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The map label for this gene is ybjT [H]

Identifier: 227081784

GI number: 227081784

Start: 1704426

End: 1705862

Strand: Direct

Name: ybjT [H]

Synonym: VCM66_1571

Alternate gene names: 227081784

Gene position: 1704426-1705862 (Clockwise)

Preceding gene: 227081775

Following gene: 227081788

Centisome position: 58.93

GC content: 51.01

Gene sequence:

>1437_bases
ATGAAAAAGGTATTAGTGTTAGGTGCATCAGGTTATGTAGGGGCGCAGTTGCTGCCACTGCTACTGAATGCGGGATACCA
TACCACGGCCGCCTCTCGTCATATCGAGACATTGCATGCGCGCTTGCCCACTCATCCCAACTTAACTCGGCTCACTCTGG
ATTTAGCGGATCGTCAGAAAACGCTCGCCACCATCCCCAATTATGATTTGGTCTTTTTCTTAGTTCATGGCATGGCGCAT
GGTGGGGATTTTGTCGATTACGAGCTTTCATTGGCACAAAACGTAAATGACGCGCTCGATCTTGCGCATAGCCAAGTACA
ACATGTGATCTATTTAAGCTCGCTACAACCGGAGTCTGGTCGCTCCCCTCATTTACAAGCGCGTTACGCTACTGGGCAGA
TACTGCGCCAGTCACGGATCCCGATAACGGAGCTGAGAGCGGGGGTTATCATCGGCCCTGGCTCGGCTGCATTCGAAATC
ATGCGCGATTTTGTCTACAACTTGCCAGTACTCATTACGCCTAAATGGGTTGACTCCCAAGCCAATCCGATTGCTCTGGC
TAATCTCAACACCTATTTACTGAAATTTGCCGAAGAGCAGCCAAAGATGCATCAGACGTTTGAGCTTGGCGGGCCTGATA
TTCTCAGCTATCGCGAACAGTTTCAGATTCTGTGTGAATTGACTGGGAAACCCTATCGCTTATGGTCGACGCGCTTTCTC
ACTCCAAGCATGGCTGCACGCTGGCTCGGTATGGTGACATCGGTGCCAAGCTCGATTGGACGCTCGCTGCTGGAAGGGTT
AACACATGATTTTATTGCCGACACCCAAGCGATTGAAGCACGCTATCCACAGCCTTTGATCGCCTATCGAGAAGCGGTCA
AAGCGGCGATCAGCAGTGAAGGAACCTTTGTGCGTAGCCAAGTATGGGGATTTGACCCTCACGCCATTGTCCGTTGGCAA
CCGGGTTTTGGTTATTACCCCAAGCAAGCGGGGGCCAGCATCGAAACCGAGTTAAGCAGCCATGCGCTGTGGAAAGTCAT
CCGCACTATAGGCCGCCGCGATCAAGGGTATTTTTTTGCCAATATTCTGTGGCGTACTCGTGAATGGTTGGATGTGCTGT
TTGGTGGTGGCAAACCGATTCGTCGCTATCCCGCTGGCGCTGAACTCGCAGTGGGAGATTATATCGACTCTTGGAAGGTG
ATCCGCTGCCAACCGCAGCAGTTTTTGTCCTTACTGTTTGGTATGAAAGGCCCGGGGCTAGGACGTTTGGAATTTACCAT
CGATGATTTGGGCGATAAGCGACGCCTGAATGTAACGGCGTGGTGGCATCCACAAGGTTTTCTCGGCTTGATGTACTGGT
ATGCCATGATGCCAGCGCATCTGTTTATCTTTCGTGGCATGGTAAAAGCCATCATAAAAAAATCCCGCCGAGATTAA

Upstream 100 bases:

>100_bases
CTATTACCTGTTAAGGTTAAGGACAGAGTAGGCAGAAAAAACAGCCGCTATTATACTCACGCACGCATAAGCACAACAAA
CGATTAAAAAGGACCGTCGG

Downstream 100 bases:

>100_bases
GCGACGGGATGAGCTTTTCCTGCAGTCAGGCTTTTGAGCGCCGTTTTTCAAACTGATCTAACTGAGCTAGTTAGCACGAA
AAGAAATCGGAATTTCCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 478; Mature: 478

Protein sequence:

>478_residues
MKKVLVLGASGYVGAQLLPLLLNAGYHTTAASRHIETLHARLPTHPNLTRLTLDLADRQKTLATIPNYDLVFFLVHGMAH
GGDFVDYELSLAQNVNDALDLAHSQVQHVIYLSSLQPESGRSPHLQARYATGQILRQSRIPITELRAGVIIGPGSAAFEI
MRDFVYNLPVLITPKWVDSQANPIALANLNTYLLKFAEEQPKMHQTFELGGPDILSYREQFQILCELTGKPYRLWSTRFL
TPSMAARWLGMVTSVPSSIGRSLLEGLTHDFIADTQAIEARYPQPLIAYREAVKAAISSEGTFVRSQVWGFDPHAIVRWQ
PGFGYYPKQAGASIETELSSHALWKVIRTIGRRDQGYFFANILWRTREWLDVLFGGGKPIRRYPAGAELAVGDYIDSWKV
IRCQPQQFLSLLFGMKGPGLGRLEFTIDDLGDKRRLNVTAWWHPQGFLGLMYWYAMMPAHLFIFRGMVKAIIKKSRRD

Sequences:

>Translated_478_residues
MKKVLVLGASGYVGAQLLPLLLNAGYHTTAASRHIETLHARLPTHPNLTRLTLDLADRQKTLATIPNYDLVFFLVHGMAH
GGDFVDYELSLAQNVNDALDLAHSQVQHVIYLSSLQPESGRSPHLQARYATGQILRQSRIPITELRAGVIIGPGSAAFEI
MRDFVYNLPVLITPKWVDSQANPIALANLNTYLLKFAEEQPKMHQTFELGGPDILSYREQFQILCELTGKPYRLWSTRFL
TPSMAARWLGMVTSVPSSIGRSLLEGLTHDFIADTQAIEARYPQPLIAYREAVKAAISSEGTFVRSQVWGFDPHAIVRWQ
PGFGYYPKQAGASIETELSSHALWKVIRTIGRRDQGYFFANILWRTREWLDVLFGGGKPIRRYPAGAELAVGDYIDSWKV
IRCQPQQFLSLLFGMKGPGLGRLEFTIDDLGDKRRLNVTAWWHPQGFLGLMYWYAMMPAHLFIFRGMVKAIIKKSRRD
>Mature_478_residues
MKKVLVLGASGYVGAQLLPLLLNAGYHTTAASRHIETLHARLPTHPNLTRLTLDLADRQKTLATIPNYDLVFFLVHGMAH
GGDFVDYELSLAQNVNDALDLAHSQVQHVIYLSSLQPESGRSPHLQARYATGQILRQSRIPITELRAGVIIGPGSAAFEI
MRDFVYNLPVLITPKWVDSQANPIALANLNTYLLKFAEEQPKMHQTFELGGPDILSYREQFQILCELTGKPYRLWSTRFL
TPSMAARWLGMVTSVPSSIGRSLLEGLTHDFIADTQAIEARYPQPLIAYREAVKAAISSEGTFVRSQVWGFDPHAIVRWQ
PGFGYYPKQAGASIETELSSHALWKVIRTIGRRDQGYFFANILWRTREWLDVLFGGGKPIRRYPAGAELAVGDYIDSWKV
IRCQPQQFLSLLFGMKGPGLGRLEFTIDDLGDKRRLNVTAWWHPQGFLGLMYWYAMMPAHLFIFRGMVKAIIKKSRRD

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081793, Length=483, Percent_Identity=46.583850931677, Blast_Score=422, Evalue=1e-119,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021295
- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF11066 DUF2867; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 53922; Mature: 53922

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVLVLGASGYVGAQLLPLLLNAGYHTTAASRHIETLHARLPTHPNLTRLTLDLADRQK
CCEEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEHHHCHH
TLATIPNYDLVFFLVHGMAHGGDFVDYELSLAQNVNDALDLAHSQVQHVIYLSSLQPESG
HHHCCCCCHHHHHHHHHHCCCCCEEEEEHHHHHCCHHHHHHHHHHHHHEEEEECCCCCCC
RSPHLQARYATGQILRQSRIPITELRAGVIIGPGSAAFEIMRDFVYNLPVLITPKWVDSQ
CCCCEEEEHHHHHHHHHCCCCHHHHCCCEEECCCHHHHHHHHHHHHCCCEEEECCCCCCC
ANPIALANLNTYLLKFAEEQPKMHQTFELGGPDILSYREQFQILCELTGKPYRLWSTRFL
CCCEEEECHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECC
TPSMAARWLGMVTSVPSSIGRSLLEGLTHDFIADTQAIEARYPQPLIAYREAVKAAISSE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHHCCC
GTFVRSQVWGFDPHAIVRWQPGFGYYPKQAGASIETELSSHALWKVIRTIGRRDQGYFFA
CCEEEHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEE
NILWRTREWLDVLFGGGKPIRRYPAGAELAVGDYIDSWKVIRCQPQQFLSLLFGMKGPGL
HHHHHHHHHHHHHHCCCCCHHCCCCCCCEEECCCCCCCEEEEECHHHHHHHHHCCCCCCC
GRLEFTIDDLGDKRRLNVTAWWHPQGFLGLMYWYAMMPAHLFIFRGMVKAIIKKSRRD
CEEEEEEECCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKVLVLGASGYVGAQLLPLLLNAGYHTTAASRHIETLHARLPTHPNLTRLTLDLADRQK
CCEEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEHHHCHH
TLATIPNYDLVFFLVHGMAHGGDFVDYELSLAQNVNDALDLAHSQVQHVIYLSSLQPESG
HHHCCCCCHHHHHHHHHHCCCCCEEEEEHHHHHCCHHHHHHHHHHHHHEEEEECCCCCCC
RSPHLQARYATGQILRQSRIPITELRAGVIIGPGSAAFEIMRDFVYNLPVLITPKWVDSQ
CCCCEEEEHHHHHHHHHCCCCHHHHCCCEEECCCHHHHHHHHHHHHCCCEEEECCCCCCC
ANPIALANLNTYLLKFAEEQPKMHQTFELGGPDILSYREQFQILCELTGKPYRLWSTRFL
CCCEEEECHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECC
TPSMAARWLGMVTSVPSSIGRSLLEGLTHDFIADTQAIEARYPQPLIAYREAVKAAISSE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHHCCC
GTFVRSQVWGFDPHAIVRWQPGFGYYPKQAGASIETELSSHALWKVIRTIGRRDQGYFFA
CCEEEHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEE
NILWRTREWLDVLFGGGKPIRRYPAGAELAVGDYIDSWKVIRCQPQQFLSLLFGMKGPGL
HHHHHHHHHHHHHHCCCCCHHCCCCCCCEEECCCCCCCEEEEECHHHHHHHHHCCCCCCC
GRLEFTIDDLGDKRRLNVTAWWHPQGFLGLMYWYAMMPAHLFIFRGMVKAIIKKSRRD
CEEEEEEECCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]