSLKDGEQSERIISPHTL
VCTPLRWHVRAYCEQAGGYRDFVLSRIQGIPDINNNAIHGKRDDVLWNTKVNVELIPDLRLNEKQRAVIEKDYAMSDGVL
RIATNASLVRYVLDTYNIDIHVQKSNPQGQQIVLGNRDELISYVLE

Sequences:

>Translated_286_residues
MSAWPIRWDLLFRYRMIEIIALWEGRLTTNHLIQSFGIGRQQASKDINTYLADIAPGNLVYDKHLKGYKPSDSFSPKLTS
GHADEYLHILSRSEDMTVTFNELDMGFEHSTMVRPVTRNISPQVLRPLVQAIREKKRVDICYTSLKDGEQSERIISPHTL
VCTPLRWHVRAYCEQAGGYRDFVLSRIQGIPDINNNAIHGKRDDVLWNTKVNVELIPDLRLNEKQRAVIEKDYAMSDGVL
RIATNASLVRYVLDTYNIDIHVQKSNPQGQQIVLGNRDELISYVLE
>Mature_285_residues
SAWPIRWDLLFRYRMIEIIALWEGRLTTNHLIQSFGIGRQQASKDINTYLADIAPGNLVYDKHLKGYKPSDSFSPKLTSG
HADEYLHILSRSEDMTVTFNELDMGFEHSTMVRPVTRNISPQVLRPLVQAIREKKRVDICYTSLKDGEQSERIISPHTLV
CTPLRWHVRAYCEQAGGYRDFVLSRIQGIPDINNNAIHGKRDDVLWNTKVNVELIPDLRLNEKQRAVIEKDYAMSDGVLR
IATNASLVRYVLDTYNIDIHVQKSNPQGQQIVLGNRDELISYVLE

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32906; Mature: 32775

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAWPIRWDLLFRYRMIEIIALWEGRLTTNHLIQSFGIGRQQASKDINTYLADIAPGNLV
CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEE
YDKHLKGYKPSDSFSPKLTSGHADEYLHILSRSEDMTVTFNELDMGFEHSTMVRPVTRNI
ECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCEECHHHCCC
SPQVLRPLVQAIREKKRVDICYTSLKDGEQSERIISPHTLVCTPLRWHVRAYCEQAGGYR
CHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEECCCEEEECCHHHHHHHHHHHCCCHH
DFVLSRIQGIPDINNNAIHGKRDDVLWNTKVNVELIPDLRLNEKQRAVIEKDYAMSDGVL
HHHHHHHCCCCCCCCCCCCCCCCCEEEECEEEEEECCCCCCCCHHHHHHHHCCCCCCCEE
RIATNASLVRYVLDTYNIDIHVQKSNPQGQQIVLGNRDELISYVLE
EEECCHHHHHHHHHHCCEEEEEECCCCCCCEEEECCHHHHHHHHCC
>Mature Secondary Structure 
SAWPIRWDLLFRYRMIEIIALWEGRLTTNHLIQSFGIGRQQASKDINTYLADIAPGNLV
CCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEE
YDKHLKGYKPSDSFSPKLTSGHADEYLHILSRSEDMTVTFNELDMGFEHSTMVRPVTRNI
ECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCEECHHHCCC
SPQVLRPLVQAIREKKRVDICYTSLKDGEQSERIISPHTLVCTPLRWHVRAYCEQAGGYR
CHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEECCCEEEECCHHHHHHHHHHHCCCHH
DFVLSRIQGIPDINNNAIHGKRDDVLWNTKVNVELIPDLRLNEKQRAVIEKDYAMSDGVL
HHHHHHHCCCCCCCCCCCCCCCCCEEEECEEEEEECCCCCCCCHHHHHHHHCCCCCCCEE
RIATNASLVRYVLDTYNIDIHVQKSNPQGQQIVLGNRDELISYVLE
EEECCHHHHHHHHHHCCEEEEEECCCCCCCEEEECCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA