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The map label for this gene is vcc

Identifier: 227081802

GI number: 227081802

Start: 1723948

End: 1726404

Strand: Direct

Name: vcc

Synonym: VCM66_1589

Alternate gene names: 227081802

Gene position: 1723948-1726404 (Clockwise)

Preceding gene: 227081800

Following gene: 227081806

Centisome position: 59.6

GC content: 48.03

Gene sequence:

>2457_bases
GTGTCTTTTCAACAACGTATCCAACATCACCCCATTGCTTGGGCGTGCGTCATCGCTGGTCTTTCTTACTCCTCCTATTC
ACAAGCAGCTTGTGAGATACAAGATTTACAGCCCGCGCGCGATCTTCCTGCGCAAATTGCCGTGGCTACACAAGCTTGTT
ACAACTCATGGTTTTACGCACCAACGGCAACCTTGGATAACCTCTATAGCGAAGCTTCTCTAGCGCATTTACAAACTGTG
CTCGATGCTGAAATTGCTCGCTATACTGGTGAAGCGCAGCAAGCTCGTCGCTTGGAAAACTATGGTGAGTTCATTCGCGC
AGCGTATTACGTGCGTTATAACGCTGGGCGTGAACCTTATTCTCAAGCACTCAGTCAACGCTTTGCTCAATCGATCGACC
GCTTTTTACGTCATCCGCATGCTTTTGACCAAGGCCGTGAACAGGTGGGCGCAATGAAGAGCCTAAGTTTAATGGTGGAT
AACGTTAAGCAGTTACCGCTCACTATGGATGCGATGATCTTAGCTCTGCACCGCTTCAATCGAGAAACGGCGCAAGATAC
ACAATGGGTCGATGGTTTAAATAACTTATTCCGTGCGATGTCTGGCCATGTGGGTAACTCGGAGTTTTACCGCTACTTAG
CCGCCAACACTCAACATATTGATACCTTGTATCGATTCGCTCTGGACAATGAGTGGGCATTAGAAACCGACGCTGAGTTT
TTGGTTTACAACGCTCTGCGTGAAACTGGCCGCTTATTGATTAGCCCAGATGCCATTACCAAGCAAAAGGCTCGTCATGT
GATGCGACAAGTGATTGCTCGCTATCCTTTAGGGAGTAAACACGACAAATTGTGGTTAGCTGCCGTTGAGATGTTGCATT
ATTACGCACCTGAGGTGCTGCAACAGCTCGGTATCGATCTTGATGCAGCGAAGCGCGATTTAGCCGCGCGCATTTTGCCA
AACCGCTTTGAATGCCAAGGCCCTGCCATTATTCGCTCGCAAGATCTTTCCGATGCGCAAGCCGCGCAAGCCTGTGACGT
ATTGGATAAAAAAGAGCAAGATTTTCACCAAGTGGCAAATACGGGATTGGCACCGGTCGCTGATGATTACAACACTCGCG
TTGAGGTGGTGGTGTTTGCCAATAACAGCAGCTATGTCAATTACTCCTCGTTTTTATTTGGCAATACCACCGACAATGGC
GGGCAGTATTTAGAAGGCAACCCTGCGGATCAAAACAATCAAGCCCGTTTTGTCGCCTATCGTTATGCCAATGATGCGGA
TTTGTCGATTCTCAATTTAGAGCATGAGTACACTCATTATCTGGACGCGCGCTTCAACCAGTATGGTTCGTTCAGTGATA
ACTTAGCCCATGGTCATATTGTGTGGTGGTTAGAAGGTTTCGCGGAATATATGCATTATAAGCAGGGCTACCAAGCGGCG
GTTAAGCTGATTTCTCAAGGTAAATTGAGCCTTTCTGATGTGTTTGCCACCACCTACTCGAATGATACGAACCGCATTTA
TCGCTGGGGCTACTTAGCGGTACGCTTTATGTTGGAAAAGCATCCACAAGACGTGGAAAGCTTGCTGGCACTCTCTCGTA
CTGGGCAGTTTGATCAGTGGGCACAGAGTGTCAAATTACTGGGTGAACGCTATAACACCGAGTTTTCGGCGTGGCTGGAT
ACATTGCAACGCGATAATCCAGATAATCCAGATAATCCAGATAATCCAGATAATCCAGATAATCCAGATAATCCAGAACA
GCCTAACCCAGAACCCAATGCGGTCACTCAGTTAGCGGCCAATTCGTCCTTAACACTGACAGGAAAGGCGTACAGCGAGC
ATCTGTTCTATGTGGATGTGCCAGAGTACAGCCGAGAGTTCCACGTTCAGATCTCCGGGGAGGGAGATGCCGATCTGTAC
ATGAGCTACCAGCAGGTTGCCCATTACTATGATTATCAGGTAACGGAATTTACCTATGGCAGCAACGAGCAAATTACCTT
CAAACCTGAGCAGAATGGTTACATCAAACCCGGACGCTACTATTTAAGTGTGACAGGACGTGCGGATTACTCAGCAGTCA
TCCTCAACACACACCTAGTCACTGAACAGCCTAATGAGCAACCGACTATCAAAGATGATCTTGCTCCTGTGCTTTTAGAA
GCGGGTAACAGTCAAAGCCTTACCGTGCATCGACAACGTTACGTCGCCATCTACGTGCCAAAAGGCGTCAGTGAAGTACA
AGTATGGCTCACCGCTTCAGAACAAAACCGAGGCAATGTCGATCTGTTTGCAGCAAAAGCGTATTGGCCAACTCGAGAGC
AGTTTGAGCACGCCTCAACTGGTGCGGGCAGTCATGAGTATTTGCGTATTCCTGTGACACAAGAAGGCTATGTGCACTTT
TCGTTAAACGCACAACAACTCGGCGACACGGTCGAAATGGTGGCCTATTTCGACTGA

Upstream 100 bases:

>100_bases
TTGAATAAGCCTCATAATTCATACGCATCAGATTTTATTGAAACCAAGAAAGACCTTATAAACCACAGCCCAAATATATT
CATCATAAATAGGTTTTGCA

Downstream 100 bases:

>100_bases
TGATACGGCGTAATCGTCCTCTGTAGAGGGCGGTTACGCCTCAACTGATTCGGTTCGCTGTAAACGATAGCGACTACGAA
AAGTGAGTGCTTTTCGATAC

Product: collagenase

Products: NA

Alternate protein names: Exoprotease Vcc

Number of amino acids: Translated: 818; Mature: 817

Protein sequence:

>818_residues
MSFQQRIQHHPIAWACVIAGLSYSSYSQAACEIQDLQPARDLPAQIAVATQACYNSWFYAPTATLDNLYSEASLAHLQTV
LDAEIARYTGEAQQARRLENYGEFIRAAYYVRYNAGREPYSQALSQRFAQSIDRFLRHPHAFDQGREQVGAMKSLSLMVD
NVKQLPLTMDAMILALHRFNRETAQDTQWVDGLNNLFRAMSGHVGNSEFYRYLAANTQHIDTLYRFALDNEWALETDAEF
LVYNALRETGRLLISPDAITKQKARHVMRQVIARYPLGSKHDKLWLAAVEMLHYYAPEVLQQLGIDLDAAKRDLAARILP
NRFECQGPAIIRSQDLSDAQAAQACDVLDKKEQDFHQVANTGLAPVADDYNTRVEVVVFANNSSYVNYSSFLFGNTTDNG
GQYLEGNPADQNNQARFVAYRYANDADLSILNLEHEYTHYLDARFNQYGSFSDNLAHGHIVWWLEGFAEYMHYKQGYQAA
VKLISQGKLSLSDVFATTYSNDTNRIYRWGYLAVRFMLEKHPQDVESLLALSRTGQFDQWAQSVKLLGERYNTEFSAWLD
TLQRDNPDNPDNPDNPDNPDNPDNPEQPNPEPNAVTQLAANSSLTLTGKAYSEHLFYVDVPEYSREFHVQISGEGDADLY
MSYQQVAHYYDYQVTEFTYGSNEQITFKPEQNGYIKPGRYYLSVTGRADYSAVILNTHLVTEQPNEQPTIKDDLAPVLLE
AGNSQSLTVHRQRYVAIYVPKGVSEVQVWLTASEQNRGNVDLFAAKAYWPTREQFEHASTGAGSHEYLRIPVTQEGYVHF
SLNAQQLGDTVEMVAYFD

Sequences:

>Translated_818_residues
MSFQQRIQHHPIAWACVIAGLSYSSYSQAACEIQDLQPARDLPAQIAVATQACYNSWFYAPTATLDNLYSEASLAHLQTV
LDAEIARYTGEAQQARRLENYGEFIRAAYYVRYNAGREPYSQALSQRFAQSIDRFLRHPHAFDQGREQVGAMKSLSLMVD
NVKQLPLTMDAMILALHRFNRETAQDTQWVDGLNNLFRAMSGHVGNSEFYRYLAANTQHIDTLYRFALDNEWALETDAEF
LVYNALRETGRLLISPDAITKQKARHVMRQVIARYPLGSKHDKLWLAAVEMLHYYAPEVLQQLGIDLDAAKRDLAARILP
NRFECQGPAIIRSQDLSDAQAAQACDVLDKKEQDFHQVANTGLAPVADDYNTRVEVVVFANNSSYVNYSSFLFGNTTDNG
GQYLEGNPADQNNQARFVAYRYANDADLSILNLEHEYTHYLDARFNQYGSFSDNLAHGHIVWWLEGFAEYMHYKQGYQAA
VKLISQGKLSLSDVFATTYSNDTNRIYRWGYLAVRFMLEKHPQDVESLLALSRTGQFDQWAQSVKLLGERYNTEFSAWLD
TLQRDNPDNPDNPDNPDNPDNPDNPEQPNPEPNAVTQLAANSSLTLTGKAYSEHLFYVDVPEYSREFHVQISGEGDADLY
MSYQQVAHYYDYQVTEFTYGSNEQITFKPEQNGYIKPGRYYLSVTGRADYSAVILNTHLVTEQPNEQPTIKDDLAPVLLE
AGNSQSLTVHRQRYVAIYVPKGVSEVQVWLTASEQNRGNVDLFAAKAYWPTREQFEHASTGAGSHEYLRIPVTQEGYVHF
SLNAQQLGDTVEMVAYFD
>Mature_817_residues
SFQQRIQHHPIAWACVIAGLSYSSYSQAACEIQDLQPARDLPAQIAVATQACYNSWFYAPTATLDNLYSEASLAHLQTVL
DAEIARYTGEAQQARRLENYGEFIRAAYYVRYNAGREPYSQALSQRFAQSIDRFLRHPHAFDQGREQVGAMKSLSLMVDN
VKQLPLTMDAMILALHRFNRETAQDTQWVDGLNNLFRAMSGHVGNSEFYRYLAANTQHIDTLYRFALDNEWALETDAEFL
VYNALRETGRLLISPDAITKQKARHVMRQVIARYPLGSKHDKLWLAAVEMLHYYAPEVLQQLGIDLDAAKRDLAARILPN
RFECQGPAIIRSQDLSDAQAAQACDVLDKKEQDFHQVANTGLAPVADDYNTRVEVVVFANNSSYVNYSSFLFGNTTDNGG
QYLEGNPADQNNQARFVAYRYANDADLSILNLEHEYTHYLDARFNQYGSFSDNLAHGHIVWWLEGFAEYMHYKQGYQAAV
KLISQGKLSLSDVFATTYSNDTNRIYRWGYLAVRFMLEKHPQDVESLLALSRTGQFDQWAQSVKLLGERYNTEFSAWLDT
LQRDNPDNPDNPDNPDNPDNPDNPEQPNPEPNAVTQLAANSSLTLTGKAYSEHLFYVDVPEYSREFHVQISGEGDADLYM
SYQQVAHYYDYQVTEFTYGSNEQITFKPEQNGYIKPGRYYLSVTGRADYSAVILNTHLVTEQPNEQPTIKDDLAPVLLEA
GNSQSLTVHRQRYVAIYVPKGVSEVQVWLTASEQNRGNVDLFAAKAYWPTREQFEHASTGAGSHEYLRIPVTQEGYVHFS
LNAQQLGDTVEMVAYFD

Specific function: Possesses gelatinolytic activity

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M9A family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): COLA_VIBCH (Q9KRJ0)

Other databases:

- EMBL:   AF109145
- EMBL:   AE003852
- PIR:   F82173
- RefSeq:   NP_231287.1
- MEROPS:   M09.004
- GeneID:   2613781
- GenomeReviews:   AE003852_GR
- KEGG:   vch:VC1650
- TIGR:   VC_1650
- HOGENOM:   HBG739576
- OMA:   ETHDINC
- ProtClustDB:   CLSK874477
- BRENDA:   3.4.24.3
- GO:   GO:0006508
- InterPro:   IPR013510
- InterPro:   IPR007280
- InterPro:   IPR002169
- InterPro:   IPR013661
- PRINTS:   PR00931

Pfam domain/function: PF01752 Peptidase_M9; PF08453 Peptidase_M9_N; PF04151 PPC

EC number: =3.4.24.3

Molecular weight: Translated: 92998; Mature: 92867

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: ACT_SITE 436-436

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFQQRIQHHPIAWACVIAGLSYSSYSQAACEIQDLQPARDLPAQIAVATQACYNSWFYA
CCHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCEECC
PTATLDNLYSEASLAHLQTVLDAEIARYTGEAQQARRLENYGEFIRAAYYVRYNAGREPY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEEEECCCCCHH
SQALSQRFAQSIDRFLRHPHAFDQGREQVGAMKSLSLMVDNVKQLPLTMDAMILALHRFN
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
RETAQDTQWVDGLNNLFRAMSGHVGNSEFYRYLAANTQHIDTLYRFALDNEWALETDAEF
CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHH
LVYNALRETGRLLISPDAITKQKARHVMRQVIARYPLGSKHDKLWLAAVEMLHYYAPEVL
HHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
QQLGIDLDAAKRDLAARILPNRFECQGPAIIRSQDLSDAQAAQACDVLDKKEQDFHQVAN
HHHCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHH
TGLAPVADDYNTRVEVVVFANNSSYVNYSSFLFGNTTDNGGQYLEGNPADQNNQARFVAY
CCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEE
RYANDADLSILNLEHEYTHYLDARFNQYGSFSDNLAHGHIVWWLEGFAEYMHYKQGYQAA
EECCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHH
VKLISQGKLSLSDVFATTYSNDTNRIYRWGYLAVRFMLEKHPQDVESLLALSRTGQFDQW
HHHHHCCCCCHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHH
AQSVKLLGERYNTEFSAWLDTLQRDNPDNPDNPDNPDNPDNPDNPEQPNPEPNAVTQLAA
HHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHC
NSSLTLTGKAYSEHLFYVDVPEYSREFHVQISGEGDADLYMSYQQVAHYYDYQVTEFTYG
CCCEEEEECCCCCEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEEEC
SNEQITFKPEQNGYIKPGRYYLSVTGRADYSAVILNTHLVTEQPNEQPTIKDDLAPVLLE
CCCEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHC
AGNSQSLTVHRQRYVAIYVPKGVSEVQVWLTASEQNRGNVDLFAAKAYWPTREQFEHAST
CCCCCCEEEEEEEEEEEEECCCCCEEEEEEEECCCCCCCEEEEEEECCCCCHHHHHHCCC
GAGSHEYLRIPVTQEGYVHFSLNAQQLGDTVEMVAYFD
CCCCCCEEEEEECCCCEEEEEECHHHHCCHHHEEEECC
>Mature Secondary Structure 
SFQQRIQHHPIAWACVIAGLSYSSYSQAACEIQDLQPARDLPAQIAVATQACYNSWFYA
CHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCEECC
PTATLDNLYSEASLAHLQTVLDAEIARYTGEAQQARRLENYGEFIRAAYYVRYNAGREPY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEEEECCCCCHH
SQALSQRFAQSIDRFLRHPHAFDQGREQVGAMKSLSLMVDNVKQLPLTMDAMILALHRFN
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
RETAQDTQWVDGLNNLFRAMSGHVGNSEFYRYLAANTQHIDTLYRFALDNEWALETDAEF
CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHH
LVYNALRETGRLLISPDAITKQKARHVMRQVIARYPLGSKHDKLWLAAVEMLHYYAPEVL
HHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
QQLGIDLDAAKRDLAARILPNRFECQGPAIIRSQDLSDAQAAQACDVLDKKEQDFHQVAN
HHHCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHH
TGLAPVADDYNTRVEVVVFANNSSYVNYSSFLFGNTTDNGGQYLEGNPADQNNQARFVAY
CCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEE
RYANDADLSILNLEHEYTHYLDARFNQYGSFSDNLAHGHIVWWLEGFAEYMHYKQGYQAA
EECCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHH
VKLISQGKLSLSDVFATTYSNDTNRIYRWGYLAVRFMLEKHPQDVESLLALSRTGQFDQW
HHHHHCCCCCHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHH
AQSVKLLGERYNTEFSAWLDTLQRDNPDNPDNPDNPDNPDNPDNPEQPNPEPNAVTQLAA
HHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHC
NSSLTLTGKAYSEHLFYVDVPEYSREFHVQISGEGDADLYMSYQQVAHYYDYQVTEFTYG
CCCEEEEECCCCCEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEEEC
SNEQITFKPEQNGYIKPGRYYLSVTGRADYSAVILNTHLVTEQPNEQPTIKDDLAPVLLE
CCCEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHC
AGNSQSLTVHRQRYVAIYVPKGVSEVQVWLTASEQNRGNVDLFAAKAYWPTREQFEHAST
CCCCCCEEEEEEEEEEEEECCCCCEEEEEEEECCCCCCCEEEEEEECCCCCHHHHHHCCC
GAGSHEYLRIPVTQEGYVHFSLNAQQLGDTVEMVAYFD
CCCCCCEEEEEECCCCEEEEEECHHHHCCHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10952301