| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is aat [H]
Identifier: 227081883
GI number: 227081883
Start: 1819205
End: 1819936
Strand: Direct
Name: aat [H]
Synonym: VCM66_1675
Alternate gene names: 227081883
Gene position: 1819205-1819936 (Clockwise)
Preceding gene: 227081882
Following gene: 227081884
Centisome position: 62.89
GC content: 50.55
Gene sequence:
>732_bases ATGGCTATTTATCTGACTGAATTATCGCCGGAAACGTTGACATTCCCCTCTCCTTTTACTGCGTTAGATGACCCTAACGG CCTGCTTGCATTTGGCGGCGATCTCCGTCTTGAACGAATTTGGGCGGCTTATCAACAAGGCATTTTCCCTTGGTATGGCC CTGAAGACCCGATTTTGTGGTGGAGCCCTTCCCCACGTGCCGTGTTTGACCCTACTCGGTTTCAACCTGCCAAAAGCGTG AAGAAGTTCCAACGTAAACATCAGTATCGGGTTAGCGTCAATCACGCGACGTCGCAAGTGATTGAGCAGTGCGCGCTCAC TCGCCCTGCGGATCAACGTTGGCTCAATGACTCAATGCGCCATGCGTATGGCGAGTTGGCGAAACAAGGTCGTTGCCATT CTGTTGAGGTGTGGCAGGGCGAACAACTGGTGGGTGGGCTTTATGGCATTTCCGTTGGCCAACTGTTTTGTGGCGAATCC ATGTTTAGCCTCGCAACCAATGCCTCGAAAATTGCGCTTTGGTATTTTTGCGACCATTTTTCTCGCCATCAAGGGCAGTT GATTGATTGCCAAGTGATGAATCCGCATTTGCAATCTTTAGGCGCAACGACCTTGAGCCGTGAACAATTTATCCAATCGT TGCTATCTTTTAAGGAGAAGCAGGTGCTCAGTGGCTGTTTTGAAACTCAGTGGCTCGCCACCCCCACTTCGCCATGTGCC TTTGAGGATTGA
Upstream 100 bases:
>100_bases TTCCAAGCATCAAGATTGGCAAACTTCATCAAAATCACTAAGATCGCGGCTCATTCACTTTCGGAATGGCTCACAGGGAC TTCTAAGGCAAACCAATACG
Downstream 100 bases:
>100_bases TGCATGAGCTCAGATATTCAGCAAATTCGTATTGGCTTAACCAATAACCATCCTTGTAGCTACTTAGCGGATCGGATGGA GCGCGTCGCCGTGGCGATTG
Product: leucyl/phenylalanyl-tRNA--protein transferase
Products: NA
Alternate protein names: L/F-transferase; Leucyltransferase; Phenyalanyltransferase [H]
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MAIYLTELSPETLTFPSPFTALDDPNGLLAFGGDLRLERIWAAYQQGIFPWYGPEDPILWWSPSPRAVFDPTRFQPAKSV KKFQRKHQYRVSVNHATSQVIEQCALTRPADQRWLNDSMRHAYGELAKQGRCHSVEVWQGEQLVGGLYGISVGQLFCGES MFSLATNASKIALWYFCDHFSRHQGQLIDCQVMNPHLQSLGATTLSREQFIQSLLSFKEKQVLSGCFETQWLATPTSPCA FED
Sequences:
>Translated_243_residues MAIYLTELSPETLTFPSPFTALDDPNGLLAFGGDLRLERIWAAYQQGIFPWYGPEDPILWWSPSPRAVFDPTRFQPAKSV KKFQRKHQYRVSVNHATSQVIEQCALTRPADQRWLNDSMRHAYGELAKQGRCHSVEVWQGEQLVGGLYGISVGQLFCGES MFSLATNASKIALWYFCDHFSRHQGQLIDCQVMNPHLQSLGATTLSREQFIQSLLSFKEKQVLSGCFETQWLATPTSPCA FED >Mature_242_residues AIYLTELSPETLTFPSPFTALDDPNGLLAFGGDLRLERIWAAYQQGIFPWYGPEDPILWWSPSPRAVFDPTRFQPAKSVK KFQRKHQYRVSVNHATSQVIEQCALTRPADQRWLNDSMRHAYGELAKQGRCHSVEVWQGEQLVGGLYGISVGQLFCGESM FSLATNASKIALWYFCDHFSRHQGQLIDCQVMNPHLQSLGATTLSREQFIQSLLSFKEKQVLSGCFETQWLATPTSPCAF ED
Specific function: Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine [H]
COG id: COG2360
COG function: function code O; Leu/Phe-tRNA-protein transferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the L/F-transferase family [H]
Homologues:
Organism=Escherichia coli, GI1787111, Length=212, Percent_Identity=50.9433962264151, Blast_Score=225, Evalue=2e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 - InterPro: IPR004616 [H]
Pfam domain/function: PF03588 Leu_Phe_trans [H]
EC number: =2.3.2.6 [H]
Molecular weight: Translated: 27570; Mature: 27438
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIYLTELSPETLTFPSPFTALDDPNGLLAFGGDLRLERIWAAYQQGIFPWYGPEDPILW CEEEEEECCCCEEECCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCEEE WSPSPRAVFDPTRFQPAKSVKKFQRKHQYRVSVNHATSQVIEQCALTRPADQRWLNDSMR ECCCCCCEECCCCCCHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHH HAYGELAKQGRCHSVEVWQGEQLVGGLYGISVGQLFCGESMFSLATNASKIALWYFCDHF HHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEHHHHHH SRHQGQLIDCQVMNPHLQSLGATTLSREQFIQSLLSFKEKQVLSGCFETQWLATPTSPCA HHCCCCEEEEEECCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCC FED CCC >Mature Secondary Structure AIYLTELSPETLTFPSPFTALDDPNGLLAFGGDLRLERIWAAYQQGIFPWYGPEDPILW EEEEEECCCCEEECCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCEEE WSPSPRAVFDPTRFQPAKSVKKFQRKHQYRVSVNHATSQVIEQCALTRPADQRWLNDSMR ECCCCCCEECCCCCCHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHH HAYGELAKQGRCHSVEVWQGEQLVGGLYGISVGQLFCGESMFSLATNASKIALWYFCDHF HHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEHHHHHH SRHQGQLIDCQVMNPHLQSLGATTLSREQFIQSLLSFKEKQVLSGCFETQWLATPTSPCA HHCCCCEEEEEECCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCC FED CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA