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The map label for this gene is pqiA [H]

Identifier: 227081900

GI number: 227081900

Start: 1834735

End: 1836039

Strand: Direct

Name: pqiA [H]

Synonym: VCM66_1692

Alternate gene names: 227081900

Gene position: 1834735-1836039 (Clockwise)

Preceding gene: 227081899

Following gene: 227081901

Centisome position: 63.43

GC content: 45.21

Gene sequence:

>1305_bases
ATGACTATGGACAAACTAAAGAATCATTTGATTGGTTGTGACGAGTGTGGGCTAATAACCAACGTACCACTTTTAAGCCA
AGCACAAACTGCGCAGTGTCCTCGTTGCGGGCATACGCTCACCCAAACACCTCAAAAACCGTACCAAACCGCTGTCGCAT
TAACCATCAGTTGCCTGATTTTATTGGTGCTCAGCCTGACGTTTCCTTTTATGTCATTTAGCGTGCAAGGAATGACCCAA
GAAATTACGCTGTTAAATGCAGCCAAAATGCTCGGTGAATTTCAAAACGTTTTATTAGCCATTTTACTCTTTACCACCGT
TATCCTTTTTCCGGCGCTCTACATCACCATACTTCTTTTTGTCTCTTTTAAAGCCGCGCAAAGCACACAACGACAACTTT
CTTCATCCGAGATCCAGCGCGCGAAGCTATTGTGCAAAACATTACTCACAGTTCAGCCGTGGTTAATGGTCGATGTCTTT
TTAATTGGCGTATTAGTCAGTCTCATAAAAATAGCCTCACTAGCCGAGGTAGCGATGGGTTACTCCTTCTGGGCATTTTG
CTTTTTTGCCATGTTGGTTGTGAAAACCGTTTCGCTAGTCGATCGCTATTGGTTGTGGCAACACTTTATTCCCGCCCAAA
CTCCCCAAGGAGTCAACGCTGGGCAAACTCATTGCACACACAACTCGGTCAGTTGCCACACCTGTCAACAGATTAACTTG
CTCAGGCCAGATCAAAAAAAGCCCACTTGTTTACGCTGTGGTAGTCGTTTACACGCTTATCATCCACAGTTGAATTTGCA
GTGGGCTTGGGCACTGTTACTGGCTGCCATCATTTTTTACATTCCAGCGAATCTTTATCCAATGATGTATACCGTGAGCC
TCGGAAAATCAGAAGGCTCAAGCATTATGCAAGGGGTGATCCTTCTGTGGCACCTCGGCTCTTATCCGGTGGCGATGGTG
ATTTTCTTAGCCAGTATTTTTATCCCTATGGCCAAAATGTTTGCACTCGGTTGGCTCTACTGGCAGGCCGGAAAACTCAA
TGTATTTCCAGAGCAGCAGAATCTAAAACGTCTCAAAGTGTATCGCGTAACCGAATTCATTGGCCGCTGGTCAATGATTG
ATATCTTCGTCGTGGCTATTTTGGTGTCTTTAGTACAGTTGCATAATCTGATGGCGATTTATCCCGGCCCGGCAGCGCTC
TCTTTTGCTGCAGTAGTATTATTGACTATGCTCTCAGCCATGGTTTTTGATTCGCGAATCTTGTGGCATGAGCCGCCAGA
ATCCCCACCAACAAAAATAAAATGA

Upstream 100 bases:

>100_bases
CTGCGATAAATCCCAAATGTTACAAGCTCTCAACCTTTAACATCGGCTTGTTATCAATCCTCGTGGAATGATTCCAACCC
ACTAACGATAAATAAAACCA

Downstream 100 bases:

>100_bases
GAAAACTGTCTATGAGTGATGAACCTCAAGTTAATGCTGAAATAACTGCGCAAAAGCAGCTCTCTGCAATTTGGATCATT
CCTATTCTGGCTCTTGCGAT

Product: paraquat-inducible protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 433

Protein sequence:

>434_residues
MTMDKLKNHLIGCDECGLITNVPLLSQAQTAQCPRCGHTLTQTPQKPYQTAVALTISCLILLVLSLTFPFMSFSVQGMTQ
EITLLNAAKMLGEFQNVLLAILLFTTVILFPALYITILLFVSFKAAQSTQRQLSSSEIQRAKLLCKTLLTVQPWLMVDVF
LIGVLVSLIKIASLAEVAMGYSFWAFCFFAMLVVKTVSLVDRYWLWQHFIPAQTPQGVNAGQTHCTHNSVSCHTCQQINL
LRPDQKKPTCLRCGSRLHAYHPQLNLQWAWALLLAAIIFYIPANLYPMMYTVSLGKSEGSSIMQGVILLWHLGSYPVAMV
IFLASIFIPMAKMFALGWLYWQAGKLNVFPEQQNLKRLKVYRVTEFIGRWSMIDIFVVAILVSLVQLHNLMAIYPGPAAL
SFAAVVLLTMLSAMVFDSRILWHEPPESPPTKIK

Sequences:

>Translated_434_residues
MTMDKLKNHLIGCDECGLITNVPLLSQAQTAQCPRCGHTLTQTPQKPYQTAVALTISCLILLVLSLTFPFMSFSVQGMTQ
EITLLNAAKMLGEFQNVLLAILLFTTVILFPALYITILLFVSFKAAQSTQRQLSSSEIQRAKLLCKTLLTVQPWLMVDVF
LIGVLVSLIKIASLAEVAMGYSFWAFCFFAMLVVKTVSLVDRYWLWQHFIPAQTPQGVNAGQTHCTHNSVSCHTCQQINL
LRPDQKKPTCLRCGSRLHAYHPQLNLQWAWALLLAAIIFYIPANLYPMMYTVSLGKSEGSSIMQGVILLWHLGSYPVAMV
IFLASIFIPMAKMFALGWLYWQAGKLNVFPEQQNLKRLKVYRVTEFIGRWSMIDIFVVAILVSLVQLHNLMAIYPGPAAL
SFAAVVLLTMLSAMVFDSRILWHEPPESPPTKIK
>Mature_433_residues
TMDKLKNHLIGCDECGLITNVPLLSQAQTAQCPRCGHTLTQTPQKPYQTAVALTISCLILLVLSLTFPFMSFSVQGMTQE
ITLLNAAKMLGEFQNVLLAILLFTTVILFPALYITILLFVSFKAAQSTQRQLSSSEIQRAKLLCKTLLTVQPWLMVDVFL
IGVLVSLIKIASLAEVAMGYSFWAFCFFAMLVVKTVSLVDRYWLWQHFIPAQTPQGVNAGQTHCTHNSVSCHTCQQINLL
RPDQKKPTCLRCGSRLHAYHPQLNLQWAWALLLAAIIFYIPANLYPMMYTVSLGKSEGSSIMQGVILLWHLGSYPVAMVI
FLASIFIPMAKMFALGWLYWQAGKLNVFPEQQNLKRLKVYRVTEFIGRWSMIDIFVVAILVSLVQLHNLMAIYPGPAALS
FAAVVLLTMLSAMVFDSRILWHEPPESPPTKIK

Specific function: Unknown

COG id: COG2995

COG function: function code S; Uncharacterized paraquat-inducible protein A

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqiA family [H]

Homologues:

Organism=Escherichia coli, GI1787183, Length=419, Percent_Identity=40.5727923627685, Blast_Score=278, Evalue=4e-76,
Organism=Escherichia coli, GI1788137, Length=418, Percent_Identity=27.2727272727273, Blast_Score=155, Evalue=7e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005219
- InterPro:   IPR007498 [H]

Pfam domain/function: PF04403 PqiA [H]

EC number: NA

Molecular weight: Translated: 48693; Mature: 48562

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCCCCCC
>Mature Secondary Structure 
TMDKLKNHLIGCDECGLITNVPLLSQAQTAQCPRCGHTLTQTPQKPYQTAVALTISCLI
CHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHH
LLVLSLTFPFMSFSVQGMTQEITLLNAAKMLGEFQNVLLAILLFTTVILFPALYITILLF
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSFKAAQSTQRQLSSSEIQRAKLLCKTLLTVQPWLMVDVFLIGVLVSLIKIASLAEVAMG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YSFWAFCFFAMLVVKTVSLVDRYWLWQHFIPAQTPQGVNAGQTHCTHNSVSCHTCQQINL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC
LRPDQKKPTCLRCGSRLHAYHPQLNLQWAWALLLAAIIFYIPANLYPMMYTVSLGKSEGS
CCCCCCCCHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHEEEECCCCCCH
SIMQGVILLWHLGSYPVAMVIFLASIFIPMAKMFALGWLYWQAGKLNVFPEQQNLKRLKV
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHH
YRVTEFIGRWSMIDIFVVAILVSLVQLHNLMAIYPGPAALSFAAVVLLTMLSAMVFDSRI
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHCCC
LWHEPPESPPTKIK
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]