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The map label for this gene is vieA [H]

Identifier: 227081804

GI number: 227081804

Start: 1728111

End: 1729865

Strand: Reverse

Name: vieA [H]

Synonym: VCM66_1591

Alternate gene names: 227081804

Gene position: 1729865-1728111 (Counterclockwise)

Preceding gene: 227081805

Following gene: 227081803

Centisome position: 59.8

GC content: 46.89

Gene sequence:

>1755_bases
ATGAAAATAATGATAGTAGAAGATGATCGAATTCAGGCGACTAGCCTGAAGCTCAAGCTAAGACAGCTTGGGTTGGATGA
CGTCATCTTGGCTGAAAACGGATTTGCTGCCTTAGAACTGTGTAACAAAGTGGGTATCGATTTGATGTTTTGCGATATTC
GAATGCCGCAGATGGATGGGATCAGTTTGTTATCACAACTGAGTTTACAGGCACCTAAGCTAGGTGTGGTGATACTCAGC
GCTGTGGAAGATACGATTCTTGAGTTAACCCACAACATGTGTAGTTTGGCTGGATTTGCTTATGTTGATCGCCTACCTAA
GCCCTACGAAGTGGAGGATTTACAGCGTGTTGTCGAGGGGTTTCAAAAGCAAACGGAGCCCGAAACCAGTCACAAACCTG
CAATCACGCTAACCTGTGACGAGATTGAACAAGCTTTTCTGCACGACCATATTTTTAATTACTATCAACCACAGTTTGAT
TTTCGCAGTGGGGCGATGGTCGGCGTTGAAGCGCTAGTACGTTACGAGCACCCAACTCATGGCATGTTAAGCCCAGCAGT
GTTTCTGCCTTTAATTGAGCAGTGTGGCTTGCATGAGAAACTCTTCCTTACCGTATTAGAAAAGTCGGTCTCTGCACTGG
CCAGTATTGGTGCTGACTTGCAGCTTTCCGTCAACATCAGCCAGCGCAACTTGCAACACTCAATCTGTGATCCCATTCTC
GCCATCTGTGAGCGGTATGGTTTTCCCGCAAGCAAACTGACTCTAGAGATGACGGAGCATGAGGTGTACAACGGAACCCC
GACCTCATTGGCCAACCTTGCTCGACTGCGAATGTATGGCGTTGGGCTATCGATTGATGATTTTGGTACGGGTTACGCGT
CATTAGGTCAACTGGCTCAACTGCCTTTTACGGAACTCAAGATTGATCGCAGCTTTGTGCATGACTTGGCAACCAACTAC
AAACACCAACAATTGACCAATATGTGTTTGTTGCTGGCTCAATCTTTGGGGTTGCACTGCGTCGTCGAAGGGGTAGAGAA
CGAAGAAACATGGCAATACTTGCGTCAACTTGGGGTAGATACTTGCCAAGGTTACTACGCCGCTAAGCCCATGCCGATTG
CTCAGTTGAGCGAACTTTACACTAAAAATCGTCGTCAGTGTTTAGGTTGTCAAAGCATGGATGATGGCTGGCAAATCTTG
CTGGTGGATAACCATATGCTCAGCGCCACGGCATTACAAAAAGTGCTCAATAAAGAAGAGAACGTCAGCAAGGTGTTTGT
GGCGCAAGATATTGAGCAGACGCTGCACAAACTGCGCGATTTACCGATCAACCTGCTGGTCGTCGAAAGTCGGTTTTTAT
CGACAATCAGTCCTGCGGCATTTCACGAGTTGCTTGAGCCTTACTATCGAGGGGCGCTCTTGGTGCTGCATGATGGATTA
ACCGCTGAAGCTCAAGAGGATGAGCCCAAAGCCATCGTCGTCAAAGCGAATACTTTGATGGAAACCAGCTCCCGGATCTT
ACTGCAAGCGCAGCAGAGCAATGTGCGCCCACAGGCGCAACAAGAAGAGCTTGCTCAGCTTTCTGAGCGAGAGTTGACGG
TTGCGAAAATGTTAGTTGAAGGTCTAACGAATAAAGAAATCGCCTTACAACTCGATATCAACCAAAAAACAGTAAGCACT
TACAAGACTAGGATTATGACCAAGTTAGGGATTAAATCGGCCATGGAATTGGTGCGTTTTGTAACATTAAAATAG

Upstream 100 bases:

>100_bases
CAACAACTTGTGGCCGATAAGCAGCAACTGATCAATGCCATGCATGAAGTGGTCGAGCAGGCACAACAGTGGCTTCATCA
GTATCAGAGCGAATAACGTT

Downstream 100 bases:

>100_bases
TACCGAGAGTTATGGCTGTACCTACTTTTGCTGAATTAAAAGTTTTAATCATCGACGATGCGCCGATAGTCATTGCCAGT
TTACGCAGCATGTTGCTCAA

Product: response regulator VieA

Products: NA

Alternate protein names: Bacteriophytochrome cph2 [H]

Number of amino acids: Translated: 584; Mature: 584

Protein sequence:

>584_residues
MKIMIVEDDRIQATSLKLKLRQLGLDDVILAENGFAALELCNKVGIDLMFCDIRMPQMDGISLLSQLSLQAPKLGVVILS
AVEDTILELTHNMCSLAGFAYVDRLPKPYEVEDLQRVVEGFQKQTEPETSHKPAITLTCDEIEQAFLHDHIFNYYQPQFD
FRSGAMVGVEALVRYEHPTHGMLSPAVFLPLIEQCGLHEKLFLTVLEKSVSALASIGADLQLSVNISQRNLQHSICDPIL
AICERYGFPASKLTLEMTEHEVYNGTPTSLANLARLRMYGVGLSIDDFGTGYASLGQLAQLPFTELKIDRSFVHDLATNY
KHQQLTNMCLLLAQSLGLHCVVEGVENEETWQYLRQLGVDTCQGYYAAKPMPIAQLSELYTKNRRQCLGCQSMDDGWQIL
LVDNHMLSATALQKVLNKEENVSKVFVAQDIEQTLHKLRDLPINLLVVESRFLSTISPAAFHELLEPYYRGALLVLHDGL
TAEAQEDEPKAIVVKANTLMETSSRILLQAQQSNVRPQAQQEELAQLSERELTVAKMLVEGLTNKEIALQLDINQKTVST
YKTRIMTKLGIKSAMELVRFVTLK

Sequences:

>Translated_584_residues
MKIMIVEDDRIQATSLKLKLRQLGLDDVILAENGFAALELCNKVGIDLMFCDIRMPQMDGISLLSQLSLQAPKLGVVILS
AVEDTILELTHNMCSLAGFAYVDRLPKPYEVEDLQRVVEGFQKQTEPETSHKPAITLTCDEIEQAFLHDHIFNYYQPQFD
FRSGAMVGVEALVRYEHPTHGMLSPAVFLPLIEQCGLHEKLFLTVLEKSVSALASIGADLQLSVNISQRNLQHSICDPIL
AICERYGFPASKLTLEMTEHEVYNGTPTSLANLARLRMYGVGLSIDDFGTGYASLGQLAQLPFTELKIDRSFVHDLATNY
KHQQLTNMCLLLAQSLGLHCVVEGVENEETWQYLRQLGVDTCQGYYAAKPMPIAQLSELYTKNRRQCLGCQSMDDGWQIL
LVDNHMLSATALQKVLNKEENVSKVFVAQDIEQTLHKLRDLPINLLVVESRFLSTISPAAFHELLEPYYRGALLVLHDGL
TAEAQEDEPKAIVVKANTLMETSSRILLQAQQSNVRPQAQQEELAQLSERELTVAKMLVEGLTNKEIALQLDINQKTVST
YKTRIMTKLGIKSAMELVRFVTLK
>Mature_584_residues
MKIMIVEDDRIQATSLKLKLRQLGLDDVILAENGFAALELCNKVGIDLMFCDIRMPQMDGISLLSQLSLQAPKLGVVILS
AVEDTILELTHNMCSLAGFAYVDRLPKPYEVEDLQRVVEGFQKQTEPETSHKPAITLTCDEIEQAFLHDHIFNYYQPQFD
FRSGAMVGVEALVRYEHPTHGMLSPAVFLPLIEQCGLHEKLFLTVLEKSVSALASIGADLQLSVNISQRNLQHSICDPIL
AICERYGFPASKLTLEMTEHEVYNGTPTSLANLARLRMYGVGLSIDDFGTGYASLGQLAQLPFTELKIDRSFVHDLATNY
KHQQLTNMCLLLAQSLGLHCVVEGVENEETWQYLRQLGVDTCQGYYAAKPMPIAQLSELYTKNRRQCLGCQSMDDGWQIL
LVDNHMLSATALQKVLNKEENVSKVFVAQDIEQTLHKLRDLPINLLVVESRFLSTISPAAFHELLEPYYRGALLVLHDGL
TAEAQEDEPKAIVVKANTLMETSSRILLQAQQSNVRPQAQQEELAQLSERELTVAKMLVEGLTNKEIALQLDINQKTVST
YKTRIMTKLGIKSAMELVRFVTLK

Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 GGDEF domains [H]

Homologues:

Organism=Escherichia coli, GI87081921, Length=231, Percent_Identity=35.0649350649351, Blast_Score=138, Evalue=1e-33,
Organism=Escherichia coli, GI1790496, Length=226, Percent_Identity=36.283185840708, Blast_Score=130, Evalue=3e-31,
Organism=Escherichia coli, GI1787541, Length=261, Percent_Identity=30.6513409961686, Blast_Score=129, Evalue=4e-31,
Organism=Escherichia coli, GI226510982, Length=246, Percent_Identity=36.1788617886179, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI87081845, Length=256, Percent_Identity=31.25, Blast_Score=117, Evalue=3e-27,
Organism=Escherichia coli, GI87081980, Length=233, Percent_Identity=31.7596566523605, Blast_Score=115, Evalue=6e-27,
Organism=Escherichia coli, GI87081743, Length=226, Percent_Identity=33.6283185840708, Blast_Score=111, Evalue=2e-25,
Organism=Escherichia coli, GI1786507, Length=232, Percent_Identity=31.0344827586207, Blast_Score=110, Evalue=3e-25,
Organism=Escherichia coli, GI87082096, Length=209, Percent_Identity=34.4497607655502, Blast_Score=108, Evalue=1e-24,
Organism=Escherichia coli, GI1787055, Length=232, Percent_Identity=30.1724137931034, Blast_Score=103, Evalue=3e-23,
Organism=Escherichia coli, GI1788849, Length=238, Percent_Identity=30.2521008403361, Blast_Score=102, Evalue=8e-23,
Organism=Escherichia coli, GI1788502, Length=241, Percent_Identity=29.045643153527, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1790437, Length=139, Percent_Identity=32.3741007194245, Blast_Score=63, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR003018
- InterPro:   IPR016132
- InterPro:   IPR001294
- InterPro:   IPR013515 [H]

Pfam domain/function: PF00563 EAL; PF01590 GAF; PF00990 GGDEF; PF00360 Phytochrome [H]

EC number: NA

Molecular weight: Translated: 65466; Mature: 65466

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2 ; PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIMIVEDDRIQATSLKLKLRQLGLDDVILAENGFAALELCNKVGIDLMFCDIRMPQMDG
CEEEEEECCCEEHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCCEEEEEECCCCCCCH
ISLLSQLSLQAPKLGVVILSAVEDTILELTHNMCSLAGFAYVDRLPKPYEVEDLQRVVEG
HHHHHHHHCCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
FQKQTEPETSHKPAITLTCDEIEQAFLHDHIFNYYQPQFDFRSGAMVGVEALVRYEHPTH
HHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCC
GMLSPAVFLPLIEQCGLHEKLFLTVLEKSVSALASIGADLQLSVNISQRNLQHSICDPIL
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHH
AICERYGFPASKLTLEMTEHEVYNGTPTSLANLARLRMYGVGLSIDDFGTGYASLGQLAQ
HHHHHHCCCHHHEEEEEEHHHHCCCCHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHH
LPFTELKIDRSFVHDLATNYKHQQLTNMCLLLAQSLGLHCVVEGVENEETWQYLRQLGVD
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCH
TCQGYYAAKPMPIAQLSELYTKNRRQCLGCQSMDDGWQILLVDNHMLSATALQKVLNKEE
HHCCEECCCCCCHHHHHHHHHCCHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCC
NVSKVFVAQDIEQTLHKLRDLPINLLVVESRFLSTISPAAFHELLEPYYRGALLVLHDGL
CHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHCCHHHHHHHHHHHHCCEEEEEECCC
TAEAQEDEPKAIVVKANTLMETSSRILLQAQQSNVRPQAQQEELAQLSERELTVAKMLVE
CCCCCCCCCCEEEEEECHHHHCCCHHEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
GLTNKEIALQLDINQKTVSTYKTRIMTKLGIKSAMELVRFVTLK
CCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKIMIVEDDRIQATSLKLKLRQLGLDDVILAENGFAALELCNKVGIDLMFCDIRMPQMDG
CEEEEEECCCEEHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCCEEEEEECCCCCCCH
ISLLSQLSLQAPKLGVVILSAVEDTILELTHNMCSLAGFAYVDRLPKPYEVEDLQRVVEG
HHHHHHHHCCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
FQKQTEPETSHKPAITLTCDEIEQAFLHDHIFNYYQPQFDFRSGAMVGVEALVRYEHPTH
HHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCC
GMLSPAVFLPLIEQCGLHEKLFLTVLEKSVSALASIGADLQLSVNISQRNLQHSICDPIL
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHH
AICERYGFPASKLTLEMTEHEVYNGTPTSLANLARLRMYGVGLSIDDFGTGYASLGQLAQ
HHHHHHCCCHHHEEEEEEHHHHCCCCHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHH
LPFTELKIDRSFVHDLATNYKHQQLTNMCLLLAQSLGLHCVVEGVENEETWQYLRQLGVD
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCH
TCQGYYAAKPMPIAQLSELYTKNRRQCLGCQSMDDGWQILLVDNHMLSATALQKVLNKEE
HHCCEECCCCCCHHHHHHHHHCCHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCC
NVSKVFVAQDIEQTLHKLRDLPINLLVVESRFLSTISPAAFHELLEPYYRGALLVLHDGL
CHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHCCHHHHHHHHHHHHCCEEEEEECCC
TAEAQEDEPKAIVVKANTLMETSSRILLQAQQSNVRPQAQQEELAQLSERELTVAKMLVE
CCCCCCCCCCEEEEEECHHHHCCCHHEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
GLTNKEIALQLDINQKTVSTYKTRIMTKLGIKSAMELVRFVTLK
CCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231; 10978170; 11063585 [H]