| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
Click here to switch to the map view.
The map label for this gene is 227081889
Identifier: 227081889
GI number: 227081889
Start: 1825918
End: 1826055
Strand: Direct
Name: 227081889
Synonym: VCM66_1681
Alternate gene names: NA
Gene position: 1825918-1826055 (Clockwise)
Preceding gene: 227081885
Following gene: 227081890
Centisome position: 63.13
GC content: 42.03
Gene sequence:
>138_bases TTGTGTACGCCCAAAGCCAGATTGTTTTGGGCGTTTTTTTATCTGGTTTATTTTGTTCAAGTCGGTTCATTGGCGATTTT TCAGTCAAAAATTCAGGACTTAGAGCACGGCGATAAGTGGTTAGGCCGCCAGTCATAA
Upstream 100 bases:
>100_bases GTGATTGACAGAGCTTTGAGAGTTTTACTGGCCGTCAAATTTGGTTCTCGACCCGCTGTCACCAATTACGCTGCTTTTTC CTTTTTATTAACTCCTATAC
Downstream 100 bases:
>100_bases GGGTGGTCACTCGGAGAGAGTTTGATCCAAACCCTAGTCGTTGCGATCGAACTGCGTATAATGTGCGACCCCATTCAGAG CTCGATTTTCTTATGCTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 45; Mature: 45
Protein sequence:
>45_residues MCTPKARLFWAFFYLVYFVQVGSLAIFQSKIQDLEHGDKWLGRQS
Sequences:
>Translated_45_residues MCTPKARLFWAFFYLVYFVQVGSLAIFQSKIQDLEHGDKWLGRQS >Mature_45_residues MCTPKARLFWAFFYLVYFVQVGSLAIFQSKIQDLEHGDKWLGRQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5326; Mature: 5326
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCTPKARLFWAFFYLVYFVQVGSLAIFQSKIQDLEHGDKWLGRQS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MCTPKARLFWAFFYLVYFVQVGSLAIFQSKIQDLEHGDKWLGRQS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA