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The map label for this gene is 227081915

Identifier: 227081915

GI number: 227081915

Start: 1863283

End: 1865346

Strand: Reverse

Name: 227081915

Synonym: VCM66_1708

Alternate gene names: NA

Gene position: 1865346-1863283 (Counterclockwise)

Preceding gene: 227081916

Following gene: 227081914

Centisome position: 64.49

GC content: 41.72

Gene sequence:

>2064_bases
ATGGTTACACCACAGCTAGAACCTTCCTCGCAGGGGCCCTTATCAACCTTAATTGAACAAATATCAATTGATACTGATTG
GGTTGATAGAAGCTTCGCGATTTACTGTGTCAGTTATAAAGGCATAGACTTCTCAGAACGACCTAAGCGTTTGGTGACAT
TGGCGTCTGAAACCTATAAATCAGGAAGTGTCTATTGCTTAGTCAAAGGTGCCAATAAAGAAGCGTGTTATTGGGTGTTG
TTACCAAAGGATTCAAAGTTAGATCTCAAAGATACGTCTTTGGCCATTAAACCAAGTAGTGCTGCCGAGCTACCTACATG
GCAGTTGGCTCGTTTATTGATTAAAGCGATACCCAAAGTATTGAGTGGCACAATGCCTGAGATAAAGCGCTTTGAAAGTG
AAGGTTTGTATTATTTAGTCAAAAGCAAAAAGTTACCGAAAGATCACTCTGGCTATGAATTAACGACCGTCGAAATCGAC
TTAGCTCCATGTGCAGCACTTGGATTCAAACAAACACTTTCAATGGGCACTAAAACATTTTCTCCCTTGTCTTGGTTTAC
GCTAGAGAACGGAGAAGTACAAAAAAAGGCAAGGTTTGCTACACGTTATCAACTTGACGATGTTGGGAAGTTGGTCAGTA
AATCCATAAAGGGCGACTACATCAAGAAGCCGCTTTACTCTAATGCGAAGAATCGAATTCAGGCGATTGATATCACCAAA
GAATCTTATAGCGGTTTTCAATTATCTAAGGTCGGTATTCTTGAACAGTTTATGCAAGATCTTAAGCAAGCTTATGGTGA
TTCAGTATCCGTGAAGTTGCAGCGGATTCCCGGGGAAAAGCACAGATTTGTTTCAGATACGATTGTCAAAAATCACTATG
TAGGGCTGTTTGATGCGTTGAAAGAGCATCGTTTGGTGATCTGTGATTTAACCGAAAACCAAGACACAGACGCTGCATTA
ACCTTGCTTCATGGTATCGAGCATCTAGATATAAATGCAGAAATAGCTGAAGTTCCGATTCGTGGGGCATTGAATATCCT
AATTGTTGGTAATAAAGACACCTACAAGTCAGATGAAGAAGACCCGTATCAGGTTTATCGCAAGAAGTACCAAGATACGG
TTTTCCAGTCGTGTTACCCAGAGCGCTTATGGAACCGTCAAGGCCAGCCAAACCGCCATGTGGTGGAAGTGCTGTTAAAA
GAACTACTTATCAAGCTAGAAGTCCATACAAGAAAACATTTGATTGAGTACCCAAGTGGGCCTGAAAGATGTGTGTATTA
CATGCCTCAGCGACCAAAAGACGAGTCTTCAGAGGTTCGAGACGAGCCGTGGCCAGTGTATGCGTCTAAGTTAGTTGGCG
ATGAATGGCAATATACACAAGCGACCCAAGAGGAGCTTGAAGATATTGAACTCGATTTAGGTAATGATAAAAGGCATGTA
TTTCATGGGTTTGAACGTTCTCCTGTTATTTATTGGCCGGAGACGGGGGACTATGCCATTTTCATTGACACTGGCATTCA
AATGCTTCCGGAATTTGAAGCGGTTGCAGAGCGATTGCGTGAACTCAAAGAAGGGCGATCACAAGATGTCCCGATTGCAT
TGTTGGCTCAGTTCATTGAAGAAAACCCAGAGAGTAAAGTAATAAACAAACTGAGAGCGATATTGTCAGAGTGGGATGAT
GTAGCACCTCTACCGTTTGATGAGTTTTCTACAATCGCGTACAAAAGCAGTGATGAAAAACAATTCTATGATTGGCTGCG
TGAACAAGGATTCTTTTTAAAAACATCGATAAGAGGGCAAAGTGAGGGATTCTTTAATGCATCTTTAGGATTCTTCTATA
ACCGAGAGCAGGGGATGTACTTTGCTGGTGGTAAAGGCAGCCCACAAAGTAAAATCGAGACCTTTAGCCATTTATACCTG
ATAAAACATTCGTTTGATGCACTACCTGAAGAGGTAGAAAACTTGTTTGACGTTTATCACTTAAGGCATCGCTTACCAAC
CGTAACGCCTTATCCATTTAAGCATCTACGTGAGTATGTTGAGATGCAGCGTTTTAGATCTTGA

Upstream 100 bases:

>100_bases
TAGAAACCTCACCACAGTTAGCTAAAGTTATTGAGATTCCGGCACTAATTGATGATAGCAATGCCGACACCAACCGAACA
GCAGTACAGGAGTTGATAAA

Downstream 100 bases:

>100_bases
TAGCAGACTAAACCACGGTGCTAGTAACGAGCAGAAACGCATGTTTTATTCGCTACTAGTGCCAAAAGTCAGTAAAATTC
TGCCCAATCATCCCTATTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 687; Mature: 687

Protein sequence:

>687_residues
MVTPQLEPSSQGPLSTLIEQISIDTDWVDRSFAIYCVSYKGIDFSERPKRLVTLASETYKSGSVYCLVKGANKEACYWVL
LPKDSKLDLKDTSLAIKPSSAAELPTWQLARLLIKAIPKVLSGTMPEIKRFESEGLYYLVKSKKLPKDHSGYELTTVEID
LAPCAALGFKQTLSMGTKTFSPLSWFTLENGEVQKKARFATRYQLDDVGKLVSKSIKGDYIKKPLYSNAKNRIQAIDITK
ESYSGFQLSKVGILEQFMQDLKQAYGDSVSVKLQRIPGEKHRFVSDTIVKNHYVGLFDALKEHRLVICDLTENQDTDAAL
TLLHGIEHLDINAEIAEVPIRGALNILIVGNKDTYKSDEEDPYQVYRKKYQDTVFQSCYPERLWNRQGQPNRHVVEVLLK
ELLIKLEVHTRKHLIEYPSGPERCVYYMPQRPKDESSEVRDEPWPVYASKLVGDEWQYTQATQEELEDIELDLGNDKRHV
FHGFERSPVIYWPETGDYAIFIDTGIQMLPEFEAVAERLRELKEGRSQDVPIALLAQFIEENPESKVINKLRAILSEWDD
VAPLPFDEFSTIAYKSSDEKQFYDWLREQGFFLKTSIRGQSEGFFNASLGFFYNREQGMYFAGGKGSPQSKIETFSHLYL
IKHSFDALPEEVENLFDVYHLRHRLPTVTPYPFKHLREYVEMQRFRS

Sequences:

>Translated_687_residues
MVTPQLEPSSQGPLSTLIEQISIDTDWVDRSFAIYCVSYKGIDFSERPKRLVTLASETYKSGSVYCLVKGANKEACYWVL
LPKDSKLDLKDTSLAIKPSSAAELPTWQLARLLIKAIPKVLSGTMPEIKRFESEGLYYLVKSKKLPKDHSGYELTTVEID
LAPCAALGFKQTLSMGTKTFSPLSWFTLENGEVQKKARFATRYQLDDVGKLVSKSIKGDYIKKPLYSNAKNRIQAIDITK
ESYSGFQLSKVGILEQFMQDLKQAYGDSVSVKLQRIPGEKHRFVSDTIVKNHYVGLFDALKEHRLVICDLTENQDTDAAL
TLLHGIEHLDINAEIAEVPIRGALNILIVGNKDTYKSDEEDPYQVYRKKYQDTVFQSCYPERLWNRQGQPNRHVVEVLLK
ELLIKLEVHTRKHLIEYPSGPERCVYYMPQRPKDESSEVRDEPWPVYASKLVGDEWQYTQATQEELEDIELDLGNDKRHV
FHGFERSPVIYWPETGDYAIFIDTGIQMLPEFEAVAERLRELKEGRSQDVPIALLAQFIEENPESKVINKLRAILSEWDD
VAPLPFDEFSTIAYKSSDEKQFYDWLREQGFFLKTSIRGQSEGFFNASLGFFYNREQGMYFAGGKGSPQSKIETFSHLYL
IKHSFDALPEEVENLFDVYHLRHRLPTVTPYPFKHLREYVEMQRFRS
>Mature_687_residues
MVTPQLEPSSQGPLSTLIEQISIDTDWVDRSFAIYCVSYKGIDFSERPKRLVTLASETYKSGSVYCLVKGANKEACYWVL
LPKDSKLDLKDTSLAIKPSSAAELPTWQLARLLIKAIPKVLSGTMPEIKRFESEGLYYLVKSKKLPKDHSGYELTTVEID
LAPCAALGFKQTLSMGTKTFSPLSWFTLENGEVQKKARFATRYQLDDVGKLVSKSIKGDYIKKPLYSNAKNRIQAIDITK
ESYSGFQLSKVGILEQFMQDLKQAYGDSVSVKLQRIPGEKHRFVSDTIVKNHYVGLFDALKEHRLVICDLTENQDTDAAL
TLLHGIEHLDINAEIAEVPIRGALNILIVGNKDTYKSDEEDPYQVYRKKYQDTVFQSCYPERLWNRQGQPNRHVVEVLLK
ELLIKLEVHTRKHLIEYPSGPERCVYYMPQRPKDESSEVRDEPWPVYASKLVGDEWQYTQATQEELEDIELDLGNDKRHV
FHGFERSPVIYWPETGDYAIFIDTGIQMLPEFEAVAERLRELKEGRSQDVPIALLAQFIEENPESKVINKLRAILSEWDD
VAPLPFDEFSTIAYKSSDEKQFYDWLREQGFFLKTSIRGQSEGFFNASLGFFYNREQGMYFAGGKGSPQSKIETFSHLYL
IKHSFDALPEEVENLFDVYHLRHRLPTVTPYPFKHLREYVEMQRFRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 79094; Mature: 79094

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTPQLEPSSQGPLSTLIEQISIDTDWVDRSFAIYCVSYKGIDFSERPKRLVTLASETYK
CCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCHHHEEEHHHHCC
SGSVYCLVKGANKEACYWVLLPKDSKLDLKDTSLAIKPSSAAELPTWQLARLLIKAIPKV
CCCEEEEEECCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHH
LSGTMPEIKRFESEGLYYLVKSKKLPKDHSGYELTTVEIDLAPCAALGFKQTLSMGTKTF
HCCCCHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHCCCCC
SPLSWFTLENGEVQKKARFATRYQLDDVGKLVSKSIKGDYIKKPLYSNAKNRIQAIDITK
CCEEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHCCHHCCHHCCEEEEEEEC
ESYSGFQLSKVGILEQFMQDLKQAYGDSVSVKLQRIPGEKHRFVSDTIVKNHYVGLFDAL
CCCCCEEEHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
KEHRLVICDLTENQDTDAALTLLHGIEHLDINAEIAEVPIRGALNILIVGNKDTYKSDEE
HHCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHEECCCCCCEEEEEECCCCCCCCCCC
DPYQVYRKKYQDTVFQSCYPERLWNRQGQPNRHVVEVLLKELLIKLEVHTRKHLIEYPSG
CHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PERCVYYMPQRPKDESSEVRDEPWPVYASKLVGDEWQYTQATQEELEDIELDLGNDKRHV
CCCEEEECCCCCCCCCHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHEEECCCCCCHHH
FHGFERSPVIYWPETGDYAIFIDTGIQMLPEFEAVAERLRELKEGRSQDVPIALLAQFIE
HCCCCCCCEEECCCCCCEEEEEECCHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
ENPESKVINKLRAILSEWDDVAPLPFDEFSTIAYKSSDEKQFYDWLREQGFFLKTSIRGQ
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHCCCEEEEECCCC
SEGFFNASLGFFYNREQGMYFAGGKGSPQSKIETFSHLYLIKHSFDALPEEVENLFDVYH
CCCCEEECCCEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
LRHRLPTVTPYPFKHLREYVEMQRFRS
HHHHCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVTPQLEPSSQGPLSTLIEQISIDTDWVDRSFAIYCVSYKGIDFSERPKRLVTLASETYK
CCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCHHHEEEHHHHCC
SGSVYCLVKGANKEACYWVLLPKDSKLDLKDTSLAIKPSSAAELPTWQLARLLIKAIPKV
CCCEEEEEECCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHH
LSGTMPEIKRFESEGLYYLVKSKKLPKDHSGYELTTVEIDLAPCAALGFKQTLSMGTKTF
HCCCCHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHCCCCC
SPLSWFTLENGEVQKKARFATRYQLDDVGKLVSKSIKGDYIKKPLYSNAKNRIQAIDITK
CCEEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHCCHHCCHHCCEEEEEEEC
ESYSGFQLSKVGILEQFMQDLKQAYGDSVSVKLQRIPGEKHRFVSDTIVKNHYVGLFDAL
CCCCCEEEHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
KEHRLVICDLTENQDTDAALTLLHGIEHLDINAEIAEVPIRGALNILIVGNKDTYKSDEE
HHCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHEECCCCCCEEEEEECCCCCCCCCCC
DPYQVYRKKYQDTVFQSCYPERLWNRQGQPNRHVVEVLLKELLIKLEVHTRKHLIEYPSG
CHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PERCVYYMPQRPKDESSEVRDEPWPVYASKLVGDEWQYTQATQEELEDIELDLGNDKRHV
CCCEEEECCCCCCCCCHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHEEECCCCCCHHH
FHGFERSPVIYWPETGDYAIFIDTGIQMLPEFEAVAERLRELKEGRSQDVPIALLAQFIE
HCCCCCCCEEECCCCCCEEEEEECCHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
ENPESKVINKLRAILSEWDDVAPLPFDEFSTIAYKSSDEKQFYDWLREQGFFLKTSIRGQ
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHCCCEEEEECCCC
SEGFFNASLGFFYNREQGMYFAGGKGSPQSKIETFSHLYLIKHSFDALPEEVENLFDVYH
CCCCEEECCCEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
LRHRLPTVTPYPFKHLREYVEMQRFRS
HHHHCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA