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The map label for this gene is 227081913

Identifier: 227081913

GI number: 227081913

Start: 1859416

End: 1860804

Strand: Reverse

Name: 227081913

Synonym: VCM66_1706

Alternate gene names: NA

Gene position: 1860804-1859416 (Counterclockwise)

Preceding gene: 227081914

Following gene: 227081912

Centisome position: 64.33

GC content: 40.68

Gene sequence:

>1389_bases
TTGCTGACATTTTGGGCATCTCTGTGGCTAAGGTTCAGGGGTAAGCTGATGAGCAATACTATGATTAAGAAGATGCCCAA
ATACGAGTCTTACAAAGACTCTTGTGAGCAATGGATTGGTGACATCCCCGCTCATTGGGAAGTTTATAGGTTAAAAAGCG
CTGTATATGAGTGCTCAAATGGTATTTGGGGAAGTGATCCTAACGGTAGGGACGAAATAGTCGTGCTGAGGGTTGCTGAC
TTTGATGATCACAAACTCAAAATATCAGATGAAAAACTTACTTATCGCTCAATTCCAGCAAAAGAGCGCCAGGGGCGTCT
GTTAAAAAATGGAGATTTGCTGATCGAAAAATCTGGTGGGGGAGATAAAACTCTAGTCGGAAGAGTAGTATTGTTTGATA
AACAATACCCAGCAGTAACATCTAATTTTGTCGCAAAAATGACACCTAAAGAGTGGGTTATATCTGGATTCTTGAAGTAC
GTATTTTCTGCTTTATACAATAATGGAGTTAACTATCTTTCTATAAAGCAAACTACTGGCATACAGAATCTCGATGCTAG
CTCATATCTAAATGAAAAATTTTGTATCCCTCAAAAAGAGGAGCAATATGAAATAGCTAAGTTTCTCGACAACAAAACGA
CACAGATAAATGAAGCAATCGCAATCAAACAAAAGCAAATCGAGCTGCTAAAAGAACGCAAACAAATCATCATTCAGCAA
GCAGTGACACAAGGTTTGAATCCCGATGCAACGATGAAATATTCAGGTGTGGATTGGATAGGAGCTATTCCAGGGCATTG
GATCGTCAAAAGAGCTAAATACCTTTTAGATGAAATCAATGAGCGTTCAGAGACAGGGCTTGAAGAGCTACTTTCAGTTT
CCCACATGACTGGCGTAACTCCACGATCCGAGAAAAACGTCACCATGTTCATGGCGGAAGACTACACAGGTTCAAAGCTC
TGCCACTCTGGTGATCTAGTGATCAACATAATGTGGGCATGGATGGGAGCGTTAGGTGTATCTGACAGAACTGGTATTGT
GAGCCCATCATATGGCGTATTCCGTGAACAGCGCGAGGGCACTTTTGTACCTAAATATCTGGAGATGTTGCTGAAATCAA
CTAAGTATGTTGAATACTACAACAAGGTCTCTACAGGACTTCATTCTTCTCGATTACGTTTTTATGGGCACATGTTGTTT
GATATGGCTTTGGGCTTTCCTCCTTATGAAGAACAAACACAAATTGTTGAATACATAAGCAGAGAATGTTCGAAAGTTGA
TGAAGCAATAACTGTTCAGGCTGAGCAAGTAAGTAAGCTCAAAGAATACAAAACCACTCTCATCAACAGCGCTGTAACCG
GCAAAATCAAAGTAACGGAGCTGGCGTAA

Upstream 100 bases:

>100_bases
ATCAGCTTTAACAAGTACTTCTATCGCCATAAGCCACTGCGCTCAATGGATGAGGTCGCTGGTGACATTATTGCGCTTGA
ACAAAAAGCGGAAGGCTTAA

Downstream 100 bases:

>100_bases
ATGGCGGTTGTTGTTGCCAGTTGCACACTGGATAAGCTGTTTTCTAATGAGTCGATTTTAGCTTCTGACGGTAAAGTTCA
AAAAAACGTTCACGGGATGC

Product: hypothetical protein

Products: NA

Alternate protein names: Restriction System DNA Specificity Domain Protein; Type I Restriction- System Specificity Determinant; Type I Restriction- System S Subunit; Type I Restriction- System Specificity Subunit; Restriction Endonuclease S Subunit; Type I Restriction S Subunit; Type I Restriction- System; Type I Site-Specific Restriction- System S Subunit; Type I Restriction Specificity Protein; Type I Restriction-; Type I Restriction DNA Specificity Domain Protein; Restriction Endonuclease S Subunits-Like Protein; Restriction System DNA Specificity Domain; Type I Site-Specific Deoxyribonuclease; Type I Restriction- Subunit S; Type I Restriction- System Specifity Subunit; Restriction Endonuclease S Subunits-Like; Type I Restriction System DNA Specificity Domain Protein; Type I Restriction Endonuclease S Subunit; Type I Restriction DNA Specificity Protein; Type I DNA Specificity S Subunit; Type I Restriction-Mod; Type I Restriction- S Subunit; Type I Restriction System Specificity Protein HsdS; Type I Restriction- System Subunit S; Type I Restriction- System Specificity Subunit S; Type I Restriction; Type I Restriction- System Specificity Protein; Type 1 Restriction- System Endonuclease Subunit; Restriction Endonuclease S Subunits

Number of amino acids: Translated: 462; Mature: 462

Protein sequence:

>462_residues
MLTFWASLWLRFRGKLMSNTMIKKMPKYESYKDSCEQWIGDIPAHWEVYRLKSAVYECSNGIWGSDPNGRDEIVVLRVAD
FDDHKLKISDEKLTYRSIPAKERQGRLLKNGDLLIEKSGGGDKTLVGRVVLFDKQYPAVTSNFVAKMTPKEWVISGFLKY
VFSALYNNGVNYLSIKQTTGIQNLDASSYLNEKFCIPQKEEQYEIAKFLDNKTTQINEAIAIKQKQIELLKERKQIIIQQ
AVTQGLNPDATMKYSGVDWIGAIPGHWIVKRAKYLLDEINERSETGLEELLSVSHMTGVTPRSEKNVTMFMAEDYTGSKL
CHSGDLVINIMWAWMGALGVSDRTGIVSPSYGVFREQREGTFVPKYLEMLLKSTKYVEYYNKVSTGLHSSRLRFYGHMLF
DMALGFPPYEEQTQIVEYISRECSKVDEAITVQAEQVSKLKEYKTTLINSAVTGKIKVTELA

Sequences:

>Translated_462_residues
MLTFWASLWLRFRGKLMSNTMIKKMPKYESYKDSCEQWIGDIPAHWEVYRLKSAVYECSNGIWGSDPNGRDEIVVLRVAD
FDDHKLKISDEKLTYRSIPAKERQGRLLKNGDLLIEKSGGGDKTLVGRVVLFDKQYPAVTSNFVAKMTPKEWVISGFLKY
VFSALYNNGVNYLSIKQTTGIQNLDASSYLNEKFCIPQKEEQYEIAKFLDNKTTQINEAIAIKQKQIELLKERKQIIIQQ
AVTQGLNPDATMKYSGVDWIGAIPGHWIVKRAKYLLDEINERSETGLEELLSVSHMTGVTPRSEKNVTMFMAEDYTGSKL
CHSGDLVINIMWAWMGALGVSDRTGIVSPSYGVFREQREGTFVPKYLEMLLKSTKYVEYYNKVSTGLHSSRLRFYGHMLF
DMALGFPPYEEQTQIVEYISRECSKVDEAITVQAEQVSKLKEYKTTLINSAVTGKIKVTELA
>Mature_462_residues
MLTFWASLWLRFRGKLMSNTMIKKMPKYESYKDSCEQWIGDIPAHWEVYRLKSAVYECSNGIWGSDPNGRDEIVVLRVAD
FDDHKLKISDEKLTYRSIPAKERQGRLLKNGDLLIEKSGGGDKTLVGRVVLFDKQYPAVTSNFVAKMTPKEWVISGFLKY
VFSALYNNGVNYLSIKQTTGIQNLDASSYLNEKFCIPQKEEQYEIAKFLDNKTTQINEAIAIKQKQIELLKERKQIIIQQ
AVTQGLNPDATMKYSGVDWIGAIPGHWIVKRAKYLLDEINERSETGLEELLSVSHMTGVTPRSEKNVTMFMAEDYTGSKL
CHSGDLVINIMWAWMGALGVSDRTGIVSPSYGVFREQREGTFVPKYLEMLLKSTKYVEYYNKVSTGLHSSRLRFYGHMLF
DMALGFPPYEEQTQIVEYISRECSKVDEAITVQAEQVSKLKEYKTTLINSAVTGKIKVTELA

Specific function: Unknown

COG id: COG0732

COG function: function code V; Restriction endonuclease S subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52758; Mature: 52758

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTFWASLWLRFRGKLMSNTMIKKMPKYESYKDSCEQWIGDIPAHWEVYRLKSAVYECSN
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
GIWGSDPNGRDEIVVLRVADFDDHKLKISDEKLTYRSIPAKERQGRLLKNGDLLIEKSGG
CCCCCCCCCCCCEEEEEEECCCCCEEEECCCCEEEECCCCHHHCCCEEECCCEEEEECCC
GDKTLVGRVVLFDKQYPAVTSNFVAKMTPKEWVISGFLKYVFSALYNNGVNYLSIKQTTG
CCCEEEEEEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC
IQNLDASSYLNEKFCIPQKEEQYEIAKFLDNKTTQINEAIAIKQKQIELLKERKQIIIQQ
CCCCCHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVTQGLNPDATMKYSGVDWIGAIPGHWIVKRAKYLLDEINERSETGLEELLSVSHMTGVT
HHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC
PRSEKNVTMFMAEDYTGSKLCHSGDLVINIMWAWMGALGVSDRTGIVSPSYGVFREQREG
CCCCCCEEEEEECCCCCCCCCCCCCHHEEEHHHHHHHCCCCCCCCCCCCCHHHHHHCCCC
TFVPKYLEMLLKSTKYVEYYNKVSTGLHSSRLRFYGHMLFDMALGFPPYEEQTQIVEYIS
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
RECSKVDEAITVQAEQVSKLKEYKTTLINSAVTGKIKVTELA
HHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHCCCEEEEEECC
>Mature Secondary Structure
MLTFWASLWLRFRGKLMSNTMIKKMPKYESYKDSCEQWIGDIPAHWEVYRLKSAVYECSN
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
GIWGSDPNGRDEIVVLRVADFDDHKLKISDEKLTYRSIPAKERQGRLLKNGDLLIEKSGG
CCCCCCCCCCCCEEEEEEECCCCCEEEECCCCEEEECCCCHHHCCCEEECCCEEEEECCC
GDKTLVGRVVLFDKQYPAVTSNFVAKMTPKEWVISGFLKYVFSALYNNGVNYLSIKQTTG
CCCEEEEEEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC
IQNLDASSYLNEKFCIPQKEEQYEIAKFLDNKTTQINEAIAIKQKQIELLKERKQIIIQQ
CCCCCHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVTQGLNPDATMKYSGVDWIGAIPGHWIVKRAKYLLDEINERSETGLEELLSVSHMTGVT
HHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC
PRSEKNVTMFMAEDYTGSKLCHSGDLVINIMWAWMGALGVSDRTGIVSPSYGVFREQREG
CCCCCCEEEEEECCCCCCCCCCCCCHHEEEHHHHHHHCCCCCCCCCCCCCHHHHHHCCCC
TFVPKYLEMLLKSTKYVEYYNKVSTGLHSSRLRFYGHMLFDMALGFPPYEEQTQIVEYIS
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
RECSKVDEAITVQAEQVSKLKEYKTTLINSAVTGKIKVTELA
HHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA