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The map label for this gene is pspC [H]

Identifier: 227081827

GI number: 227081827

Start: 1758312

End: 1758728

Strand: Reverse

Name: pspC [H]

Synonym: VCM66_1616

Alternate gene names: 227081827

Gene position: 1758728-1758312 (Counterclockwise)

Preceding gene: 227081828

Following gene: 227081826

Centisome position: 60.8

GC content: 52.04

Gene sequence:

>417_bases
ATGAAACCCCAAACTGGAGAAATCGCTATGAGTAAACGCGAGCTGTACCGCGACCCATATAACGGCAAAATAGCGGGGGT
TTGTGCAGGGTTAGCGAATTACTTCGGCCTAGAGGTTTGGCTGGTGCGAATTTTAGTGATCACCGCAGCCTTGCTGGGTG
GGACGTTTTTAGTGCTGGTCGCTTATGTGGCCATGGCTCTGATGCTGGAGAAGCTACCGAAGCAGTACCGCGAAGATATT
CGTAGTCAGCAAGCGCATACGCTGAAAAGCAAACCTTGGGCACAAGGGCAAGCACCAAAAGAGCTGTTGCACACGCTAGA
TCGCGATCTCAGCCAAGTCGAGAGTCGAATTCGTGGTGTGGAGGCGTATGTCACCTCCGAAGCGTTTAAGGTCAACCGCG
AGTTTCGCAAACTCTAG

Upstream 100 bases:

>100_bases
GATGGTCTATCGGATGAGGAGCTGCAACTTCTGCGCACCCTGTCGGATAAGGCAAATCGCTTGCAAGACCGCGTGGAAAC
CTTAGAGCGGATCTTGGACG

Downstream 100 bases:

>100_bases
TCACCAGCGCCAATTACAAATCGTGGTGAATAGATAGGCGCGAGTTATTATTGAGCGGTATGAAATGCCGCTCTCACTTT
CGCTAATATTTGGTGAAAAA

Product: phage shock protein C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MKPQTGEIAMSKRELYRDPYNGKIAGVCAGLANYFGLEVWLVRILVITAALLGGTFLVLVAYVAMALMLEKLPKQYREDI
RSQQAHTLKSKPWAQGQAPKELLHTLDRDLSQVESRIRGVEAYVTSEAFKVNREFRKL

Sequences:

>Translated_138_residues
MKPQTGEIAMSKRELYRDPYNGKIAGVCAGLANYFGLEVWLVRILVITAALLGGTFLVLVAYVAMALMLEKLPKQYREDI
RSQQAHTLKSKPWAQGQAPKELLHTLDRDLSQVESRIRGVEAYVTSEAFKVNREFRKL
>Mature_138_residues
MKPQTGEIAMSKRELYRDPYNGKIAGVCAGLANYFGLEVWLVRILVITAALLGGTFLVLVAYVAMALMLEKLPKQYREDI
RSQQAHTLKSKPWAQGQAPKELLHTLDRDLSQVESRIRGVEAYVTSEAFKVNREFRKL

Specific function: The phage shock protein (psp) operon (pspABCDE) may play a significant role in the competition for survival under nutrient- or energy-limited conditions. PspC is involved in transcription regulation [H]

COG id: COG1983

COG function: function code KT; Putative stress-responsive transcriptional regulator

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PspC family [H]

Homologues:

Organism=Escherichia coli, GI1787564, Length=129, Percent_Identity=36.4341085271318, Blast_Score=86, Evalue=9e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007168
- InterPro:   IPR014320 [H]

Pfam domain/function: PF04024 PspC [H]

EC number: NA

Molecular weight: Translated: 15625; Mature: 15625

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPQTGEIAMSKRELYRDPYNGKIAGVCAGLANYFGLEVWLVRILVITAALLGGTFLVLV
CCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYVAMALMLEKLPKQYREDIRSQQAHTLKSKPWAQGQAPKELLHTLDRDLSQVESRIRGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
EAYVTSEAFKVNREFRKL
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKPQTGEIAMSKRELYRDPYNGKIAGVCAGLANYFGLEVWLVRILVITAALLGGTFLVLV
CCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYVAMALMLEKLPKQYREDIRSQQAHTLKSKPWAQGQAPKELLHTLDRDLSQVESRIRGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
EAYVTSEAFKVNREFRKL
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]